RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CERKQ8TCT0 537 aa22.74■■□□□ 1.23
CMTM3-201ENST00000361909 ZNF830Q96NB3 372 aaPredicted RBP22.74■■□□□ 1.23
CMTM3-201ENST00000361909 FUCA2Q9BTY2 467 aa22.74■■□□□ 1.23
CMTM3-201ENST00000361909 SHANK3Q9BYB0 1731 aa22.73■■□□□ 1.23
CMTM3-201ENST00000361909 NFATC2IPQ8NCF5 419 aa22.73■■□□□ 1.23
CMTM3-201ENST00000361909 ZNF790Q6PG37 636 aa22.73■■□□□ 1.23
CMTM3-201ENST00000361909 MEIS3Q99687 375 aa22.73■■□□□ 1.23
CMTM3-201ENST00000361909 ERVV-2B6SEH9 535 aa22.72■■□□□ 1.23
CMTM3-201ENST00000361909 ZSCAN22P10073 491 aaPredicted RBP22.72■■□□□ 1.23
CMTM3-201ENST00000361909 CHMLP26374 656 aa22.72■■□□□ 1.23
CMTM3-201ENST00000361909 CCT4P50991 539 aaKnown RBP22.72■■□□□ 1.23
CMTM3-201ENST00000361909 DISP2A7MBM2 1401 aa22.72■■□□□ 1.23
CMTM3-201ENST00000361909 RIOK3O14730 519 aaKnown RBP22.72■■□□□ 1.23
CMTM3-201ENST00000361909 GIGYF1O75420 1035 aaPredicted RBP22.72■■□□□ 1.23
CMTM3-201ENST00000361909 TSC1Q92574 1164 aa22.72■■□□□ 1.23
CMTM3-201ENST00000361909 OGFRQ9NZT2 677 aa22.72■■□□□ 1.23
CMTM3-201ENST00000361909 PALD1Q9ULE6 856 aa22.72■■□□□ 1.23
CMTM3-201ENST00000361909 GABPB1Q06547 395 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-201ENST00000361909 ANO2Q9NQ90 1003 aa22.71■■□□□ 1.23
CMTM3-201ENST00000361909 STAP2Q9UGK3 403 aa22.71■■□□□ 1.23
CMTM3-201ENST00000361909 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-201ENST00000361909 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
CMTM3-201ENST00000361909 JCADQ9P266 1359 aa22.71■■□□□ 1.23
CMTM3-201ENST00000361909 NRAPQ86VF7 1730 aa22.7■■□□□ 1.23
CMTM3-201ENST00000361909 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
CMTM3-201ENST00000361909 CABP4P57796 275 aa22.7■■□□□ 1.22
CMTM3-201ENST00000361909 FLIIQ13045 1269 aa22.7■■□□□ 1.22
CMTM3-201ENST00000361909 G2E3Q7L622 706 aa22.7■■□□□ 1.22
CMTM3-201ENST00000361909 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.7■■□□□ 1.22
CMTM3-201ENST00000361909 GDPD2Q9HCC8 539 aa22.69■■□□□ 1.22
CMTM3-201ENST00000361909 APBB1O00213 710 aa22.69■■□□□ 1.22
CMTM3-201ENST00000361909 LRRCC1Q9C099 1032 aa22.69■■□□□ 1.22
CMTM3-201ENST00000361909 THRAP3Q9Y2W1 955 aaKnown RBP22.69■■□□□ 1.22
CMTM3-201ENST00000361909 HSPA4P34932 840 aa22.68■■□□□ 1.22
CMTM3-201ENST00000361909 JARID2Q92833 1246 aaPredicted RBP22.68■■□□□ 1.22
CMTM3-201ENST00000361909 CDCA7Q9BWT1 371 aaPredicted RBP22.68■■□□□ 1.22
CMTM3-201ENST00000361909 KCNF1Q9H3M0 494 aa22.67■■□□□ 1.22
CMTM3-201ENST00000361909 PDIA4P13667 645 aaKnown RBP22.67■■□□□ 1.22
CMTM3-201ENST00000361909 C17orf53Q8N3J3 647 aaPredicted RBP22.67■■□□□ 1.22
CMTM3-201ENST00000361909 CNPY2Q9Y2B0 182 aa22.67■■□□□ 1.22
CMTM3-201ENST00000361909 SLIT2O94813 1529 aa22.67■■□□□ 1.22
CMTM3-201ENST00000361909 CCDC192P0DO97 292 aa22.66■■□□□ 1.22
CMTM3-201ENST00000361909 EIF2S2P20042 333 aaKnown RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 NECTIN2Q92692 538 aa22.66■■□□□ 1.22
CMTM3-201ENST00000361909 DBF4Q9UBU7 674 aaPredicted RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 WNK3Q9BYP7 1800 aa22.66■■□□□ 1.22
CMTM3-201ENST00000361909 NUTM2BA6NNL0 878 aaPredicted RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 NUTM2EB1AL46 878 aaPredicted RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 STX6O43752 255 aa22.66■■□□□ 1.22
CMTM3-201ENST00000361909 F13A1P00488 732 aa22.66■■□□□ 1.22
CMTM3-201ENST00000361909 GNAI2P04899 355 aa22.66■■□□□ 1.22
CMTM3-201ENST00000361909 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 DDX54Q8TDD1 881 aaKnown RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 CGNQ9P2M7 1197 aaKnown RBP22.66■■□□□ 1.22
CMTM3-201ENST00000361909 SMTNL1A8MU46 457 aa22.65■■□□□ 1.22
CMTM3-201ENST00000361909 TTC5Q8N0Z6 440 aa22.65■■□□□ 1.22
CMTM3-201ENST00000361909 PYCARDQ9ULZ3 195 aa22.65■■□□□ 1.22
CMTM3-201ENST00000361909 SLC39A6Q13433 755 aa22.65■■□□□ 1.22
CMTM3-201ENST00000361909 SPATA31A1Q5TZJ5 1347 aa22.64■■□□□ 1.22
CMTM3-201ENST00000361909 PXDNLA1KZ92 1463 aa22.64■■□□□ 1.21
CMTM3-201ENST00000361909 CHPF2Q9P2E5 772 aa22.63■■□□□ 1.21
CMTM3-201ENST00000361909 U2AF2P26368 475 aaKnown RBP eCLIP22.63■■□□□ 1.21
CMTM3-201ENST00000361909 FMNL2Q96PY5 1086 aa22.63■■□□□ 1.21
CMTM3-201ENST00000361909 SPATA31A6Q5VVP1 1343 aa22.63■■□□□ 1.21
CMTM3-201ENST00000361909 NOL8Q76FK4 1167 aaKnown RBP22.62■■□□□ 1.21
CMTM3-201ENST00000361909 FAM200AQ8TCP9 573 aa22.62■■□□□ 1.21
CMTM3-201ENST00000361909 UPF3BQ9BZI7 483 aaKnown RBP22.62■■□□□ 1.21
CMTM3-201ENST00000361909 PAXBP1Q9Y5B6 917 aa22.62■■□□□ 1.21
CMTM3-201ENST00000361909 RAD50Q92878 1312 aa22.62■■□□□ 1.21
CMTM3-201ENST00000361909 A0A0U1RQG5 324 aaPredicted RBP22.62■■□□□ 1.21
CMTM3-201ENST00000361909 EXOC5O00471 708 aa22.62■■□□□ 1.21
CMTM3-201ENST00000361909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.62■■□□□ 1.21
CMTM3-201ENST00000361909 ZNF496Q96IT1 587 aaPredicted RBP22.62■■□□□ 1.21
CMTM3-201ENST00000361909 TRIM6-TRIM34B2RNG4 842 aa22.61■■□□□ 1.21
CMTM3-201ENST00000361909 GNAI3P08754 354 aa22.61■■□□□ 1.21
CMTM3-201ENST00000361909 SNRPA1P09661 255 aaKnown RBP22.61■■□□□ 1.21
CMTM3-201ENST00000361909 FGD1P98174 961 aa22.61■■□□□ 1.21
CMTM3-201ENST00000361909 NCBP1Q09161 790 aaKnown RBP22.61■■□□□ 1.21
CMTM3-201ENST00000361909 MPNDQ8N594 471 aa22.61■■□□□ 1.21
CMTM3-201ENST00000361909 TTC14Q96N46 770 aa22.61■■□□□ 1.21
CMTM3-201ENST00000361909 LIMCH1Q9UPQ0 1083 aa22.61■■□□□ 1.21
CMTM3-201ENST00000361909 SYT1P21579 422 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 FAM193AP78312 1265 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 SMC3Q9UQE7 1217 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 SPATA31A5Q5VU36 1347 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 SPATA31A7Q8IWB4 1347 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 SPDYE4A6NLX3 237 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 PHAXQ9H814 394 aaKnown RBP22.6■■□□□ 1.21
CMTM3-201ENST00000361909 CCDC171Q6TFL3 1326 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 PAPPAQ13219 1627 aa22.6■■□□□ 1.21
CMTM3-201ENST00000361909 LRP6O75581 1613 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 F6X3S4 739 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 RILPL2Q969X0 211 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 CTNNA3Q9UI47 895 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 UBR2Q8IWV8 1755 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 C5P01031 1676 aa22.59■■□□□ 1.21
CMTM3-201ENST00000361909 FOXD4L6Q3SYB3 417 aaPredicted RBP22.59■■□□□ 1.21
CMTM3-201ENST00000361909 FOXD4L3Q6VB84 417 aaPredicted RBP22.59■■□□□ 1.21
CMTM3-201ENST00000361909 BARGINQ6ZT62 677 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms