RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TM4SF1P30408 202 aa32.09■■■□□ 2.73
SSBP3-202ENST00000357475 DDR1Q08345 913 aa32.08■■■□□ 2.73
SSBP3-202ENST00000357475 CCDC191Q8NCU4 936 aa32.08■■■□□ 2.73
SSBP3-202ENST00000357475 CWC25Q9NXE8 425 aaPredicted RBP32.08■■■□□ 2.73
SSBP3-202ENST00000357475 SETDB2Q96T68 719 aa32.07■■■□□ 2.72
SSBP3-202ENST00000357475 MEIS3Q99687 375 aa32.07■■■□□ 2.72
SSBP3-202ENST00000357475 USP44Q9H0E7 712 aa32.07■■■□□ 2.72
SSBP3-202ENST00000357475 ZBTB7AO95365 584 aa32.06■■■□□ 2.72
SSBP3-202ENST00000357475 RTL5Q5HYW3 569 aaPredicted RBP32.06■■■□□ 2.72
SSBP3-202ENST00000357475 SYNE4Q8N205 404 aa32.06■■■□□ 2.72
SSBP3-202ENST00000357475 NLGN1Q8N2Q7 840 aa32.06■■■□□ 2.72
SSBP3-202ENST00000357475 NBPF7P0C2Y1 421 aaPredicted RBP32.05■■■□□ 2.72
SSBP3-202ENST00000357475 EXOC6Q8TAG9 804 aa32.05■■■□□ 2.72
SSBP3-202ENST00000357475 ZBTB7BO15156 539 aaPredicted RBP32.04■■■□□ 2.72
SSBP3-202ENST00000357475 NTSR2O95665 410 aa32.04■■■□□ 2.72
SSBP3-202ENST00000357475 POLRMTO00411 1230 aaKnown RBP32.03■■■□□ 2.72
SSBP3-202ENST00000357475 MMP10P09238 476 aa32.03■■■□□ 2.72
SSBP3-202ENST00000357475 PARP10Q53GL7 1025 aa32.03■■■□□ 2.72
SSBP3-202ENST00000357475 CARMIL3Q8ND23 1372 aa32.03■■■□□ 2.72
SSBP3-202ENST00000357475 GRM8O00222 908 aa32.02■■■□□ 2.72
SSBP3-202ENST00000357475 SLC16A10Q8TF71 515 aa32.02■■■□□ 2.72
SSBP3-202ENST00000357475 FAM89AQ96GI7 184 aa32.02■■■□□ 2.72
SSBP3-202ENST00000357475 CASP7P55210 303 aa32.01■■■□□ 2.72
SSBP3-202ENST00000357475 UBE3BQ7Z3V4 1068 aa32.01■■■□□ 2.72
SSBP3-202ENST00000357475 NUTM1Q86Y26 1132 aa32.01■■■□□ 2.72
SSBP3-202ENST00000357475 C9orf78Q9NZ63 289 aaPredicted RBP32.01■■■□□ 2.72
SSBP3-202ENST00000357475 DDX19BQ9UMR2 479 aa32.01■■■□□ 2.72
SSBP3-202ENST00000357475 H7C1W4 665 aa32■■■□□ 2.71
SSBP3-202ENST00000357475 CCDC24Q8N4L8 307 aa32■■■□□ 2.71
SSBP3-202ENST00000357475 UTP14AQ9BVJ6 771 aaKnown RBP32■■■□□ 2.71
SSBP3-202ENST00000357475 TRMT112Q9UI30 125 aaKnown RBP32■■■□□ 2.71
SSBP3-202ENST00000357475 ATF5Q9Y2D1 282 aaPredicted RBP32■■■□□ 2.71
SSBP3-202ENST00000357475 NRXN2Q9P2S2 1712 aa32■■■□□ 2.71
SSBP3-202ENST00000357475 DDX60Q8IY21 1712 aaKnown RBP32■■■□□ 2.71
SSBP3-202ENST00000357475 IBTKQ9P2D0 1353 aaPredicted RBP32■■■□□ 2.71
SSBP3-202ENST00000357475 NBPF5PQ86XG9 351 aaPredicted RBP31.99■■■□□ 2.71
SSBP3-202ENST00000357475 ZBTB38Q8NAP3 1195 aaPredicted RBP31.99■■■□□ 2.71
SSBP3-202ENST00000357475 UTYO14607 1347 aa31.99■■■□□ 2.71
SSBP3-202ENST00000357475 SERPINB2P05120 415 aa31.98■■■□□ 2.71
SSBP3-202ENST00000357475 PPP1R42Q7Z4L9 355 aa31.98■■■□□ 2.71
SSBP3-202ENST00000357475 C1orf115Q9H7X2 142 aa31.98■■■□□ 2.71
SSBP3-202ENST00000357475 ABCC12Q96J65 1359 aa31.97■■■□□ 2.71
SSBP3-202ENST00000357475 PCCAP05165 728 aaPredicted RBP31.97■■■□□ 2.71
SSBP3-202ENST00000357475 ERFEQ4G0M1 354 aa31.97■■■□□ 2.71
SSBP3-202ENST00000357475 MTFR1LQ9H019 292 aa31.96■■■□□ 2.71
SSBP3-202ENST00000357475 LAMB2P55268 1798 aa31.96■■■□□ 2.71
SSBP3-202ENST00000357475 KAZALD1Q96I82 304 aa31.95■■■□□ 2.71
SSBP3-202ENST00000357475 SUCLG2Q96I99 432 aa31.95■■■□□ 2.71
SSBP3-202ENST00000357475 ZBTB40Q9NUA8 1239 aa31.95■■■□□ 2.71
SSBP3-202ENST00000357475 TNRC6CQ9HCJ0 1690 aaKnown RBP31.94■■■□□ 2.7
SSBP3-202ENST00000357475 SH3TC1Q8TE82 1336 aa31.94■■■□□ 2.7
SSBP3-202ENST00000357475 UBTFL1P0CB47 393 aaPredicted RBP31.94■■■□□ 2.7
SSBP3-202ENST00000357475 PRR5LQ6MZQ0 368 aa31.94■■■□□ 2.7
SSBP3-202ENST00000357475 PARP3Q9Y6F1 533 aa31.94■■■□□ 2.7
SSBP3-202ENST00000357475 EPHA10Q5JZY3 1008 aa31.93■■■□□ 2.7
SSBP3-202ENST00000357475 ANKRD31Q8N7Z5 1873 aa31.92■■■□□ 2.7
SSBP3-202ENST00000357475 HCLS1P14317 486 aaPredicted RBP31.92■■■□□ 2.7
SSBP3-202ENST00000357475 TPTE2Q6XPS3 522 aa31.92■■■□□ 2.7
SSBP3-202ENST00000357475 CNBD1Q8NA66 436 aa31.92■■■□□ 2.7
SSBP3-202ENST00000357475 NYXQ9GZU5 481 aa31.92■■■□□ 2.7
SSBP3-202ENST00000357475 LRRFIP2Q9Y608 721 aaKnown RBP31.92■■■□□ 2.7
SSBP3-202ENST00000357475 IRS4O14654 1257 aaPredicted RBP31.91■■■□□ 2.7
SSBP3-202ENST00000357475 NEFLP07196 543 aa31.91■■■□□ 2.7
SSBP3-202ENST00000357475 GNAI3P08754 354 aa31.91■■■□□ 2.7
SSBP3-202ENST00000357475 MYH3P11055 1940 aa31.91■■■□□ 2.7
SSBP3-202ENST00000357475 CDHR2Q9BYE9 1310 aa31.91■■■□□ 2.7
SSBP3-202ENST00000357475 GTF2E1P29083 439 aaPredicted RBP31.9■■■□□ 2.7
SSBP3-202ENST00000357475 C3orf67Q6ZVT6 689 aa31.9■■■□□ 2.7
SSBP3-202ENST00000357475 SGIP1Q9BQI5 828 aa31.9■■■□□ 2.7
SSBP3-202ENST00000357475 NPHP1O15259 732 aa31.88■■■□□ 2.69
SSBP3-202ENST00000357475 GNAI2P04899 355 aa31.87■■■□□ 2.69
SSBP3-202ENST00000357475 PTGER2P43116 358 aa31.87■■■□□ 2.69
SSBP3-202ENST00000357475 FOXO4P98177 505 aa31.87■■■□□ 2.69
SSBP3-202ENST00000357475 BICC1Q9H694 974 aaKnown RBP31.87■■■□□ 2.69
SSBP3-202ENST00000357475 SLC10A5Q5PT55 438 aa31.85■■■□□ 2.69
SSBP3-202ENST00000357475 ANKRD44Q8N8A2 993 aa31.85■■■□□ 2.69
SSBP3-202ENST00000357475 PLA2G12BQ9BX93 195 aa31.84■■■□□ 2.69
SSBP3-202ENST00000357475 PCDHB15Q9Y5E8 787 aa31.84■■■□□ 2.69
SSBP3-202ENST00000357475 ST5P78524 1137 aa31.83■■■□□ 2.69
SSBP3-202ENST00000357475 CCDC85AQ96PX6 553 aaPredicted RBP31.83■■■□□ 2.69
SSBP3-202ENST00000357475 PDE8AO60658 829 aa31.82■■■□□ 2.68
SSBP3-202ENST00000357475 CHMP4BQ9H444 224 aaKnown RBP31.82■■■□□ 2.68
SSBP3-202ENST00000357475 POLD1P28340 1107 aa31.81■■■□□ 2.68
SSBP3-202ENST00000357475 TAF1P21675 1872 aa31.81■■■□□ 2.68
SSBP3-202ENST00000357475 COL11A2P13942 1736 aaPredicted RBP31.81■■■□□ 2.68
SSBP3-202ENST00000357475 CTSWP56202 376 aa31.8■■■□□ 2.68
SSBP3-202ENST00000357475 LMBR1LQ6UX01 489 aa31.8■■■□□ 2.68
SSBP3-202ENST00000357475 COL4A1P02462 1669 aa31.8■■■□□ 2.68
SSBP3-202ENST00000357475 CEP85Q6P2H3 762 aa31.8■■■□□ 2.68
SSBP3-202ENST00000357475 KIF13BQ9NQT8 1826 aa31.79■■■□□ 2.68
SSBP3-202ENST00000357475 C10orf71Q711Q0 1435 aa31.79■■■□□ 2.68
SSBP3-202ENST00000357475 RABL6Q3YEC7 729 aaPredicted RBP31.79■■■□□ 2.68
SSBP3-202ENST00000357475 SIRT2Q8IXJ6 389 aa31.79■■■□□ 2.68
SSBP3-202ENST00000357475 TTLL11Q8NHH1 800 aa31.79■■■□□ 2.68
SSBP3-202ENST00000357475 SPON1Q9HCB6 807 aa31.79■■■□□ 2.68
SSBP3-202ENST00000357475 RIC1Q4ADV7 1423 aa31.79■■■□□ 2.68
SSBP3-202ENST00000357475 PNMA6EA0A0J9YXQ4 647 aa31.77■■■□□ 2.68
SSBP3-202ENST00000357475 CSF1RP07333 972 aa31.77■■■□□ 2.68
SSBP3-202ENST00000357475 BRIP1Q9BX63 1249 aa31.76■■■□□ 2.68
SSBP3-202ENST00000357475 GREM2Q9H772 168 aa31.76■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms