RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TYRO3Q06418 890 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 CEP152O94986 1710 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 STARD3NLO95772 234 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 MSH6P52701 1360 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 KIAA1328Q86T90 577 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
CDC42BPA-202ENST00000366764 PI4KAP2A4QPH2 592 aa13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 CHMLP26374 656 aa13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 PI4KAP1Q8N8J0 262 aa13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 IFIT1P09914 478 aaKnown RBP13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 CCDC102BQ68D86 513 aa13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 FAM83GA6ND36 823 aa13.65□□□□□ -0.22
CDC42BPA-202ENST00000366764 ANKRD24Q8TF21 1146 aa13.65□□□□□ -0.23
CDC42BPA-202ENST00000366764 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.23
CDC42BPA-202ENST00000366764 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 NAPBQ9H115 298 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 SKILP12757 684 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 CCDC102AQ96A19 550 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 MAP3K12Q12852 859 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 TNRQ92752 1358 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 ACEP12821 1306 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 CBX1P83916 185 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 SPA17Q15506 151 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
CDC42BPA-202ENST00000366764 ABCC4O15439 1325 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 MAP3K4Q9Y6R4 1608 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 YEATS4O95619 227 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 FSD2A1L4K1 749 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 ARFGAP3Q9NP61 516 aa13.63□□□□□ -0.23
CDC42BPA-202ENST00000366764 ZNF213O14771 459 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 KDM4AO75164 1064 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 SPAG1Q07617 926 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 NUP133Q8WUM0 1156 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 GRM8O00222 908 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 URI1O94763 535 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 NCOA7Q8NI08 942 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 ZMYND15Q9H091 742 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 TIGD1Q96MW7 591 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
CDC42BPA-202ENST00000366764 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 FAM114A1Q8IWE2 563 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 RAB34Q9BZG1 259 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 IGHMBP2P38935 993 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 IDH1O75874 414 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 TEX13AQ9BXU3 409 aaPredicted RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 SYKP43405 635 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 VPS36Q86VN1 386 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 ARAP3Q8WWN8 1544 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 ODF2Q5BJF6 829 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 MYO1BO43795 1136 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 IVLP07476 585 aa13.61□□□□□ -0.23
CDC42BPA-202ENST00000366764 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 CTCFLQ8NI51 663 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 ORC3Q9UBD5 711 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 CWC25Q9NXE8 425 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 LRP2BPQ9P2M1 347 aa13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 PPP1R9BQ96SB3 815 aa13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.232e-7■■□□□ 12.9
CDC42BPA-202ENST00000366764 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
CDC42BPA-202ENST00000366764 AMOTL2Q9Y2J4 779 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms