RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
CSNK1E-202ENST00000366216 CAMTA2O94983 1202 aa14.65□□□□□ -0.06
CSNK1E-202ENST00000366216 HMOX1P09601 288 aa14.65□□□□□ -0.06
CSNK1E-202ENST00000366216 CCDC146Q8IYE0 955 aa14.65□□□□□ -0.06
CSNK1E-202ENST00000366216 GPC2Q8N158 579 aa14.65□□□□□ -0.06
CSNK1E-202ENST00000366216 ZNF496Q96IT1 587 aaPredicted RBP14.65□□□□□ -0.06
CSNK1E-202ENST00000366216 APAF1O14727 1248 aa14.64□□□□□ -0.07
CSNK1E-202ENST00000366216 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-202ENST00000366216 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.07
CSNK1E-202ENST00000366216 SLC51AQ86UW1 340 aa14.64□□□□□ -0.07
CSNK1E-202ENST00000366216 PNNQ9H307 717 aaKnown RBP14.64□□□□□ -0.07
CSNK1E-202ENST00000366216 FZD9O00144 591 aa14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 CA12O43570 354 aa14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 A1BGP04217 495 aa14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 MAP2K2P36507 400 aa14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 ZNF330Q9Y3S2 320 aaPredicted RBP14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 SALL2Q9Y467 1007 aaPredicted RBP14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 NUP98P52948 1817 aa14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 SNED1Q8TER0 1413 aa14.63□□□□□ -0.07
CSNK1E-202ENST00000366216 KCNQ3O43525 872 aa14.62□□□□□ -0.07
CSNK1E-202ENST00000366216 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
CSNK1E-202ENST00000366216 CST9Q5W186 159 aa14.62□□□□□ -0.07
CSNK1E-202ENST00000366216 RTKN2Q8IZC4 609 aa14.62□□□□□ -0.07
CSNK1E-202ENST00000366216 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
CSNK1E-202ENST00000366216 TLL2Q9Y6L7 1015 aa14.62□□□□□ -0.07
CSNK1E-202ENST00000366216 HEG1Q9ULI3 1381 aa14.61□□□□□ -0.07
CSNK1E-202ENST00000366216 AOC2O75106 756 aa14.61□□□□□ -0.07
CSNK1E-202ENST00000366216 NPR1P16066 1061 aa14.61□□□□□ -0.07
CSNK1E-202ENST00000366216 PIP4K2AP48426 406 aaPredicted RBP14.61□□□□□ -0.07
CSNK1E-202ENST00000366216 DGKZQ13574 1117 aa14.61□□□□□ -0.07
CSNK1E-202ENST00000366216 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
CSNK1E-202ENST00000366216 U2SURPO15042 1029 aaKnown RBP14.6□□□□□ -0.07
CSNK1E-202ENST00000366216 NEFLP07196 543 aa14.6□□□□□ -0.07
CSNK1E-202ENST00000366216 IL6STP40189 918 aaPredicted RBP14.6□□□□□ -0.07
CSNK1E-202ENST00000366216 CCDC27Q2M243 656 aa14.6□□□□□ -0.07
CSNK1E-202ENST00000366216 TTC5Q8N0Z6 440 aa14.6□□□□□ -0.07
CSNK1E-202ENST00000366216 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
CSNK1E-202ENST00000366216 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
CSNK1E-202ENST00000366216 KLRG2A4D1S0 409 aaPredicted RBP14.59□□□□□ -0.07
CSNK1E-202ENST00000366216 TRAF5O00463 557 aa14.59□□□□□ -0.07
CSNK1E-202ENST00000366216 LMOD1P29536 600 aaPredicted RBP14.59□□□□□ -0.07
CSNK1E-202ENST00000366216 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
CSNK1E-202ENST00000366216 TEX13AQ9BXU3 409 aaPredicted RBP14.59□□□□□ -0.07
CSNK1E-202ENST00000366216 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 ZNF790Q6PG37 636 aa14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 NBPF5PQ86XG9 351 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 SYNE4Q8N205 404 aa14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 JDP2Q8WYK2 163 aa14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 GJA3Q9Y6H8 435 aa14.58□□□□□ -0.08
CSNK1E-202ENST00000366216 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-202ENST00000366216 USP16Q9Y5T5 823 aa14.57□□□□□ -0.08
CSNK1E-202ENST00000366216 EPS15P42566 896 aa14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 SCNN1DP51172 638 aa14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 EIF6P56537 245 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 SLFN5Q08AF3 891 aa14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 USP50Q70EL3 339 aaPredicted RBP14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 SAPCD2Q86UD0 394 aa14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 WWC1Q8IX03 1113 aa14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 RSPH6AQ9H0K4 717 aa14.56□□□□□ -0.08
CSNK1E-202ENST00000366216 E9PSI1 815 aa14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 PRPF38BQ5VTL8 546 aaKnown RBP14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 DUSP27Q5VZP5 1158 aa14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 DZIP3Q86Y13 1208 aaKnown RBP14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 WDR63Q8IWG1 891 aa14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 HHIPL1Q96JK4 782 aa14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 PSMD1Q99460 953 aa14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 MAPK8IP3Q9UPT6 1336 aa14.55□□□□□ -0.08
CSNK1E-202ENST00000366216 ALDH1B1P30837 517 aa14.54□□□□□ -0.08
CSNK1E-202ENST00000366216 ERICH6BQ5W0A0 696 aa14.54□□□□□ -0.08
CSNK1E-202ENST00000366216 CIAPIN1Q6FI81 312 aa14.54□□□□□ -0.08
CSNK1E-202ENST00000366216 LAMB4A4D0S4 1761 aa14.54□□□□□ -0.08
CSNK1E-202ENST00000366216 NBPF26B4DH59 902 aa14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 CELF2O95319 508 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 NEFMP07197 916 aa14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 TMPOP42166 694 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 SOX10P56693 466 aa14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 NBPF10Q6P3W6 841 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 CLEC4GQ6UXB4 293 aa14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 NBPF15Q8N660 670 aa14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
CSNK1E-202ENST00000366216 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
CSNK1E-202ENST00000366216 TPTE2Q6XPS3 522 aa14.52□□□□□ -0.09
CSNK1E-202ENST00000366216 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
CSNK1E-202ENST00000366216 RCAN3Q9UKA8 241 aa14.52□□□□□ -0.09
CSNK1E-202ENST00000366216 ABCC12Q96J65 1359 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 FAM177BA6PVY3 158 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 TEFQ10587 303 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 HLFQ16534 295 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 ZIC5Q96T25 663 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 RRP7AQ9Y3A4 280 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 LAMB2P55268 1798 aa14.51□□□□□ -0.09
CSNK1E-202ENST00000366216 CC2D2BQ6DHV5 1058 aa14.5□□□□□ -0.09
CSNK1E-202ENST00000366216 LARGE2Q8N3Y3 721 aa14.5□□□□□ -0.09
CSNK1E-202ENST00000366216 ADARB2Q9NS39 739 aaKnown RBP14.5□□□□□ -0.09
CSNK1E-202ENST00000366216 NIP7Q9Y221 180 aaKnown RBP eCLIP14.5□□□□□ -0.09
CSNK1E-202ENST00000366216 NOGQ13253 232 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms