RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
YBX3-203ENST00000366286 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
YBX3-203ENST00000366286 NLRP10Q86W26 655 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 TSPYL6Q8N831 410 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 PLBD2Q8NHP8 589 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 UTP14AQ9BVJ6 771 aaKnown RBP13.41□□□□□ -0.26
YBX3-203ENST00000366286 HYPKQ9NX55 129 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 MYH3P11055 1940 aa13.41□□□□□ -0.26
YBX3-203ENST00000366286 IL16Q14005 1332 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 LTBP3Q9NS15 1303 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
YBX3-203ENST00000366286 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 WDR90Q96KV7 1748 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 KIF3CO14782 793 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 SOGA3Q5TF21 947 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 RPGRQ92834 1020 aaKnown RBP13.4□□□□□ -0.26
YBX3-203ENST00000366286 TAOK3Q9H2K8 898 aa13.4□□□□□ -0.26
YBX3-203ENST00000366286 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
YBX3-203ENST00000366286 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 C7orf43Q8WVR3 580 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 PHAXQ9H814 394 aaKnown RBP13.39□□□□□ -0.27
YBX3-203ENST00000366286 NMRK2Q9NPI5 230 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
YBX3-203ENST00000366286 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
YBX3-203ENST00000366286 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
YBX3-203ENST00000366286 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
YBX3-203ENST00000366286 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
YBX3-203ENST00000366286 ZNF428Q96B54 188 aa13.38□□□□□ -0.27
YBX3-203ENST00000366286 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
YBX3-203ENST00000366286 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
YBX3-203ENST00000366286 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
YBX3-203ENST00000366286 TWISTNBQ3B726 338 aaPredicted RBP13.37□□□□□ -0.27
YBX3-203ENST00000366286 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
YBX3-203ENST00000366286 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
YBX3-203ENST00000366286 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
YBX3-203ENST00000366286 TRMT112Q9UI30 125 aaKnown RBP13.37□□□□□ -0.27
YBX3-203ENST00000366286 COL4A1P02462 1669 aa13.37□□□□□ -0.27
YBX3-203ENST00000366286 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
YBX3-203ENST00000366286 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
YBX3-203ENST00000366286 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
YBX3-203ENST00000366286 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
YBX3-203ENST00000366286 SLC51AQ86UW1 340 aa13.36□□□□□ -0.27
YBX3-203ENST00000366286 WDR63Q8IWG1 891 aa13.36□□□□□ -0.27
YBX3-203ENST00000366286 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
YBX3-203ENST00000366286 ABCC4O15439 1325 aa13.36□□□□□ -0.27
YBX3-203ENST00000366286 COL4A5P29400 1685 aa13.35□□□□□ -0.27
YBX3-203ENST00000366286 SCN4AP35499 1836 aa13.35□□□□□ -0.27
YBX3-203ENST00000366286 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
YBX3-203ENST00000366286 PPEF1O14829 653 aaPredicted RBP13.35□□□□□ -0.27
YBX3-203ENST00000366286 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
YBX3-203ENST00000366286 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
YBX3-203ENST00000366286 CRAMP1Q96RY5 1269 aa13.35□□□□□ -0.27
YBX3-203ENST00000366286 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
YBX3-203ENST00000366286 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
YBX3-203ENST00000366286 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
YBX3-203ENST00000366286 MYD88Q99836 296 aa13.34□□□□□ -0.27
YBX3-203ENST00000366286 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
YBX3-203ENST00000366286 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
YBX3-203ENST00000366286 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
YBX3-203ENST00000366286 LTBP1Q14766 1721 aa13.33□□□□□ -0.27
YBX3-203ENST00000366286 DDX58O95786 925 aaKnown RBP13.33□□□□□ -0.28
YBX3-203ENST00000366286 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
YBX3-203ENST00000366286 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
YBX3-203ENST00000366286 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
YBX3-203ENST00000366286 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
YBX3-203ENST00000366286 RTL5Q5HYW3 569 aaPredicted RBP13.32□□□□□ -0.28
YBX3-203ENST00000366286 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
YBX3-203ENST00000366286 PSMD1Q99460 953 aa13.32□□□□□ -0.28
YBX3-203ENST00000366286 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
YBX3-203ENST00000366286 MAP3K2Q9Y2U5 619 aa13.32□□□□□ -0.28
YBX3-203ENST00000366286 ZNF521Q96K83 1311 aa13.32□□□□□ -0.28
YBX3-203ENST00000366286 TOMM70O94826 608 aa13.31□□□□□ -0.28
YBX3-203ENST00000366286 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
YBX3-203ENST00000366286 G2E3Q7L622 706 aa13.31□□□□□ -0.28
YBX3-203ENST00000366286 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
YBX3-203ENST00000366286 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
YBX3-203ENST00000366286 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
YBX3-203ENST00000366286 VAMP4O75379 141 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 GRAPQ13588 217 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
YBX3-203ENST00000366286 PI4KAP1Q8N8J0 262 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
YBX3-203ENST00000366286 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 GRAPLQ8TC17 118 aaPredicted RBP13.3□□□□□ -0.28
YBX3-203ENST00000366286 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 ATP6V0A2Q9Y487 856 aa13.3□□□□□ -0.28
YBX3-203ENST00000366286 FLIIQ13045 1269 aa13.29□□□□□ -0.28
YBX3-203ENST00000366286 GRIPAP1Q4V328 841 aa13.29□□□□□ -0.28
YBX3-203ENST00000366286 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
YBX3-203ENST00000366286 RBM46Q8TBY0 533 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms