RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 CCDC173Q0VFZ6 552 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 NECTIN1Q15223 517 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 COPS6Q7L5N1 327 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 TLR7Q9NYK1 1049 aaKnown RBP8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 USP16Q9Y5T5 823 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 KCPQ6ZWJ8 1503 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 WDR33Q9C0J8 1336 aaKnown RBP8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 NEXNQ0ZGT2 675 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 G3BP1Q13283 466 aaKnown RBP eCLIP8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 KIAA1211Q6ZU35 1233 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 CADPS2Q86UW7 1296 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 TMEM87AQ8NBN3 555 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 MYD88Q99836 296 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 COPRSQ9NQ92 184 aa8.51□□□□□ -1.05
KCNIP4-201ENST00000359001 MYL6BP14649 208 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 CASP7P55210 303 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 ST3GAL1Q11201 340 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 CHRNA2Q15822 529 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 FMNL2Q96PY5 1086 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 ZSWIM6Q9HCJ5 1215 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 LIMCH1Q9UPQ0 1083 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 RFX7Q2KHR2 1363 aa8.5□□□□□ -1.05
KCNIP4-201ENST00000359001 HIP1O00291 1037 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 LARGE1O95461 756 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 PRIM1P49642 420 aaKnown RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 ADCK5Q3MIX3 580 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 VPS53Q5VIR6 699 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 LRSAM1Q6UWE0 723 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 ANKRD13DQ6ZTN6 518 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 FOXD4L4Q8WXT5 416 aaPredicted RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 MAP4K1Q92918 833 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 CCDC8Q9H0W5 538 aaPredicted RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 TOGARAM1Q9Y4F4 1720 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 ESPNB1AK53 854 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 CASTP20810 708 aaKnown RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 PRPF40BQ6NWY9 871 aaKnown RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 TTC5Q8N0Z6 440 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 KLHDC4Q8TBB5 520 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 PDLIM2Q96JY6 352 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 FAM227BQ96M60 508 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 RBM8AQ9Y5S9 174 aaKnown RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 COL5A2P05997 1499 aaPredicted RBP8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 TNS2Q63HR2 1409 aa8.49□□□□□ -1.05
KCNIP4-201ENST00000359001 A0A0D9SFI3 127 aa8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 CPA1P15085 419 aa8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 CREB3L3Q68CJ9 461 aa8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 SIL1Q9H173 461 aa8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 ZSCAN22P10073 491 aaPredicted RBP8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 PIP4K2AP48426 406 aaPredicted RBP8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 JAKMIP1Q96N16 626 aaKnown RBP8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 DBNLQ9UJU6 430 aaKnown RBP8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.48□□□□□ -1.05
KCNIP4-201ENST00000359001 WDR17Q8IZU2 1322 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 SYCE3A1L190 88 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 SLC27A2O14975 620 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 STX6O43752 255 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 ATP5JP18859 108 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 SYT1P21579 422 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 CABP4P57796 275 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 TNNI3KQ59H18 835 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 ZSCAN31Q96LW9 406 aaPredicted RBP8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 BOLA2Q9H3K6 86 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 SH2B1Q9NRF2 756 aaPredicted RBP8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 PDRG1Q9NUG6 133 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 CYP46A1Q9Y6A2 500 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 FPGT-TNNI3KV9GXZ4 949 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 STRCQ7RTU9 1775 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
KCNIP4-201ENST00000359001 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 F13A1P00488 732 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 COL9A3Q14050 684 aaPredicted RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 TSGA10IPQ3SY00 556 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 BRINP3Q76B58 766 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 UBE3BQ7Z3V4 1068 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 USP48Q86UV5 1035 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 ALDH8A1Q9H2A2 487 aaPredicted RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 ANO8Q9HCE9 1232 aaPredicted RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 SPEF2Q9C093 1822 aa8.46□□□□□ -1.05
KCNIP4-201ENST00000359001 ME3Q16798 604 aa8.46□□□□□ -1.06
KCNIP4-201ENST00000359001 ZNF589Q86UQ0 364 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms