RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 BRD1O95696 1058 aa17.75■□□□□ 0.43
PRKN-204ENST00000366896 TEFQ10587 303 aa17.75■□□□□ 0.43
PRKN-204ENST00000366896 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
PRKN-204ENST00000366896 IL1RAPL2Q9NP60 686 aa17.75■□□□□ 0.43
PRKN-204ENST00000366896 TOGARAM1Q9Y4F4 1720 aa17.75■□□□□ 0.43
PRKN-204ENST00000366896 MBD3O95983 291 aa17.75■□□□□ 0.43
PRKN-204ENST00000366896 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
PRKN-204ENST00000366896 HOXB7P09629 217 aa17.74■□□□□ 0.43
PRKN-204ENST00000366896 ZNF772Q68DY9 489 aaPredicted RBP17.74■□□□□ 0.43
PRKN-204ENST00000366896 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
PRKN-204ENST00000366896 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
PRKN-204ENST00000366896 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
PRKN-204ENST00000366896 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
PRKN-204ENST00000366896 ONECUT3O60422 494 aaPredicted RBP17.73■□□□□ 0.43
PRKN-204ENST00000366896 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
PRKN-204ENST00000366896 UPF3BQ9BZI7 483 aaKnown RBP17.73■□□□□ 0.43
PRKN-204ENST00000366896 POLA2Q14181 598 aa17.72■□□□□ 0.43
PRKN-204ENST00000366896 MARCH10Q8NA82 808 aaPredicted RBP17.72■□□□□ 0.43
PRKN-204ENST00000366896 ERVV-2B6SEH9 535 aa17.71■□□□□ 0.43
PRKN-204ENST00000366896 MAP4K4O95819 1239 aaPredicted RBP17.71■□□□□ 0.43
PRKN-204ENST00000366896 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
PRKN-204ENST00000366896 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
PRKN-204ENST00000366896 A0A0G2JS52 829 aa17.71■□□□□ 0.43
PRKN-204ENST00000366896 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
PRKN-204ENST00000366896 CABP4P57796 275 aa17.7■□□□□ 0.42
PRKN-204ENST00000366896 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
PRKN-204ENST00000366896 HSPA4P34932 840 aa17.7■□□□□ 0.42
PRKN-204ENST00000366896 SURF6O75683 361 aaKnown RBP17.69■□□□□ 0.42
PRKN-204ENST00000366896 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
PRKN-204ENST00000366896 ITGB4P16144 1822 aa17.69■□□□□ 0.42
PRKN-204ENST00000366896 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
PRKN-204ENST00000366896 RNF214Q8ND24 703 aa17.68■□□□□ 0.42
PRKN-204ENST00000366896 KCNQ3O43525 872 aa17.68■□□□□ 0.42
PRKN-204ENST00000366896 SEPT12Q8IYM1 358 aa17.68■□□□□ 0.42
PRKN-204ENST00000366896 PI4K2BQ8TCG2 481 aa17.68■□□□□ 0.42
PRKN-204ENST00000366896 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
PRKN-204ENST00000366896 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
PRKN-204ENST00000366896 NBPF7P0C2Y1 421 aaPredicted RBP17.67■□□□□ 0.42
PRKN-204ENST00000366896 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
PRKN-204ENST00000366896 KIAA2012Q0VF49 1180 aa17.67■□□□□ 0.42
PRKN-204ENST00000366896 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
PRKN-204ENST00000366896 TSPY26PQ9H489 355 aa17.67■□□□□ 0.42
PRKN-204ENST00000366896 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
PRKN-204ENST00000366896 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
PRKN-204ENST00000366896 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
PRKN-204ENST00000366896 SRGAP3O43295 1099 aa17.66■□□□□ 0.42
PRKN-204ENST00000366896 CHPF2Q9P2E5 772 aa17.66■□□□□ 0.42
PRKN-204ENST00000366896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRKN-204ENST00000366896 PAPPAQ13219 1627 aa17.66■□□□□ 0.42
PRKN-204ENST00000366896 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
PRKN-204ENST00000366896 FOXD4L6Q3SYB3 417 aaPredicted RBP17.66■□□□□ 0.42
PRKN-204ENST00000366896 FOXD4L3Q6VB84 417 aaPredicted RBP17.66■□□□□ 0.42
PRKN-204ENST00000366896 RAD50Q92878 1312 aa17.66■□□□□ 0.42
PRKN-204ENST00000366896 ANXA1P04083 346 aa17.65■□□□□ 0.42
PRKN-204ENST00000366896 SLC39A6Q13433 755 aa17.65■□□□□ 0.42
PRKN-204ENST00000366896 MYRIPQ8NFW9 859 aa17.65■□□□□ 0.42
PRKN-204ENST00000366896 SGSM2O43147 1006 aa17.65■□□□□ 0.42
PRKN-204ENST00000366896 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
PRKN-204ENST00000366896 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
PRKN-204ENST00000366896 ILDR1Q86SU0 546 aaPredicted RBP17.65■□□□□ 0.42
PRKN-204ENST00000366896 SYAP1Q96A49 352 aaPredicted RBP17.65■□□□□ 0.42
PRKN-204ENST00000366896 WDR33Q9C0J8 1336 aaKnown RBP17.65■□□□□ 0.42
PRKN-204ENST00000366896 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 KAT6BQ8WYB5 2073 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 BRWD3Q6RI45 1802 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 MTX1Q13505 466 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 BEND3Q5T5X7 828 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 TMEM87AQ8NBN3 555 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 CCDC94Q9BW85 323 aaPredicted RBP17.64■□□□□ 0.41
PRKN-204ENST00000366896 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
PRKN-204ENST00000366896 BCL9O00512 1426 aa17.63■□□□□ 0.41
PRKN-204ENST00000366896 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
PRKN-204ENST00000366896 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
PRKN-204ENST00000366896 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
PRKN-204ENST00000366896 PIGBQ92521 554 aa17.63■□□□□ 0.41
PRKN-204ENST00000366896 CNTROBQ8N137 903 aa17.63■□□□□ 0.41
PRKN-204ENST00000366896 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 HEG1Q9ULI3 1381 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 RPAP1Q9BWH6 1393 aaPredicted RBP17.62■□□□□ 0.41
PRKN-204ENST00000366896 POTEAQ6S8J7 498 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 PRIMPOLQ96LW4 560 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 TTC14Q96N46 770 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 SNX14Q9Y5W7 946 aa17.62■□□□□ 0.41
PRKN-204ENST00000366896 ADCY9O60503 1353 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
PRKN-204ENST00000366896 PHF14O94880 888 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 RXRBP28702 533 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 ACSBG1Q96GR2 724 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 LSG1Q9H089 658 aaKnown RBP17.61■□□□□ 0.41
PRKN-204ENST00000366896 UVSSAQ2YD98 709 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
PRKN-204ENST00000366896 ARID3AQ99856 593 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 LARP6Q9BRS8 491 aaKnown RBP17.61■□□□□ 0.41
PRKN-204ENST00000366896 HDAC5Q9UQL6 1122 aa17.61■□□□□ 0.41
PRKN-204ENST00000366896 FAM184AQ8NB25 1140 aa17.6■□□□□ 0.41
PRKN-204ENST00000366896 KCPQ6ZWJ8 1503 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms