RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 WWC1Q8IX03 1113 aa21.89■■□□□ 1.09
PRKN-202ENST00000366892 C8orf58Q8NAV2 365 aa21.89■■□□□ 1.09
PRKN-202ENST00000366892 UTP14AQ9BVJ6 771 aaKnown RBP21.89■■□□□ 1.09
PRKN-202ENST00000366892 TAOK3Q9H2K8 898 aa21.89■■□□□ 1.09
PRKN-202ENST00000366892 HYPKQ9NX55 129 aa21.89■■□□□ 1.09
PRKN-202ENST00000366892 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
PRKN-202ENST00000366892 NLRP10Q86W26 655 aa21.88■■□□□ 1.09
PRKN-202ENST00000366892 LTBP3Q9NS15 1303 aa21.87■■□□□ 1.09
PRKN-202ENST00000366892 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
PRKN-202ENST00000366892 SLC10A5Q5PT55 438 aa21.87■■□□□ 1.09
PRKN-202ENST00000366892 PLBD2Q8NHP8 589 aa21.87■■□□□ 1.09
PRKN-202ENST00000366892 HOXA10P31260 410 aaPredicted RBP21.86■■□□□ 1.09
PRKN-202ENST00000366892 CCDC93Q567U6 631 aa21.86■■□□□ 1.09
PRKN-202ENST00000366892 OLFM4Q6UX06 510 aa21.86■■□□□ 1.09
PRKN-202ENST00000366892 RIC1Q4ADV7 1423 aa21.86■■□□□ 1.09
PRKN-202ENST00000366892 C3orf67Q6ZVT6 689 aa21.85■■□□□ 1.09
PRKN-202ENST00000366892 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
PRKN-202ENST00000366892 RRAGCQ9HB90 399 aa21.85■■□□□ 1.09
PRKN-202ENST00000366892 FER1L6Q2WGJ9 1857 aa21.85■■□□□ 1.09
PRKN-202ENST00000366892 TNRC6CQ9HCJ0 1690 aaKnown RBP21.85■■□□□ 1.09
PRKN-202ENST00000366892 GLTPD2A6NH11 291 aa21.85■■□□□ 1.09
PRKN-202ENST00000366892 TOMM70O94826 608 aa21.85■■□□□ 1.09
PRKN-202ENST00000366892 NLRP3Q96P20 1036 aa21.85■■□□□ 1.09
PRKN-202ENST00000366892 TSPYL6Q8N831 410 aa21.84■■□□□ 1.09
PRKN-202ENST00000366892 TSR2Q969E8 191 aaKnown RBP21.84■■□□□ 1.09
PRKN-202ENST00000366892 TRMT112Q9UI30 125 aaKnown RBP21.84■■□□□ 1.09
PRKN-202ENST00000366892 SYNE4Q8N205 404 aa21.83■■□□□ 1.09
PRKN-202ENST00000366892 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
PRKN-202ENST00000366892 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.09
PRKN-202ENST00000366892 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.08
PRKN-202ENST00000366892 ARFGEF2Q9Y6D5 1785 aa21.82■■□□□ 1.08
PRKN-202ENST00000366892 RTKN2Q8IZC4 609 aa21.82■■□□□ 1.08
PRKN-202ENST00000366892 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
PRKN-202ENST00000366892 ISCA1Q9BUE6 129 aa21.82■■□□□ 1.08
PRKN-202ENST00000366892 CACNA1SQ13698 1873 aa21.82■■□□□ 1.08
PRKN-202ENST00000366892 FKBP4Q02790 459 aaKnown RBP eCLIP21.81■■□□□ 1.08
PRKN-202ENST00000366892 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
PRKN-202ENST00000366892 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
PRKN-202ENST00000366892 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
PRKN-202ENST00000366892 CCDC88AQ3V6T2 1871 aa21.81■■□□□ 1.08
PRKN-202ENST00000366892 ATP5J2-PTCD1G3V325 749 aa21.8■■□□□ 1.08
PRKN-202ENST00000366892 HCLS1P14317 486 aaPredicted RBP21.8■■□□□ 1.08
PRKN-202ENST00000366892 CCDC30Q5VVM6 783 aa21.8■■□□□ 1.08
PRKN-202ENST00000366892 DPY19L2Q6NUT2 758 aa21.8■■□□□ 1.08
PRKN-202ENST00000366892 FAM9BQ8IZU0 186 aa21.8■■□□□ 1.08
PRKN-202ENST00000366892 IL16Q14005 1332 aa21.8■■□□□ 1.08
PRKN-202ENST00000366892 SH3TC1Q8TE82 1336 aa21.8■■□□□ 1.08
PRKN-202ENST00000366892 CC2D2BQ6DHV5 1058 aa21.79■■□□□ 1.08
PRKN-202ENST00000366892 RIC3Q7Z5B4 369 aa21.79■■□□□ 1.08
PRKN-202ENST00000366892 C16orf71Q8IYS4 520 aaPredicted RBP21.79■■□□□ 1.08
PRKN-202ENST00000366892 ZNF277Q9NRM2 450 aaPredicted RBP21.79■■□□□ 1.08
PRKN-202ENST00000366892 HSPA6P17066 643 aa21.78■■□□□ 1.08
PRKN-202ENST00000366892 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
PRKN-202ENST00000366892 TRIM28Q13263 835 aaKnown RBP21.78■■□□□ 1.08
PRKN-202ENST00000366892 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
PRKN-202ENST00000366892 VEGFAP15692 232 aaPredicted RBP21.77■■□□□ 1.08
PRKN-202ENST00000366892 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
PRKN-202ENST00000366892 RBM46Q8TBY0 533 aaKnown RBP21.77■■□□□ 1.08
PRKN-202ENST00000366892 ANKRD36CQ5JPF3 1778 aa21.76■■□□□ 1.07
PRKN-202ENST00000366892 PPEF1O14829 653 aaPredicted RBP21.76■■□□□ 1.07
PRKN-202ENST00000366892 FAM89AQ96GI7 184 aa21.76■■□□□ 1.07
PRKN-202ENST00000366892 PSMD1Q99460 953 aa21.76■■□□□ 1.07
PRKN-202ENST00000366892 SNED1Q8TER0 1413 aa21.76■■□□□ 1.07
PRKN-202ENST00000366892 POTECB2RU33 542 aa21.75■■□□□ 1.07
PRKN-202ENST00000366892 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
PRKN-202ENST00000366892 SLC51AQ86UW1 340 aa21.75■■□□□ 1.07
PRKN-202ENST00000366892 ABCC4O15439 1325 aa21.75■■□□□ 1.07
PRKN-202ENST00000366892 GRIPAP1Q4V328 841 aa21.75■■□□□ 1.07
PRKN-202ENST00000366892 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
PRKN-202ENST00000366892 DICER1Q9UPY3 1922 aaKnown RBP21.75■■□□□ 1.07
PRKN-202ENST00000366892 DDNO94850 711 aaPredicted RBP21.74■■□□□ 1.07
PRKN-202ENST00000366892 IARSP41252 1262 aaKnown RBP21.74■■□□□ 1.07
PRKN-202ENST00000366892 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
PRKN-202ENST00000366892 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
PRKN-202ENST00000366892 BBOX1O75936 387 aa21.73■■□□□ 1.07
PRKN-202ENST00000366892 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
PRKN-202ENST00000366892 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
PRKN-202ENST00000366892 MYD88Q99836 296 aa21.73■■□□□ 1.07
PRKN-202ENST00000366892 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
PRKN-202ENST00000366892 STK31Q9BXU1 1019 aa21.72■■□□□ 1.07
PRKN-202ENST00000366892 FSTL1Q12841 308 aa21.71■■□□□ 1.07
PRKN-202ENST00000366892 METTL22Q9BUU2 404 aaPredicted RBP21.71■■□□□ 1.07
PRKN-202ENST00000366892 TMX4Q9H1E5 349 aaPredicted RBP21.71■■□□□ 1.07
PRKN-202ENST00000366892 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
PRKN-202ENST00000366892 SLC4A2P04920 1241 aa21.7■■□□□ 1.07
PRKN-202ENST00000366892 SF3B3Q15393 1217 aaKnown RBP21.7■■□□□ 1.07
PRKN-202ENST00000366892 ZBTB38Q8NAP3 1195 aaPredicted RBP21.7■■□□□ 1.07
PRKN-202ENST00000366892 MAP3K2Q9Y2U5 619 aa21.7■■□□□ 1.07
PRKN-202ENST00000366892 FZD9O00144 591 aa21.7■■□□□ 1.06
PRKN-202ENST00000366892 IRS4O14654 1257 aaPredicted RBP21.7■■□□□ 1.06
PRKN-202ENST00000366892 GRAPQ13588 217 aa21.7■■□□□ 1.06
PRKN-202ENST00000366892 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
PRKN-202ENST00000366892 SP8Q8IXZ3 490 aa21.7■■□□□ 1.06
PRKN-202ENST00000366892 CCDC191Q8NCU4 936 aa21.7■■□□□ 1.06
PRKN-202ENST00000366892 GRAPLQ8TC17 118 aaPredicted RBP21.7■■□□□ 1.06
PRKN-202ENST00000366892 PI4KAP2A4QPH2 592 aa21.69■■□□□ 1.06
PRKN-202ENST00000366892 EXOSC9Q06265 439 aaKnown RBP21.69■■□□□ 1.06
PRKN-202ENST00000366892 G2E3Q7L622 706 aa21.69■■□□□ 1.06
PRKN-202ENST00000366892 PI4KAP1Q8N8J0 262 aa21.69■■□□□ 1.06
PRKN-202ENST00000366892 JDP2Q8WYK2 163 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms