RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.55
SIN3A-201ENST00000360439 A0A087WZG4 1122 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 TTC22Q5TAA0 569 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 EFCC1Q9HA90 598 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 F6X3S4 739 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 GNPATO15228 680 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 WDR33Q9C0J8 1336 aaKnown RBP11.64□□□□□ -0.55
SIN3A-201ENST00000360439 WASHC4Q2M389 1173 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 AGLP35573 1532 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
SIN3A-201ENST00000360439 HS1BP3Q53T59 392 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 QRICH2Q9H0J4 1663 aa11.64□□□□□ -0.55
SIN3A-201ENST00000360439 KDM4AO75164 1064 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
SIN3A-201ENST00000360439 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
SIN3A-201ENST00000360439 INO80Q9ULG1 1556 aaPredicted RBP11.63□□□□□ -0.55
SIN3A-201ENST00000360439 SRGAP3O43295 1099 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 RBM5P52756 815 aaKnown RBP eCLIP11.63□□□□□ -0.55
SIN3A-201ENST00000360439 AP1ARQ63HQ0 302 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 CNTROBQ8N137 903 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 ANKIB1Q9P2G1 1089 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
SIN3A-201ENST00000360439 E2F4Q16254 413 aa11.63□□□□□ -0.55
SIN3A-201ENST00000360439 PRPF38AQ8NAV1 312 aaKnown RBP11.63□□□□□ -0.55
SIN3A-201ENST00000360439 DYDC1Q8WWB3 177 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 AFF2P51816 1311 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
SIN3A-201ENST00000360439 UNC5CLQ8IV45 518 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
SIN3A-201ENST00000360439 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 FAM135BQ49AJ0 1406 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 ADGRL3Q9HAR2 1447 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 CAMSAP1Q5T5Y3 1602 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 USP32Q8NFA0 1604 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 NEK4P51957 841 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 DEPDC5O75140 1603 aa11.62□□□□□ -0.55
SIN3A-201ENST00000360439 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
SIN3A-201ENST00000360439 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
SIN3A-201ENST00000360439 GEMIN8Q9NWZ8 242 aaKnown RBP11.61□□□□□ -0.55
SIN3A-201ENST00000360439 SMC3Q9UQE7 1217 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 SPATA31A3Q5VYP0 1347 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 REREQ9P2R6 1566 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 TRIM37O94972 964 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 HIP1O00291 1037 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 TRAPPC3LQ5T215 181 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 NOL8Q76FK4 1167 aaKnown RBP11.61□□□□□ -0.55
SIN3A-201ENST00000360439 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 PPP1R42Q7Z4L9 355 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 CCAR2Q8N163 923 aaKnown RBP11.61□□□□□ -0.55
SIN3A-201ENST00000360439 MED14O60244 1454 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 KIDINS220Q9ULH0 1771 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 FLIIQ13045 1269 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 CCDC158Q5M9N0 1113 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 ARHGEF25Q86VW2 580 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 CREBRFQ8IUR6 639 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 JARID2Q92833 1246 aaPredicted RBP11.61□□□□□ -0.55
SIN3A-201ENST00000360439 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 ANTXR1Q9H6X2 564 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 TNNQ9UQP3 1299 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
SIN3A-201ENST00000360439 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 SSFA2P28290 1259 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 IL13P35225 146 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 ST5P78524 1137 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 GOPCQ9HD26 462 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 KRT222Q8N1A0 295 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 NIP7Q9Y221 180 aaKnown RBP eCLIP11.6□□□□□ -0.55
SIN3A-201ENST00000360439 NRXN1Q9ULB1 1477 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 TPM1P09493 284 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
SIN3A-201ENST00000360439 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 SART3Q15020 963 aaKnown RBP11.6□□□□□ -0.55
SIN3A-201ENST00000360439 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
SIN3A-201ENST00000360439 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
SIN3A-201ENST00000360439 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
SIN3A-201ENST00000360439 MYO3AQ8NEV4 1616 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 A0A1B0GUL7 405 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 RAB11FIP3O75154 756 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-201ENST00000360439 TPM4P67936 248 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 ERC1Q8IUD2 1116 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms