RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ZSWIM4Q9H7M6 989 aa18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 NUP153P49790 1475 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 CD109Q6YHK3 1445 aa18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 YEATS4O95619 227 aa18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 PTGS1P23219 599 aa18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 TIGD1Q96MW7 591 aa18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 SYT1P21579 422 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 SSRP1Q08945 709 aaKnown RBP18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 IFIT5Q13325 482 aaKnown RBP18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 MRPS27Q92552 414 aaKnown RBP18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 CALRP27797 417 aaKnown RBP18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 HAND2P61296 217 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 ATP2B2Q01814 1243 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 UBE3BQ7Z3V4 1068 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 PAFAH1B1P43034 410 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 LMAN1P49257 510 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 LRRC2Q9BYS8 371 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 PZPP20742 1482 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 SYKP43405 635 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 FKBP15Q5T1M5 1219 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 TAX1BP1Q86VP1 789 aa18.03■□□□□ 0.48
TRAPPC11-202ENST00000357207 KCNG4Q8TDN1 519 aa18.02■□□□□ 0.48
TRAPPC11-202ENST00000357207 ARFGAP3Q9NP61 516 aa18.02■□□□□ 0.48
TRAPPC11-202ENST00000357207 SNRKQ9NRH2 765 aa18.02■□□□□ 0.48
TRAPPC11-202ENST00000357207 MAP3K12Q12852 859 aa18.02■□□□□ 0.48
TRAPPC11-202ENST00000357207 ACEP12821 1306 aa18.02■□□□□ 0.48
TRAPPC11-202ENST00000357207 CFAP43Q8NDM7 1665 aa18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 KRT24Q2M2I5 525 aa18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 AOPEPQ8N6M6 819 aa18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 CTCFLQ8NI51 663 aaPredicted RBP18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 GTPBP4Q9BZE4 634 aaKnown RBP18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 V9GYY5 206 aaPredicted RBP18.02■□□□□ 0.47
TRAPPC11-202ENST00000357207 KDM5BQ9UGL1 1544 aa18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 IGHMBP2P38935 993 aaKnown RBP18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 MICU3Q86XE3 530 aa18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 USO1O60763 962 aaKnown RBP18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 ATP10BO94823 1461 aa18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
TRAPPC11-202ENST00000357207 STARD3NLO95772 234 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 TUBB4AP04350 444 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 NEFHP12036 1026 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 KANK3Q6NY19 840 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 RAB11FIP4Q86YS3 637 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 IQCA1Q86XH1 822 aa18■□□□□ 0.47
TRAPPC11-202ENST00000357207 KLF18A0A0U1RQI7 1052 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 CACNA2D4Q7Z3S7 1137 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 FAM107BQ9H098 131 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 RNF41Q9H4P4 317 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 METAP2P50579 478 aaKnown RBP eCLIP17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 TTC41PQ6P2S7 1318 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 TERF1P54274 439 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 DUOX2Q9NRD8 1548 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 BLMP54132 1417 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 Q6ZUG5 572 aa17.99■□□□□ 0.47
TRAPPC11-202ENST00000357207 RAPGEF6Q8TEU7 1601 aa17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 LUZP1Q86V48 1076 aa17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 FEZ1Q99689 392 aa17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 SRRTQ9BXP5 876 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 FANCAO15360 1455 aa17.98■□□□□ 0.47
TRAPPC11-202ENST00000357207 RANBP6O60518 1105 aaKnown RBP17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 LMBRD1Q9NUN5 540 aa17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 N4BP3O15049 544 aa17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 IGSF3O75054 1194 aa17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 ITSN2Q9NZM3 1697 aa17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 SOS1Q07889 1333 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 MCMDC2Q4G0Z9 681 aa17.97■□□□□ 0.47
TRAPPC11-202ENST00000357207 GRM8O00222 908 aa17.96■□□□□ 0.47
TRAPPC11-202ENST00000357207 CREB3L3Q68CJ9 461 aa17.96■□□□□ 0.47
TRAPPC11-202ENST00000357207 PLCD4Q9BRC7 762 aa17.96■□□□□ 0.47
TRAPPC11-202ENST00000357207 SEPT11Q9NVA2 429 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-202ENST00000357207 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
TRAPPC11-202ENST00000357207 ZBTB3Q9H5J0 574 aa17.96■□□□□ 0.47
TRAPPC11-202ENST00000357207 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 SLC26A6Q9BXS9 759 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 FOXO3O43524 673 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 SMAP1Q8IYB5 467 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 NLRP5P59047 1200 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms