RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 CASC1Q6TDU7 716 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 FHDC1Q9C0D6 1143 aaPredicted RBP13.42□□□□□ -0.26
H3F3A-202ENST00000366814 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
H3F3A-202ENST00000366814 APBB1O00213 710 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 SSFA2P28290 1259 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
H3F3A-202ENST00000366814 BEND3Q5T5X7 828 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 LRRCC1Q9C099 1032 aa13.42□□□□□ -0.26
H3F3A-202ENST00000366814 AMIGO3Q86WK7 504 aa13.41□□□□□ -0.26
H3F3A-202ENST00000366814 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
H3F3A-202ENST00000366814 SYT17Q9BSW7 474 aa13.41□□□□□ -0.26
H3F3A-202ENST00000366814 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
H3F3A-202ENST00000366814 ADCY9O60503 1353 aa13.41□□□□□ -0.26
H3F3A-202ENST00000366814 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
H3F3A-202ENST00000366814 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
H3F3A-202ENST00000366814 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
H3F3A-202ENST00000366814 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
H3F3A-202ENST00000366814 ANXA1P04083 346 aa13.4□□□□□ -0.26
H3F3A-202ENST00000366814 TRAPPC3LQ5T215 181 aa13.4□□□□□ -0.26
H3F3A-202ENST00000366814 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
H3F3A-202ENST00000366814 MAP3K2Q9Y2U5 619 aa13.4□□□□□ -0.26
H3F3A-202ENST00000366814 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
H3F3A-202ENST00000366814 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
H3F3A-202ENST00000366814 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
H3F3A-202ENST00000366814 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
H3F3A-202ENST00000366814 IBTKQ9P2D0 1353 aaPredicted RBP13.39□□□□□ -0.27
H3F3A-202ENST00000366814 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 SMARCA5O60264 1052 aaPredicted RBP13.38□□□□□ -0.27
H3F3A-202ENST00000366814 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 NBR1Q14596 966 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 SSH3Q8TE77 659 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
H3F3A-202ENST00000366814 COL5A3P25940 1745 aaPredicted RBP13.38□□□□□ -0.27
H3F3A-202ENST00000366814 COL24A1Q17RW2 1714 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 GSPT1P15170 499 aaKnown RBP13.38□□□□□ -0.27
H3F3A-202ENST00000366814 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
H3F3A-202ENST00000366814 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
H3F3A-202ENST00000366814 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
H3F3A-202ENST00000366814 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
H3F3A-202ENST00000366814 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
H3F3A-202ENST00000366814 RFC4P35249 363 aa13.37□□□□□ -0.27
H3F3A-202ENST00000366814 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
H3F3A-202ENST00000366814 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
H3F3A-202ENST00000366814 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
H3F3A-202ENST00000366814 SRGAP3O43295 1099 aa13.36□□□□□ -0.27
H3F3A-202ENST00000366814 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
H3F3A-202ENST00000366814 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
H3F3A-202ENST00000366814 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
H3F3A-202ENST00000366814 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
H3F3A-202ENST00000366814 NBPF7P0C2Y1 421 aaPredicted RBP13.36□□□□□ -0.27
H3F3A-202ENST00000366814 PDE1AP54750 535 aa13.36□□□□□ -0.27
H3F3A-202ENST00000366814 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
H3F3A-202ENST00000366814 TJP1Q07157 1748 aa13.35□□□□□ -0.27
H3F3A-202ENST00000366814 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
H3F3A-202ENST00000366814 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
H3F3A-202ENST00000366814 MYL6BP14649 208 aa13.35□□□□□ -0.27
H3F3A-202ENST00000366814 PDIA6Q15084 440 aa13.35□□□□□ -0.27
H3F3A-202ENST00000366814 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
H3F3A-202ENST00000366814 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
H3F3A-202ENST00000366814 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
H3F3A-202ENST00000366814 AOX1Q06278 1338 aa13.34□□□□□ -0.27
H3F3A-202ENST00000366814 MX1P20591 662 aa13.34□□□□□ -0.27
H3F3A-202ENST00000366814 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
H3F3A-202ENST00000366814 KIF1BPQ96EK5 621 aa13.34□□□□□ -0.27
H3F3A-202ENST00000366814 CCDC87Q9NVE4 849 aa13.34□□□□□ -0.27
H3F3A-202ENST00000366814 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.27
H3F3A-202ENST00000366814 SDSP20132 328 aa13.33□□□□□ -0.27
H3F3A-202ENST00000366814 MTX1Q13505 466 aa13.33□□□□□ -0.27
H3F3A-202ENST00000366814 NLGN1Q8N2Q7 840 aa13.33□□□□□ -0.27
H3F3A-202ENST00000366814 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
H3F3A-202ENST00000366814 GRM8O00222 908 aa13.33□□□□□ -0.28
H3F3A-202ENST00000366814 STARD3NLO95772 234 aa13.33□□□□□ -0.28
H3F3A-202ENST00000366814 OS9Q13438 667 aaPredicted RBP13.33□□□□□ -0.28
H3F3A-202ENST00000366814 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
H3F3A-202ENST00000366814 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
H3F3A-202ENST00000366814 REC8O95072 547 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 GPR162Q16538 588 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
H3F3A-202ENST00000366814 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 UTYO14607 1347 aa13.32□□□□□ -0.28
H3F3A-202ENST00000366814 MMP10P09238 476 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
H3F3A-202ENST00000366814 NLGN2Q8NFZ4 835 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 METTL22Q9BUU2 404 aaPredicted RBP13.31□□□□□ -0.28
H3F3A-202ENST00000366814 STAP2Q9UGK3 403 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms