RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP249-201ENST00000365490 CASP7P55210 303 aa12.3□□□□□ -0.44
RN7SKP249-201ENST00000365490 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
RN7SKP249-201ENST00000365490 UBN2Q6ZU65 1347 aa12.3□□□□□ -0.44
RN7SKP249-201ENST00000365490 TM4SF1P30408 202 aa12.29□□□□□ -0.44
RN7SKP249-201ENST00000365490 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
RN7SKP249-201ENST00000365490 ZBTB38Q8NAP3 1195 aaPredicted RBP12.29□□□□□ -0.44
RN7SKP249-201ENST00000365490 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
RN7SKP249-201ENST00000365490 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 GPTP24298 496 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 SUSD4Q5VX71 490 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 NLGN1Q8N2Q7 840 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 KAZALD1Q96I82 304 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
RN7SKP249-201ENST00000365490 GNAI2P04899 355 aa12.27□□□□□ -0.45
RN7SKP249-201ENST00000365490 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP249-201ENST00000365490 NFIXQ14938 502 aa12.27□□□□□ -0.45
RN7SKP249-201ENST00000365490 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
RN7SKP249-201ENST00000365490 PCDHB15Q9Y5E8 787 aa12.27□□□□□ -0.45
RN7SKP249-201ENST00000365490 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.45
RN7SKP249-201ENST00000365490 NTSR2O95665 410 aa12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 SLC10A5Q5PT55 438 aa12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 UBE3BQ7Z3V4 1068 aa12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 UTP14AQ9BVJ6 771 aaKnown RBP12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 PLA2G12BQ9BX93 195 aa12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
RN7SKP249-201ENST00000365490 MTX1Q13505 466 aa12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 RPAP2Q8IXW5 612 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 PPP4R2Q9NY27 417 aa12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 CARMIL3Q8ND23 1372 aa12.25□□□□□ -0.45
RN7SKP249-201ENST00000365490 MSH5O43196 834 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 FOXO4P98177 505 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 CEP85Q6P2H3 762 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 TPTE2Q6XPS3 522 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 CASZ1Q86V15 1759 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 SYNE4Q8N205 404 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 JARID2Q92833 1246 aaPredicted RBP12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 SUCLG2Q96I99 432 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
RN7SKP249-201ENST00000365490 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 CSF1RP07333 972 aa12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 DDR1Q08345 913 aa12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 EPHA10Q5JZY3 1008 aa12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 BICDL1Q6ZP65 573 aa12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 C1orf115Q9H7X2 142 aa12.23□□□□□ -0.45
RN7SKP249-201ENST00000365490 IRS4O14654 1257 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP249-201ENST00000365490 HSP90B1P14625 803 aaKnown RBP12.22□□□□□ -0.45
RN7SKP249-201ENST00000365490 NBPF5PQ86XG9 351 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP249-201ENST00000365490 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
RN7SKP249-201ENST00000365490 LAMB2P55268 1798 aa12.22□□□□□ -0.45
RN7SKP249-201ENST00000365490 DDX60Q8IY21 1712 aaKnown RBP12.22□□□□□ -0.45
RN7SKP249-201ENST00000365490 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 PDE8AO60658 829 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 IGHDP01880 384 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 SERPINB2P05120 415 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 POLA2Q14181 598 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 ERFEQ4G0M1 354 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 SSH3Q8TE77 659 aa12.21□□□□□ -0.45
RN7SKP249-201ENST00000365490 MYH3P11055 1940 aa12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 MMP10P09238 476 aa12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 R3HDM1Q15032 1099 aaKnown RBP12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
RN7SKP249-201ENST00000365490 RTL9Q8NET4 1388 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 KLRG2A4D1S0 409 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 CTSWP56202 376 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 LMBR1LQ6UX01 489 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 CNBD1Q8NA66 436 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
RN7SKP249-201ENST00000365490 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 HMMRO75330 724 aa12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 MSL1Q68DK7 614 aa12.18□□□□□ -0.46
RN7SKP249-201ENST00000365490 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms