RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 FAM227BQ96M60 508 aa19.1■□□□□ 0.65
PHTF1-201ENST00000357783 CASTP20810 708 aaKnown RBP19.1■□□□□ 0.65
PHTF1-201ENST00000357783 PCDH11XQ9BZA7 1347 aa19.09■□□□□ 0.65
PHTF1-201ENST00000357783 PCDH11YQ9BZA8 1340 aa19.09■□□□□ 0.65
PHTF1-201ENST00000357783 A0A087WZG4 1122 aa19.09■□□□□ 0.65
PHTF1-201ENST00000357783 NMIQ13287 307 aaPredicted RBP19.09■□□□□ 0.65
PHTF1-201ENST00000357783 GPT2Q8TD30 523 aa19.09■□□□□ 0.65
PHTF1-201ENST00000357783 RUFY3Q7L099 469 aa19.09■□□□□ 0.65
PHTF1-201ENST00000357783 FSD1Q9BTV5 496 aa19.09■□□□□ 0.65
PHTF1-201ENST00000357783 CCDC171Q6TFL3 1326 aa19.08■□□□□ 0.65
PHTF1-201ENST00000357783 PLBD2Q8NHP8 589 aa19.08■□□□□ 0.65
PHTF1-201ENST00000357783 NBPF26B4DH59 902 aa19.08■□□□□ 0.64
PHTF1-201ENST00000357783 RFX5P48382 616 aaPredicted RBP19.08■□□□□ 0.64
PHTF1-201ENST00000357783 ZSCAN23Q3MJ62 389 aa19.08■□□□□ 0.64
PHTF1-201ENST00000357783 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
PHTF1-201ENST00000357783 NBPF14Q5TI25 921 aa19.08■□□□□ 0.64
PHTF1-201ENST00000357783 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.64
PHTF1-201ENST00000357783 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
PHTF1-201ENST00000357783 NBPF15Q8N660 670 aa19.08■□□□□ 0.64
PHTF1-201ENST00000357783 JAKMIP1Q96N16 626 aaKnown RBP19.08■□□□□ 0.64
PHTF1-201ENST00000357783 COPRSQ9NQ92 184 aa19.08■□□□□ 0.64
PHTF1-201ENST00000357783 RBM27Q9P2N5 1060 aaKnown RBP19.08■□□□□ 0.64
PHTF1-201ENST00000357783 PTPN12Q05209 780 aaKnown RBP19.07■□□□□ 0.64
PHTF1-201ENST00000357783 ADCK5Q3MIX3 580 aa19.07■□□□□ 0.64
PHTF1-201ENST00000357783 LIMCH1Q9UPQ0 1083 aa19.07■□□□□ 0.64
PHTF1-201ENST00000357783 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
PHTF1-201ENST00000357783 HIP1O00291 1037 aa19.06■□□□□ 0.64
PHTF1-201ENST00000357783 KCNJ4P48050 445 aa19.06■□□□□ 0.64
PHTF1-201ENST00000357783 TFCP2Q12800 502 aa19.06■□□□□ 0.64
PHTF1-201ENST00000357783 DDX54Q8TDD1 881 aaKnown RBP19.06■□□□□ 0.64
PHTF1-201ENST00000357783 A0A0D9SFI3 127 aa19.06■□□□□ 0.64
PHTF1-201ENST00000357783 RRAGDQ9NQL2 400 aaPredicted RBP19.06■□□□□ 0.64
PHTF1-201ENST00000357783 SLAIN2Q9P270 581 aa19.06■□□□□ 0.64
PHTF1-201ENST00000357783 RBM8AQ9Y5S9 174 aaKnown RBP19.06■□□□□ 0.64
PHTF1-201ENST00000357783 RABL6Q3YEC7 729 aaPredicted RBP19.05■□□□□ 0.64
PHTF1-201ENST00000357783 EDC3Q96F86 508 aaKnown RBP19.05■□□□□ 0.64
PHTF1-201ENST00000357783 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
PHTF1-201ENST00000357783 SOS2Q07890 1332 aaPredicted RBP19.05■□□□□ 0.64
PHTF1-201ENST00000357783 ZNF445P59923 1031 aa19.05■□□□□ 0.64
PHTF1-201ENST00000357783 TTLL7Q6ZT98 887 aa19.05■□□□□ 0.64
PHTF1-201ENST00000357783 DBNLQ9UJU6 430 aaKnown RBP19.05■□□□□ 0.64
PHTF1-201ENST00000357783 NECTIN1Q15223 517 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 TNNI3KQ59H18 835 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
PHTF1-201ENST00000357783 FPGT-TNNI3KV9GXZ4 949 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 WDR33Q9C0J8 1336 aaKnown RBP19.04■□□□□ 0.64
PHTF1-201ENST00000357783 LARGE1O95461 756 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 A1BGP04217 495 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 CASP7P55210 303 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 CHMP3Q9Y3E7 222 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 RPAP1Q9BWH6 1393 aaPredicted RBP19.04■□□□□ 0.64
PHTF1-201ENST00000357783 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
PHTF1-201ENST00000357783 ZNF335Q9H4Z2 1342 aaPredicted RBP19.04■□□□□ 0.64
PHTF1-201ENST00000357783 IL2RBP14784 551 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 CREB3L3Q68CJ9 461 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 KCNB2Q92953 911 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 CYP46A1Q9Y6A2 500 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 ZKSCAN1P17029 563 aaPredicted RBP19.03■□□□□ 0.64
PHTF1-201ENST00000357783 LMBR1LQ6UX01 489 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 ERBB4Q15303 1308 aa19.03■□□□□ 0.64
PHTF1-201ENST00000357783 COL15A1P39059 1388 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 NASPP49321 788 aaPredicted RBP19.02■□□□□ 0.64
PHTF1-201ENST00000357783 ZSWIM6Q9HCJ5 1215 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 NDUFB9Q9Y6M9 179 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 TCHHQ07283 1943 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 MAP4K1Q92918 833 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 KCPQ6ZWJ8 1503 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 STRCQ7RTU9 1775 aa19.02■□□□□ 0.64
PHTF1-201ENST00000357783 ABCA3Q99758 1704 aa19.02■□□□□ 0.63
PHTF1-201ENST00000357783 VPS53Q5VIR6 699 aa19.02■□□□□ 0.63
PHTF1-201ENST00000357783 CARD10Q9BWT7 1032 aa19.02■□□□□ 0.63
PHTF1-201ENST00000357783 TM6SF1Q9BZW5 370 aa19.02■□□□□ 0.63
PHTF1-201ENST00000357783 TMEM63CQ9P1W3 806 aa19.02■□□□□ 0.63
PHTF1-201ENST00000357783 CCDC83Q8IWF9 413 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 ZBTB3Q9H5J0 574 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 GDPD2Q9HCC8 539 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.01■□□□□ 0.63
PHTF1-201ENST00000357783 MED23Q9ULK4 1368 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 NUP188Q5SRE5 1749 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 SLC27A2O14975 620 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 DTNBO60941 627 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 ZNF589Q86UQ0 364 aaPredicted RBP19.01■□□□□ 0.63
PHTF1-201ENST00000357783 DBNDD2Q9BQY9 259 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
PHTF1-201ENST00000357783 ATP5JP18859 108 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 EVA1CP58658 441 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 SNRKQ9NRH2 765 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 CWC25Q9NXE8 425 aaPredicted RBP19■□□□□ 0.63
PHTF1-201ENST00000357783 CCDC9Q9Y3X0 531 aaKnown RBP19■□□□□ 0.63
PHTF1-201ENST00000357783 H7C1W4 665 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 MBD3O95983 291 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 FOXO4P98177 505 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
PHTF1-201ENST00000357783 UBE2Q2Q8WVN8 375 aa19■□□□□ 0.63
PHTF1-201ENST00000357783 DNAJC2Q99543 621 aaKnown RBP19■□□□□ 0.63
PHTF1-201ENST00000357783 PAPPAQ13219 1627 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms