RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 ERC1Q8IUD2 1116 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 ALDH8A1Q9H2A2 487 aaPredicted RBP28.11■■■□□ 2.09
NPAS3-203ENST00000357798 DACT1Q9NYF0 836 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 DTNBO60941 627 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 ANKRD1Q15327 319 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 MAP4K1Q92918 833 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 SPDYE4A6NLX3 237 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 SNRKQ9NRH2 765 aa28.11■■■□□ 2.09
NPAS3-203ENST00000357798 TNRQ92752 1358 aa28.1■■■□□ 2.09
NPAS3-203ENST00000357798 HOXC9P31274 260 aa28.1■■■□□ 2.09
NPAS3-203ENST00000357798 ZSCAN25Q6NSZ9 544 aa28.1■■■□□ 2.09
NPAS3-203ENST00000357798 FERMT3Q86UX7 667 aa28.1■■■□□ 2.09
NPAS3-203ENST00000357798 CHMP3Q9Y3E7 222 aa28.1■■■□□ 2.09
NPAS3-203ENST00000357798 USP54Q70EL1 1684 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 CEMIPQ8WUJ3 1361 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 GOLGA6L4A6NEF3 574 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 DRC7Q8IY82 874 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 SPATA32Q96LK8 384 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 PLEKHG1Q9ULL1 1385 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 PI4KAP2A4QPH2 592 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 IFIT2P09913 472 aaKnown RBP28.09■■■□□ 2.09
NPAS3-203ENST00000357798 CKAP2LQ8IYA6 745 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 PI4KAP1Q8N8J0 262 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 PAXBP1Q9Y5B6 917 aa28.09■■■□□ 2.09
NPAS3-203ENST00000357798 TRIM5Q9C035 493 aa28.08■■■□□ 2.09
NPAS3-203ENST00000357798 OGFRQ9NZT2 677 aa28.08■■■□□ 2.09
NPAS3-203ENST00000357798 MARF1Q9Y4F3 1742 aaKnown RBP28.08■■■□□ 2.09
NPAS3-203ENST00000357798 SLC27A2O14975 620 aa28.08■■■□□ 2.09
NPAS3-203ENST00000357798 KCNJ4P48050 445 aa28.08■■■□□ 2.09
NPAS3-203ENST00000357798 EIF4A1P60842 406 aaKnown RBP28.08■■■□□ 2.09
NPAS3-203ENST00000357798 LRMPQ12912 555 aa28.08■■■□□ 2.09
NPAS3-203ENST00000357798 LEO1Q8WVC0 666 aaPredicted RBP28.07■■■□□ 2.08
NPAS3-203ENST00000357798 CHPF2Q9P2E5 772 aa28.07■■■□□ 2.08
NPAS3-203ENST00000357798 CAVIN2O95810 425 aa28.07■■■□□ 2.08
NPAS3-203ENST00000357798 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
NPAS3-203ENST00000357798 CDC25BP30305 580 aa28.07■■■□□ 2.08
NPAS3-203ENST00000357798 ADCY9O60503 1353 aa28.07■■■□□ 2.08
NPAS3-203ENST00000357798 RGPD8O14715 1765 aaPredicted RBP28.07■■■□□ 2.08
NPAS3-203ENST00000357798 FAM173BQ6P4H8 233 aa28.06■■■□□ 2.08
NPAS3-203ENST00000357798 NGDNQ8NEJ9 315 aaKnown RBP28.06■■■□□ 2.08
NPAS3-203ENST00000357798 DDX54Q8TDD1 881 aaKnown RBP28.06■■■□□ 2.08
NPAS3-203ENST00000357798 TNNT1P13805 278 aa28.06■■■□□ 2.08
NPAS3-203ENST00000357798 C16orf45Q96MC5 204 aaPredicted RBP28.06■■■□□ 2.08
NPAS3-203ENST00000357798 BLOC1S2Q6QNY1 142 aa28.05■■■□□ 2.08
NPAS3-203ENST00000357798 RNF20Q5VTR2 975 aa28.05■■■□□ 2.08
NPAS3-203ENST00000357798 NRBP1Q9UHY1 535 aa28.05■■■□□ 2.08
NPAS3-203ENST00000357798 NMIQ13287 307 aaPredicted RBP28.05■■■□□ 2.08
NPAS3-203ENST00000357798 CGNQ9P2M7 1197 aaKnown RBP28.05■■■□□ 2.08
NPAS3-203ENST00000357798 DIP2AQ14689 1571 aa28.04■■■□□ 2.08
NPAS3-203ENST00000357798 NPHP4O75161 1426 aaPredicted RBP28.04■■■□□ 2.08
NPAS3-203ENST00000357798 RPS6KB1P23443 525 aa28.04■■■□□ 2.08
NPAS3-203ENST00000357798 ESF1Q9H501 851 aaKnown RBP28.04■■■□□ 2.08
NPAS3-203ENST00000357798 HDAC5Q9UQL6 1122 aa28.04■■■□□ 2.08
NPAS3-203ENST00000357798 GIGYF1O75420 1035 aaPredicted RBP28.03■■■□□ 2.08
NPAS3-203ENST00000357798 ALDH1L1O75891 902 aa28.03■■■□□ 2.08
NPAS3-203ENST00000357798 ZNF165P49910 485 aa28.03■■■□□ 2.08
NPAS3-203ENST00000357798 TSPOAP1O95153 1857 aa28.03■■■□□ 2.08
NPAS3-203ENST00000357798 FAM227BQ96M60 508 aa28.03■■■□□ 2.08
NPAS3-203ENST00000357798 CTNNA3Q9UI47 895 aa28.03■■■□□ 2.08
NPAS3-203ENST00000357798 LARP1Q6PKG0 1096 aaKnown RBP28.02■■■□□ 2.08
NPAS3-203ENST00000357798 AACSQ86V21 672 aa28.02■■■□□ 2.08
NPAS3-203ENST00000357798 CCDC112Q8NEF3 446 aa28.02■■■□□ 2.08
NPAS3-203ENST00000357798 CLIP2Q9UDT6 1046 aa28.02■■■□□ 2.08
NPAS3-203ENST00000357798 NLRP6P59044 892 aa28.01■■■□□ 2.07
NPAS3-203ENST00000357798 TFIP11Q9UBB9 837 aaKnown RBP28.01■■■□□ 2.07
NPAS3-203ENST00000357798 JCADQ9P266 1359 aa28.01■■■□□ 2.07
NPAS3-203ENST00000357798 TOB2Q14106 344 aaPredicted RBP28■■■□□ 2.07
NPAS3-203ENST00000357798 CACTINQ8WUQ7 758 aaKnown RBP28■■■□□ 2.07
NPAS3-203ENST00000357798 MED23Q9ULK4 1368 aa28■■■□□ 2.07
NPAS3-203ENST00000357798 NR1I2O75469 434 aa28■■■□□ 2.07
NPAS3-203ENST00000357798 HMG20BQ9P0W2 317 aa28■■■□□ 2.07
NPAS3-203ENST00000357798 SARM1Q6SZW1 724 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 PGBD1Q96JS3 809 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 DNAJC25Q9H1X3 360 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 TSGA10IPQ3SY00 556 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 BICD2Q8TD16 824 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 NEMFO60524 1076 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
NPAS3-203ENST00000357798 TPD52L1Q16890 204 aaPredicted RBP27.99■■■□□ 2.07
NPAS3-203ENST00000357798 PA2G4Q9UQ80 394 aaKnown RBP27.99■■■□□ 2.07
NPAS3-203ENST00000357798 GABPB1Q06547 395 aaPredicted RBP27.98■■■□□ 2.07
NPAS3-203ENST00000357798 C9orf78Q9NZ63 289 aaPredicted RBP27.98■■■□□ 2.07
NPAS3-203ENST00000357798 COL9A3Q14050 684 aaPredicted RBP27.97■■■□□ 2.07
NPAS3-203ENST00000357798 DDX41Q9UJV9 622 aaKnown RBP27.97■■■□□ 2.07
NPAS3-203ENST00000357798 A0A0D9SFI3 127 aa27.96■■■□□ 2.07
NPAS3-203ENST00000357798 RESTQ13127 1097 aa27.96■■■□□ 2.07
NPAS3-203ENST00000357798 CCDC144BQ3MJ40 725 aa27.96■■■□□ 2.07
NPAS3-203ENST00000357798 CCDC144CPQ8IYA2 1237 aa27.96■■■□□ 2.07
NPAS3-203ENST00000357798 SLIT1O75093 1534 aa27.96■■■□□ 2.07
NPAS3-203ENST00000357798 MRFAP1L1Q96HT8 127 aa27.96■■■□□ 2.07
NPAS3-203ENST00000357798 LMO7Q8WWI1 1683 aa27.95■■■□□ 2.07
NPAS3-203ENST00000357798 CEP135Q66GS9 1140 aa27.95■■■□□ 2.07
NPAS3-203ENST00000357798 LTV1Q96GA3 475 aaPredicted RBP27.95■■■□□ 2.07
NPAS3-203ENST00000357798 RBM6P78332 1123 aaKnown RBP27.95■■■□□ 2.06
NPAS3-203ENST00000357798 TCEANC2Q96MN5 208 aa27.95■■■□□ 2.06
NPAS3-203ENST00000357798 LTKP29376 864 aa27.94■■■□□ 2.06
NPAS3-203ENST00000357798 IQCB1Q15051 598 aa27.94■■■□□ 2.06
NPAS3-203ENST00000357798 DBF4Q9UBU7 674 aaPredicted RBP27.94■■■□□ 2.06
NPAS3-203ENST00000357798 MYH15Q9Y2K3 1946 aa27.94■■■□□ 2.06
NPAS3-203ENST00000357798 EAF2Q96CJ1 260 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms