RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 NR1I2O75469 434 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 IGHA1P01876 353 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 MCM4P33991 863 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 ARID3AQ99856 593 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 TTC21BQ7Z4L5 1316 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 COL22A1Q8NFW1 1626 aaPredicted RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 IBTKQ9P2D0 1353 aaPredicted RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 DPYSL4O14531 572 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 SMPD1P17405 629 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 RASSF7Q02833 373 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 KMT5BQ4FZB7 885 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 PAXIP1Q6ZW49 1069 aaPredicted RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 NSD3Q9BZ95 1437 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 TNKS1BP1Q9C0C2 1729 aaKnown RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 PARP4Q9UKK3 1724 aaKnown RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 NPHP3Q7Z494 1330 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 LRRC37A3O60309 1634 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 CACNA1FO60840 1977 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 OVOS2A0A0J9YW53 1432 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 OVOS2Q6IE36 1432 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 ZSCAN20P17040 1043 aaPredicted RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 C20orf194Q5TEA3 1177 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 SNIP1Q8TAD8 396 aaKnown RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 PANK3Q9H999 370 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 BABAM1Q9NWV8 329 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 C1orf167Q5SNV9 1468 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 LMO7Q8WWI1 1683 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 USP6P35125 1406 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 NCAPD2Q15021 1401 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 GIGYF1O75420 1035 aaPredicted RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 VPS72Q15906 364 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 MTERF4Q7Z6M4 381 aaKnown RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 TMEM51Q9NW97 253 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 ISY1Q9ULR0 285 aaKnown RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 MAP2P11137 1827 aaKnown RBP4.99□□□□□ -1.61
CNGA1-201ENST00000358519 ADAMTS7Q9UKP4 1686 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 SBNO1A3KN83 1393 aa4.99□□□□□ -1.61
CNGA1-201ENST00000358519 KCNQ2O43526 872 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 R3HCC1Q9Y3T6 440 aaKnown RBP4.98□□□□□ -1.61
CNGA1-201ENST00000358519 LMOD3Q0VAK6 560 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 NKX1-1Q15270 411 aaPredicted RBP4.98□□□□□ -1.61
CNGA1-201ENST00000358519 ZSCAN30Q86W11 494 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 WDR63Q8IWG1 891 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 TTC13Q8NBP0 860 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 GLI3P10071 1580 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 A0A1W2PP64 1363 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 PLCH1Q4KWH8 1693 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 DISP2A7MBM2 1401 aa4.98□□□□□ -1.61
CNGA1-201ENST00000358519 BRWD3Q6RI45 1802 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 PPP2R1AP30153 589 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 TNNT2P45379 298 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 PLCB2Q00722 1185 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 POLR3GLQ9BT43 218 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 ARHGEF10O15013 1369 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 SLIT2O94813 1529 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 UQCRHLA0A096LP55 91 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 RNF225M0QZC1 329 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 HTATSF1O43719 755 aaKnown RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 UQCRHP07919 91 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 MSNP26038 577 aaKnown RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 GAS2L3Q86XJ1 694 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 SPRYD3Q8NCJ5 442 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 ANP32BQ92688 251 aaKnown RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 ZNF830Q96NB3 372 aaPredicted RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 TBC1D2Q9BYX2 928 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 VIRMAQ69YN4 1812 aaKnown RBP4.97□□□□□ -1.61
CNGA1-201ENST00000358519 METP08581 1390 aa4.97□□□□□ -1.61
CNGA1-201ENST00000358519 LTN1O94822 1766 aa4.96□□□□□ -1.61
CNGA1-201ENST00000358519 VGLL3A8MV65 326 aa4.96□□□□□ -1.61
CNGA1-201ENST00000358519 KIF20AO95235 890 aa4.96□□□□□ -1.61
CNGA1-201ENST00000358519 WDR43Q15061 677 aaKnown RBP eCLIP4.96□□□□□ -1.61
CNGA1-201ENST00000358519 EZH2Q15910 746 aaKnown RBP4.96□□□□□ -1.61
CNGA1-201ENST00000358519 PSMG3-AS1Q96PY0 264 aa4.96□□□□□ -1.61
CNGA1-201ENST00000358519 ORAI2Q96SN7 254 aa4.96□□□□□ -1.61
CNGA1-201ENST00000358519 CCDC94Q9BW85 323 aaPredicted RBP4.96□□□□□ -1.61
CNGA1-201ENST00000358519 CICQ96RK0 1608 aaPredicted RBP4.96□□□□□ -1.62
CNGA1-201ENST00000358519 DYNC1I1O14576 645 aa4.96□□□□□ -1.62
CNGA1-201ENST00000358519 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 WNT7AO00755 349 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 APBA3O96018 575 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 CCDC173Q0VFZ6 552 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 PRAM1Q96QH2 718 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 PPP1R9BQ96SB3 815 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 CDK19Q9BWU1 502 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 GTPBP4Q9BZE4 634 aaKnown RBP4.95□□□□□ -1.62
CNGA1-201ENST00000358519 ABCA3Q99758 1704 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 NFAT5O94916 1531 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 ROBO2Q9HCK4 1378 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 ZNF521Q96K83 1311 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 FCHSD2O94868 740 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
CNGA1-201ENST00000358519 ESCO1Q5FWF5 840 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 RUNDC1Q96C34 613 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 CAMKK2Q96RR4 588 aa4.95□□□□□ -1.62
CNGA1-201ENST00000358519 PKD1L3Q7Z443 1732 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms