RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 SLC39A6Q13433 755 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
SPTAN1-201ENST00000358161 KCNA6P17658 529 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 ATP2B3Q16720 1220 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 IQCEQ6IPM2 695 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 TRAF1Q13077 416 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 NEO1Q92859 1461 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 HSPA2P54652 639 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 KRT23Q9C075 422 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 TTC22Q5TAA0 569 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 NBPF14Q5TI25 921 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 PYM1Q9BRP8 204 aaKnown RBP12□□□□□ -0.49
SPTAN1-201ENST00000358161 OGFOD1Q8N543 542 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 ZFYVE16Q7Z3T8 1539 aa12□□□□□ -0.49
SPTAN1-201ENST00000358161 SNRKQ9NRH2 765 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 POLD1P28340 1107 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 NFATC2IPQ8NCF5 419 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 ANXA1P04083 346 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 PARP3Q9Y6F1 533 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 CTAGE5O15320 804 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 PARD3Q8TEW0 1356 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 MCM4P33991 863 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 NEK1Q96PY6 1258 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 CNNM2Q9H8M5 875 aa11.99□□□□□ -0.49
SPTAN1-201ENST00000358161 FKBP15Q5T1M5 1219 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 ANO10Q9NW15 660 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 HOXC9P31274 260 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 MCM5P33992 734 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 TMTC2Q8N394 836 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 EDC4Q6P2E9 1401 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 CCDC150Q8NCX0 1101 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 PIK3C2GO75747 1445 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 ADGRL2O95490 1459 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 MTERF4Q7Z6M4 381 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 AMPD3Q01432 767 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-201ENST00000358161 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 TCP11L1Q9NUJ3 509 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 CYP7A1P22680 504 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 CCT2P78371 535 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 NUCB1Q02818 461 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 CCDC183Q5T5S1 534 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 LINS1Q8NG48 757 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 SAMD9Q5K651 1589 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 GOLGA6L10A6NI86 522 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 TSPY3P0CV98 308 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 TSPY8P0CW00 308 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 CFAP100Q494V2 611 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 KIAA1328Q86T90 577 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 JARID2Q92833 1246 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 GRPEL1Q9HAV7 217 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 BTG4Q9NY30 223 aa11.97□□□□□ -0.49
SPTAN1-201ENST00000358161 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 ANKRD2Q9GZV1 360 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 ATP8B2P98198 1209 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 JAKMIP3Q5VZ66 844 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 ESR2Q92731 530 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 MEIS3Q99687 375 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 PATL2C9JE40 543 aaKnown RBP11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 CETN2P41208 172 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
SPTAN1-201ENST00000358161 PLXNC1O60486 1568 aa11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 PLCG2P16885 1265 aa11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 WTAPQ15007 396 aa11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 COL17A1Q9UMD9 1497 aaPredicted RBP11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 SBNO1A3KN83 1393 aa11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 VPS36Q86VN1 386 aa11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 ANKRD44Q8N8A2 993 aa11.96□□□□□ -0.5
SPTAN1-201ENST00000358161 GNAT2P19087 354 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 GUCY1B3Q02153 619 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 NEBLO76041 1014 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 C8orf58Q8NAV2 365 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 EYA1Q99502 592 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 LRRC27Q9C0I9 530 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 MICU3Q86XE3 530 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 CNNM3Q8NE01 707 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 EYA3Q99504 573 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 SLC4A4Q9Y6R1 1079 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 CHMP4BP1P59074 171 aa11.95□□□□□ -0.5
SPTAN1-201ENST00000358161 HAND2P61296 217 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms