RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 RESTQ13127 1097 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 TRIM28Q13263 835 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 NMIQ13287 307 aaPredicted RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SLC39A6Q13433 755 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SNW1Q13573 536 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SLFNL1Q499Z3 407 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 CAVIN1Q6NZI2 390 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 ZNF530Q6P9A1 599 aaPredicted RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 COPS6Q7L5N1 327 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 KRT28Q7Z3Y7 464 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 ZNF710Q8N1W2 664 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 KLHDC4Q8TBB5 520 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 UBE2Q2Q8WVN8 375 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 RTF1Q92541 710 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 EVI5LQ96CN4 794 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 EDC3Q96F86 508 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 LTV1Q96GA3 475 aaPredicted RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SLC4A9Q96Q91 983 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SEC62Q99442 399 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 HAUS7Q99871 368 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 LARP6Q9BRS8 491 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 ISCA1Q9BUE6 129 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 PLA2G12BQ9BX93 195 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 STK31Q9BXU1 1019 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 NBPF3Q9H094 633 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 BICC1Q9H694 974 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 GDPD2Q9HCC8 539 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 GPR108Q9NPR9 543 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 FAM53CQ9NYF3 392 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 LIMCH1Q9UPQ0 1083 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SPG7Q9UQ90 795 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 CNPY2Q9Y2B0 182 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 ZKSCAN5Q9Y2L8 839 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 RBM8AQ9Y5S9 174 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 TACC3Q9Y6A5 838 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 DDX49Q9Y6V7 483 aaKnown RBP2.12□□□□□ -2.07
SNORD48-201ENST00000364953 STRCP1A6NGW2 1772 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 PAPPAQ13219 1627 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 SPATA31A3Q5VYP0 1347 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 C5P01031 1676 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 KIF1AQ12756 1690 aa2.12□□□□□ -2.07
SNORD48-201ENST00000364953 PKD1L3Q7Z443 1732 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 FAM237AA0A1B0GTK4 181 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 APBB1O00213 710 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ZBTB22O15209 634 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 CTIFO43310 598 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 STX6O43752 255 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 PFKFB2O60825 505 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 KDM4AO75164 1064 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 MBD3O95983 291 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 CYP21A2P08686 494 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 PRKCSHP14314 528 aaPredicted RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 HCLS1P14317 486 aaPredicted RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 LIG1P18858 919 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 EIF2S2P20042 333 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 RPS6KB1P23443 525 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 GJB2P29033 226 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 UBE2HP62256 183 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 DNM1Q05193 864 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 IQCB1Q15051 598 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 HSP90AB4PQ58FF6 505 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 TNNI3KQ59H18 835 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ESCO1Q5FWF5 840 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ZMYM1Q5SVZ6 1142 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 PRPF40BQ6NWY9 871 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 FAM173BQ6P4H8 233 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 LARP1Q6PKG0 1096 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 CWC27Q6UX04 472 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 TTLL7Q6ZT98 887 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 CDC37L1Q7L3B6 337 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 PLA2G4DQ86XP0 818 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 CNTROBQ8N137 903 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 VGLL2Q8N8G2 317 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 NECAB1Q8N987 351 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 NFATC2IPQ8NCF5 419 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 RGS22Q8NE09 1264 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 NSUN7Q8NE18 718 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 KIAA1524Q8TCG1 905 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 XAGE3Q8WTP9 111 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 PIBF1Q8WXW3 757 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 JARID2Q92833 1246 aaPredicted RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 DDX17Q92841 729 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 GTF3C6Q969F1 213 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 RILPL2Q969X0 211 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 SHISA4Q96DD7 197 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ZSCAN31Q96LW9 406 aaPredicted RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 DBNDD2Q9BQY9 259 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 CCDC8Q9H0W5 538 aaPredicted RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 HSD3B7Q9H2F3 369 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ESF1Q9H501 851 aaKnown RBP2.11□□□□□ -2.07
SNORD48-201ENST00000364953 C19orf44Q9H6X5 657 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ANO2Q9NQ90 1003 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 KCND1Q9NSA2 647 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 ATG3Q9NT62 314 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 RCOR1Q9UKL0 485 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 HPS5Q9UPZ3 1129 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 MRVI1Q9Y6F6 885 aa2.11□□□□□ -2.07
SNORD48-201ENST00000364953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms