RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CCT4P50991 539 aaKnown RBP18.82■□□□□ 0.6
CCNE1-202ENST00000357943 CWC25Q9NXE8 425 aaPredicted RBP18.82■□□□□ 0.6
CCNE1-202ENST00000357943 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
CCNE1-202ENST00000357943 SERPINB2P05120 415 aa18.81■□□□□ 0.6
CCNE1-202ENST00000357943 GCKRQ14397 625 aa18.81■□□□□ 0.6
CCNE1-202ENST00000357943 PDE3AQ14432 1141 aa18.81■□□□□ 0.6
CCNE1-202ENST00000357943 ALDH1L1O75891 902 aa18.8■□□□□ 0.6
CCNE1-202ENST00000357943 NTSR2O95665 410 aa18.8■□□□□ 0.6
CCNE1-202ENST00000357943 MS4A1P11836 297 aa18.8■□□□□ 0.6
CCNE1-202ENST00000357943 RTL5Q5HYW3 569 aaPredicted RBP18.8■□□□□ 0.6
CCNE1-202ENST00000357943 PARP3Q9Y6F1 533 aa18.8■□□□□ 0.6
CCNE1-202ENST00000357943 PPP1R42Q7Z4L9 355 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
CCNE1-202ENST00000357943 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 SYNE4Q8N205 404 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
CCNE1-202ENST00000357943 FAM89AQ96GI7 184 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 UTP14AQ9BVJ6 771 aaKnown RBP18.79■□□□□ 0.6
CCNE1-202ENST00000357943 TRMT112Q9UI30 125 aaKnown RBP18.79■□□□□ 0.6
CCNE1-202ENST00000357943 COG6Q9Y2V7 657 aa18.79■□□□□ 0.6
CCNE1-202ENST00000357943 PTGER2P43116 358 aa18.78■□□□□ 0.6
CCNE1-202ENST00000357943 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
CCNE1-202ENST00000357943 COL24A1Q17RW2 1714 aa18.78■□□□□ 0.6
CCNE1-202ENST00000357943 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
CCNE1-202ENST00000357943 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
CCNE1-202ENST00000357943 PRR5LQ6MZQ0 368 aa18.77■□□□□ 0.6
CCNE1-202ENST00000357943 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
CCNE1-202ENST00000357943 NYXQ9GZU5 481 aa18.77■□□□□ 0.6
CCNE1-202ENST00000357943 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
CCNE1-202ENST00000357943 SPON1Q9HCB6 807 aa18.77■□□□□ 0.6
CCNE1-202ENST00000357943 C9orf78Q9NZ63 289 aaPredicted RBP18.77■□□□□ 0.6
CCNE1-202ENST00000357943 AFDNP55196 1824 aaKnown RBP18.76■□□□□ 0.59
CCNE1-202ENST00000357943 GRM8O00222 908 aa18.76■□□□□ 0.59
CCNE1-202ENST00000357943 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
CCNE1-202ENST00000357943 POLD1P28340 1107 aa18.76■□□□□ 0.59
CCNE1-202ENST00000357943 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
CCNE1-202ENST00000357943 MVPQ14764 893 aaKnown RBP18.76■□□□□ 0.59
CCNE1-202ENST00000357943 ERFEQ4G0M1 354 aa18.76■□□□□ 0.59
CCNE1-202ENST00000357943 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
CCNE1-202ENST00000357943 SH3TC1Q8TE82 1336 aa18.75■□□□□ 0.59
CCNE1-202ENST00000357943 H7C1W4 665 aa18.75■□□□□ 0.59
CCNE1-202ENST00000357943 NPHP1O15259 732 aa18.75■□□□□ 0.59
CCNE1-202ENST00000357943 PCCAP05165 728 aaPredicted RBP18.75■□□□□ 0.59
CCNE1-202ENST00000357943 CASP7P55210 303 aa18.75■□□□□ 0.59
CCNE1-202ENST00000357943 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
CCNE1-202ENST00000357943 MEIS3Q99687 375 aa18.75■□□□□ 0.59
CCNE1-202ENST00000357943 N4BP2Q86UW6 1770 aaPredicted RBP18.75■□□□□ 0.59
CCNE1-202ENST00000357943 ABCC12Q96J65 1359 aa18.74■□□□□ 0.59
CCNE1-202ENST00000357943 ZBTB7BO15156 539 aaPredicted RBP18.74■□□□□ 0.59
CCNE1-202ENST00000357943 IRX6P78412 446 aaPredicted RBP18.74■□□□□ 0.59
CCNE1-202ENST00000357943 UTYO14607 1347 aa18.73■□□□□ 0.59
CCNE1-202ENST00000357943 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
CCNE1-202ENST00000357943 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
CCNE1-202ENST00000357943 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
CCNE1-202ENST00000357943 ST5P78524 1137 aa18.72■□□□□ 0.59
CCNE1-202ENST00000357943 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
CCNE1-202ENST00000357943 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
CCNE1-202ENST00000357943 CDHR2Q9BYE9 1310 aa18.71■□□□□ 0.59
CCNE1-202ENST00000357943 UBTFL1P0CB47 393 aaPredicted RBP18.71■□□□□ 0.58
CCNE1-202ENST00000357943 SLC10A5Q5PT55 438 aa18.71■□□□□ 0.58
CCNE1-202ENST00000357943 KAZALD1Q96I82 304 aa18.71■□□□□ 0.58
CCNE1-202ENST00000357943 SUCLG2Q96I99 432 aa18.71■□□□□ 0.58
CCNE1-202ENST00000357943 UTRNP46939 3433 aa18.71■□□□□ 0.58
CCNE1-202ENST00000357943 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
CCNE1-202ENST00000357943 GNAI3P08754 354 aa18.69■□□□□ 0.58
CCNE1-202ENST00000357943 EPHA10Q5JZY3 1008 aa18.68■□□□□ 0.58
CCNE1-202ENST00000357943 BRIP1Q9BX63 1249 aa18.68■□□□□ 0.58
CCNE1-202ENST00000357943 C10orf71Q711Q0 1435 aa18.68■□□□□ 0.58
CCNE1-202ENST00000357943 PDE8AO60658 829 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 PLA2G12BQ9BX93 195 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 C1orf115Q9H7X2 142 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 LRRFIP2Q9Y608 721 aaKnown RBP18.67■□□□□ 0.58
CCNE1-202ENST00000357943 FOXO4P98177 505 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
CCNE1-202ENST00000357943 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
CCNE1-202ENST00000357943 PPP1R1BQ9UD71 204 aaPredicted RBP18.67■□□□□ 0.58
CCNE1-202ENST00000357943 DDX60Q8IY21 1712 aaKnown RBP18.66■□□□□ 0.58
CCNE1-202ENST00000357943 RIC1Q4ADV7 1423 aa18.66■□□□□ 0.58
CCNE1-202ENST00000357943 GNAI2P04899 355 aa18.66■□□□□ 0.58
CCNE1-202ENST00000357943 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
CCNE1-202ENST00000357943 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
CCNE1-202ENST00000357943 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
CCNE1-202ENST00000357943 KLRG2A4D1S0 409 aaPredicted RBP18.65■□□□□ 0.58
CCNE1-202ENST00000357943 HSP90B1P14625 803 aaKnown RBP18.65■□□□□ 0.58
CCNE1-202ENST00000357943 CTSWP56202 376 aa18.65■□□□□ 0.58
CCNE1-202ENST00000357943 PDE6BP35913 854 aa18.64■□□□□ 0.57
CCNE1-202ENST00000357943 TTLL11Q8NHH1 800 aa18.64■□□□□ 0.57
CCNE1-202ENST00000357943 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.57
CCNE1-202ENST00000357943 CSF1RP07333 972 aa18.63■□□□□ 0.57
CCNE1-202ENST00000357943 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
CCNE1-202ENST00000357943 CRY2Q49AN0 593 aa18.63■□□□□ 0.57
CCNE1-202ENST00000357943 LMBR1LQ6UX01 489 aa18.63■□□□□ 0.57
CCNE1-202ENST00000357943 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
CCNE1-202ENST00000357943 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
CCNE1-202ENST00000357943 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
CCNE1-202ENST00000357943 RABL6Q3YEC7 729 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms