RNA–Protein interactions for RNA: ENST00000357396.7

CEACAM3-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-202ENST00000357396 UTP14AQ9BVJ6 771 aaKnown RBP25.5■■□□□ 1.67
CEACAM3-202ENST00000357396 STK31Q9BXU1 1019 aa25.5■■□□□ 1.67
CEACAM3-202ENST00000357396 CRY2Q49AN0 593 aa25.49■■□□□ 1.67
CEACAM3-202ENST00000357396 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
CEACAM3-202ENST00000357396 NLRP10Q86W26 655 aa25.49■■□□□ 1.67
CEACAM3-202ENST00000357396 FER1L6Q2WGJ9 1857 aa25.49■■□□□ 1.67
CEACAM3-202ENST00000357396 DDX58O95786 925 aaKnown RBP25.47■■□□□ 1.67
CEACAM3-202ENST00000357396 SOGA3Q5TF21 947 aa25.47■■□□□ 1.67
CEACAM3-202ENST00000357396 PRPF40BQ6NWY9 871 aaKnown RBP25.47■■□□□ 1.67
CEACAM3-202ENST00000357396 PHAXQ9H814 394 aaKnown RBP25.47■■□□□ 1.67
CEACAM3-202ENST00000357396 RIC3Q7Z5B4 369 aa25.46■■□□□ 1.67
CEACAM3-202ENST00000357396 ISCA1Q9BUE6 129 aa25.46■■□□□ 1.67
CEACAM3-202ENST00000357396 ALDH1B1P30837 517 aa25.45■■□□□ 1.66
CEACAM3-202ENST00000357396 TRIM28Q13263 835 aaKnown RBP25.45■■□□□ 1.66
CEACAM3-202ENST00000357396 SLC10A5Q5PT55 438 aa25.45■■□□□ 1.66
CEACAM3-202ENST00000357396 LAMB2P55268 1798 aa25.45■■□□□ 1.66
CEACAM3-202ENST00000357396 SPINK5Q9NQ38 1064 aaPredicted RBP25.44■■□□□ 1.66
CEACAM3-202ENST00000357396 CCDC88AQ3V6T2 1871 aa25.44■■□□□ 1.66
CEACAM3-202ENST00000357396 SH3TC1Q8TE82 1336 aa25.44■■□□□ 1.66
CEACAM3-202ENST00000357396 EXOSC9Q06265 439 aaKnown RBP25.43■■□□□ 1.66
CEACAM3-202ENST00000357396 NLRP3Q96P20 1036 aa25.43■■□□□ 1.66
CEACAM3-202ENST00000357396 TRMT112Q9UI30 125 aaKnown RBP25.43■■□□□ 1.66
CEACAM3-202ENST00000357396 C21orf2O43822 256 aa25.42■■□□□ 1.66
CEACAM3-202ENST00000357396 VAMP4O75379 141 aa25.42■■□□□ 1.66
CEACAM3-202ENST00000357396 HOXA10P31260 410 aaPredicted RBP25.42■■□□□ 1.66
CEACAM3-202ENST00000357396 RPGRQ92834 1020 aaKnown RBP25.42■■□□□ 1.66
CEACAM3-202ENST00000357396 DDX60Q8IY21 1712 aaKnown RBP25.42■■□□□ 1.66
CEACAM3-202ENST00000357396 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
CEACAM3-202ENST00000357396 DICER1Q9UPY3 1922 aaKnown RBP25.41■■□□□ 1.66
CEACAM3-202ENST00000357396 LTBP3Q9NS15 1303 aa25.41■■□□□ 1.66
CEACAM3-202ENST00000357396 ZC3H4Q9UPT8 1303 aaKnown RBP25.41■■□□□ 1.66
CEACAM3-202ENST00000357396 E9PSI1 815 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 ATP5J2-PTCD1G3V325 749 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 NFKBIEO00221 500 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 SLC4A2P04920 1241 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 LMNB1P20700 586 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 KSR2Q6VAB6 950 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 C7orf43Q8WVR3 580 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 RNF181Q9P0P0 153 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 TIAM2Q8IVF5 1701 aa25.39■■□□□ 1.66
CEACAM3-202ENST00000357396 RASSF7Q02833 373 aa25.38■■□□□ 1.65
CEACAM3-202ENST00000357396 RBM17Q96I25 401 aaKnown RBP25.38■■□□□ 1.65
CEACAM3-202ENST00000357396 CRAMP1Q96RY5 1269 aa25.38■■□□□ 1.65
CEACAM3-202ENST00000357396 METTL22Q9BUU2 404 aaPredicted RBP25.38■■□□□ 1.65
CEACAM3-202ENST00000357396 CCDC93Q567U6 631 aa25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 CCDC191Q8NCU4 936 aa25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 TCERG1O14776 1098 aaKnown RBP25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 MYD88Q99836 296 aa25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 TAOK3Q9H2K8 898 aa25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 ZNF219Q9P2Y4 722 aaPredicted RBP25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 MAP3K2Q9Y2U5 619 aa25.37■■□□□ 1.65
CEACAM3-202ENST00000357396 PI4KAP2A4QPH2 592 aa25.36■■□□□ 1.65
CEACAM3-202ENST00000357396 HSP90B1P14625 803 aaKnown RBP25.36■■□□□ 1.65
CEACAM3-202ENST00000357396 FLIIQ13045 1269 aa25.36■■□□□ 1.65
CEACAM3-202ENST00000357396 MIER1Q8N108 512 aa25.36■■□□□ 1.65
CEACAM3-202ENST00000357396 PI4KAP1Q8N8J0 262 aa25.36■■□□□ 1.65
CEACAM3-202ENST00000357396 GPBP1L1Q9HC44 474 aaPredicted RBP25.36■■□□□ 1.65
CEACAM3-202ENST00000357396 NEXNQ0ZGT2 675 aa25.35■■□□□ 1.65
CEACAM3-202ENST00000357396 GRIPAP1Q4V328 841 aa25.35■■□□□ 1.65
CEACAM3-202ENST00000357396 CC2D2BQ6DHV5 1058 aa25.35■■□□□ 1.65
CEACAM3-202ENST00000357396 C3orf67Q6ZVT6 689 aa25.35■■□□□ 1.65
CEACAM3-202ENST00000357396 RTKN2Q8IZC4 609 aa25.35■■□□□ 1.65
CEACAM3-202ENST00000357396 ZBTB38Q8NAP3 1195 aaPredicted RBP25.35■■□□□ 1.65
CEACAM3-202ENST00000357396 HCLS1P14317 486 aaPredicted RBP25.34■■□□□ 1.65
CEACAM3-202ENST00000357396 G2E3Q7L622 706 aa25.34■■□□□ 1.65
CEACAM3-202ENST00000357396 FAM89AQ96GI7 184 aa25.34■■□□□ 1.65
CEACAM3-202ENST00000357396 CWC25Q9NXE8 425 aaPredicted RBP25.34■■□□□ 1.65
CEACAM3-202ENST00000357396 SYNE4Q8N205 404 aa25.33■■□□□ 1.64
CEACAM3-202ENST00000357396 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
CEACAM3-202ENST00000357396 FKBP5Q13451 457 aaPredicted RBP25.32■■□□□ 1.64
CEACAM3-202ENST00000357396 SNED1Q8TER0 1413 aa25.31■■□□□ 1.64
CEACAM3-202ENST00000357396 PCCAP05165 728 aaPredicted RBP25.31■■□□□ 1.64
CEACAM3-202ENST00000357396 PRELPP51888 382 aa25.31■■□□□ 1.64
CEACAM3-202ENST00000357396 FKBP4Q02790 459 aaKnown RBP eCLIP25.31■■□□□ 1.64
CEACAM3-202ENST00000357396 IRS4O14654 1257 aaPredicted RBP25.3■■□□□ 1.64
CEACAM3-202ENST00000357396 PPEF1O14829 653 aaPredicted RBP25.3■■□□□ 1.64
CEACAM3-202ENST00000357396 DDX46Q7L014 1031 aaKnown RBP25.3■■□□□ 1.64
CEACAM3-202ENST00000357396 ZNF526Q8TF50 670 aaPredicted RBP25.3■■□□□ 1.64
CEACAM3-202ENST00000357396 ABCC4O15439 1325 aa25.3■■□□□ 1.64
CEACAM3-202ENST00000357396 MYH3P11055 1940 aa25.29■■□□□ 1.64
CEACAM3-202ENST00000357396 SF3B3Q15393 1217 aaKnown RBP25.29■■□□□ 1.64
CEACAM3-202ENST00000357396 ZNF428Q96B54 188 aa25.29■■□□□ 1.64
CEACAM3-202ENST00000357396 KDM2BQ8NHM5 1336 aa25.29■■□□□ 1.64
CEACAM3-202ENST00000357396 BBOX1O75936 387 aa25.28■■□□□ 1.64
CEACAM3-202ENST00000357396 IGKV5-2P06315 115 aa25.28■■□□□ 1.64
CEACAM3-202ENST00000357396 PSMD1Q99460 953 aa25.28■■□□□ 1.64
CEACAM3-202ENST00000357396 TMX4Q9H1E5 349 aaPredicted RBP25.28■■□□□ 1.64
CEACAM3-202ENST00000357396 CDHR2Q9BYE9 1310 aa25.27■■□□□ 1.64
CEACAM3-202ENST00000357396 TMC4Q7Z404 712 aa25.27■■□□□ 1.64
CEACAM3-202ENST00000357396 DNAAF4Q8WXU2 420 aa25.27■■□□□ 1.64
CEACAM3-202ENST00000357396 TAF1P21675 1872 aa25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 LRRC37AA6NMS7 1700 aa25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 NEURL1BA8MQ27 555 aa25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 GRAPQ13588 217 aa25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 RTL5Q5HYW3 569 aaPredicted RBP25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 TRMT2AQ8IZ69 625 aaKnown RBP25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 GRAPLQ8TC17 118 aaPredicted RBP25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 ATP6V0A2Q9Y487 856 aa25.26■■□□□ 1.63
CEACAM3-202ENST00000357396 OLFM4Q6UX06 510 aa25.25■■□□□ 1.63
CEACAM3-202ENST00000357396 LINS1Q8NG48 757 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms