RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 RBSNQ9H1K0 784 aa17.71■□□□□ 0.43
USP6-202ENST00000357482 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
USP6-202ENST00000357482 FKBP5Q13451 457 aaPredicted RBP17.7■□□□□ 0.42
USP6-202ENST00000357482 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
USP6-202ENST00000357482 CFAP53Q96M91 514 aa17.7■□□□□ 0.42
USP6-202ENST00000357482 FEZ2Q9UHY8 353 aaPredicted RBP17.7■□□□□ 0.42
USP6-202ENST00000357482 GNPATO15228 680 aa17.7■□□□□ 0.42
USP6-202ENST00000357482 IGHDP01880 384 aa17.7■□□□□ 0.42
USP6-202ENST00000357482 ITPK1Q13572 414 aa17.7■□□□□ 0.42
USP6-202ENST00000357482 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
USP6-202ENST00000357482 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
USP6-202ENST00000357482 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
USP6-202ENST00000357482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
USP6-202ENST00000357482 ZSCAN23Q3MJ62 389 aa17.69■□□□□ 0.42
USP6-202ENST00000357482 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
USP6-202ENST00000357482 NFATC2IPQ8NCF5 419 aa17.69■□□□□ 0.42
USP6-202ENST00000357482 MCCP23508 829 aa17.68■□□□□ 0.42
USP6-202ENST00000357482 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
USP6-202ENST00000357482 DUSP27Q5VZP5 1158 aa17.68■□□□□ 0.42
USP6-202ENST00000357482 RAD50Q92878 1312 aa17.68■□□□□ 0.42
USP6-202ENST00000357482 PTCD1O75127 700 aaKnown RBP17.68■□□□□ 0.42
USP6-202ENST00000357482 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
USP6-202ENST00000357482 NCAPGQ9BPX3 1015 aa17.67■□□□□ 0.42
USP6-202ENST00000357482 YY1P25490 414 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 SSFA2P28290 1259 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 CLUAP1Q96AJ1 413 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 IGSF3O75054 1194 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
USP6-202ENST00000357482 CTNNA3Q9UI47 895 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP6-202ENST00000357482 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 UBR3Q6ZT12 1888 aa17.66■□□□□ 0.42
USP6-202ENST00000357482 GTF2A1P52655 376 aaPredicted RBP17.65■□□□□ 0.42
USP6-202ENST00000357482 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
USP6-202ENST00000357482 KRT222Q8N1A0 295 aa17.65■□□□□ 0.42
USP6-202ENST00000357482 NGEFQ8N5V2 710 aa17.65■□□□□ 0.42
USP6-202ENST00000357482 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
USP6-202ENST00000357482 COL24A1Q17RW2 1714 aa17.65■□□□□ 0.42
USP6-202ENST00000357482 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
USP6-202ENST00000357482 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.42
USP6-202ENST00000357482 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.42
USP6-202ENST00000357482 FBXO3Q9UK99 471 aa17.64■□□□□ 0.42
USP6-202ENST00000357482 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.41
USP6-202ENST00000357482 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
USP6-202ENST00000357482 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.41
USP6-202ENST00000357482 GPR162Q16538 588 aa17.64■□□□□ 0.41
USP6-202ENST00000357482 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
USP6-202ENST00000357482 RTCBQ9Y3I0 505 aaKnown RBP17.64■□□□□ 0.41
USP6-202ENST00000357482 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
USP6-202ENST00000357482 TPM3P06753 285 aa17.63■□□□□ 0.41
USP6-202ENST00000357482 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
USP6-202ENST00000357482 NOP2P46087 812 aaKnown RBP17.62■□□□□ 0.41
USP6-202ENST00000357482 UVSSAQ2YD98 709 aa17.62■□□□□ 0.41
USP6-202ENST00000357482 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
USP6-202ENST00000357482 BANK1Q8NDB2 785 aa17.62■□□□□ 0.41
USP6-202ENST00000357482 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
USP6-202ENST00000357482 NUCB2P80303 420 aa17.61■□□□□ 0.41
USP6-202ENST00000357482 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
USP6-202ENST00000357482 RASSF4Q9H2L5 321 aa17.61■□□□□ 0.41
USP6-202ENST00000357482 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
USP6-202ENST00000357482 GOLGA6L6A8MZA4 724 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 APAF1O14727 1248 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 U2AF1L5P0DN76 240 aaPredicted RBP17.6■□□□□ 0.41
USP6-202ENST00000357482 U2AF1Q01081 240 aaKnown RBP eCLIP17.6■□□□□ 0.41
USP6-202ENST00000357482 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 CEP83Q9Y592 693 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
USP6-202ENST00000357482 ICE2Q659A1 982 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 TSC1Q92574 1164 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 CNTNAP4Q9C0A0 1308 aa17.6■□□□□ 0.41
USP6-202ENST00000357482 LOC102724159A0A0B4J2E5 919 aa17.59■□□□□ 0.41
USP6-202ENST00000357482 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
USP6-202ENST00000357482 PWP2Q15269 919 aaKnown RBP17.59■□□□□ 0.41
USP6-202ENST00000357482 NBPF20Q3BBV1 942 aa17.59■□□□□ 0.41
USP6-202ENST00000357482 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
USP6-202ENST00000357482 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
USP6-202ENST00000357482 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
USP6-202ENST00000357482 REC8O95072 547 aa17.59■□□□□ 0.41
USP6-202ENST00000357482 RFC4P35249 363 aa17.59■□□□□ 0.41
USP6-202ENST00000357482 CAVIN1Q6NZI2 390 aaKnown RBP17.59■□□□□ 0.41
USP6-202ENST00000357482 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
USP6-202ENST00000357482 CRKLP46109 303 aaKnown RBP17.58■□□□□ 0.4
USP6-202ENST00000357482 TEFQ10587 303 aa17.58■□□□□ 0.4
USP6-202ENST00000357482 FAM184AQ8NB25 1140 aa17.58■□□□□ 0.4
USP6-202ENST00000357482 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
USP6-202ENST00000357482 FAM53CQ9NYF3 392 aa17.58■□□□□ 0.4
USP6-202ENST00000357482 MRC1P22897 1456 aa17.58■□□□□ 0.4
USP6-202ENST00000357482 CCDC172P0C7W6 258 aa17.57■□□□□ 0.4
USP6-202ENST00000357482 ADRA2BP18089 450 aa17.57■□□□□ 0.4
USP6-202ENST00000357482 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
USP6-202ENST00000357482 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
USP6-202ENST00000357482 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
USP6-202ENST00000357482 GUCY2CP25092 1073 aa17.57■□□□□ 0.4
USP6-202ENST00000357482 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
USP6-202ENST00000357482 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
USP6-202ENST00000357482 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms