RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NTSR2O95665 410 aa5.12□□□□□ -1.59
LIG4-201ENST00000356922 ERFEQ4G0M1 354 aa5.12□□□□□ -1.59
LIG4-201ENST00000356922 KIF6Q6ZMV9 814 aa5.12□□□□□ -1.59
LIG4-201ENST00000356922 WWC3Q9ULE0 1092 aa5.12□□□□□ -1.59
LIG4-201ENST00000356922 CLEC4GQ6UXB4 293 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 UBE3BQ7Z3V4 1068 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 SIRT2Q8IXJ6 389 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 LINS1Q8NG48 757 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 KIF16BQ96L93 1317 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 A0A087WZG4 1122 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 WTIPA6NIX2 430 aaPredicted RBP5.11□□□□□ -1.59
LIG4-201ENST00000356922 H7C1W4 665 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 TRIM28Q13263 835 aaKnown RBP5.11□□□□□ -1.59
LIG4-201ENST00000356922 ITPRIPQ8IWB1 547 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 PCDHB15Q9Y5E8 787 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 ABCC12Q96J65 1359 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 CASZ1Q86V15 1759 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 SERPINB2P05120 415 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 PRR5LQ6MZQ0 368 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 BCORQ6W2J9 1755 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 SUCLG2Q96I99 432 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 SETDB2Q96T68 719 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 SRCIN1Q9C0H9 1055 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 ZBTB40Q9NUA8 1239 aa5.11□□□□□ -1.59
LIG4-201ENST00000356922 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.11□□□□□ -1.59
LIG4-201ENST00000356922 TAF1P21675 1872 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 FOXO4P98177 505 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 MVPQ14764 893 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 KLHDC4Q8TBB5 520 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 API5Q9BZZ5 524 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 TRMT112Q9UI30 125 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 IPO8O15397 1037 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 DDX58O95786 925 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 CENPBP07199 599 aaPredicted RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 PDE3AQ14432 1141 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 NLGN1Q8N2Q7 840 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 SCN7AQ01118 1682 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 ATP10DQ9P241 1426 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 PNMA6EA0A0J9YXQ4 647 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 GRM8O00222 908 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 OLFM4Q6UX06 510 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 FTSJ3Q8IY81 847 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 CCDC191Q8NCU4 936 aa5.1□□□□□ -1.59
LIG4-201ENST00000356922 CWC25Q9NXE8 425 aaPredicted RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 LRRFIP2Q9Y608 721 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 AFDNP55196 1824 aaKnown RBP5.1□□□□□ -1.59
LIG4-201ENST00000356922 ANKRD44Q8N8A2 993 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 ZBTB38Q8NAP3 1195 aaPredicted RBP5.09□□□□□ -1.59
LIG4-201ENST00000356922 FLAD1Q8NFF5 587 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 CNKSR2Q8WXI2 1034 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 SEC31BQ9NQW1 1179 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 UTYO14607 1347 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 KCNA3P22001 575 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 CHRNA5P30532 468 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 SKAP1Q86WV1 359 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 NBPF5PQ86XG9 351 aaPredicted RBP5.09□□□□□ -1.59
LIG4-201ENST00000356922 MTFR1LQ9H019 292 aa5.09□□□□□ -1.59
LIG4-201ENST00000356922 BICC1Q9H694 974 aaKnown RBP5.09□□□□□ -1.59
LIG4-201ENST00000356922 IRS4O14654 1257 aaPredicted RBP5.09□□□□□ -1.6
LIG4-201ENST00000356922 NLGN2Q8NFZ4 835 aa5.09□□□□□ -1.6
LIG4-201ENST00000356922 ZNF594Q96JF6 807 aaPredicted RBP5.09□□□□□ -1.6
LIG4-201ENST00000356922 UTP14AQ9BVJ6 771 aaKnown RBP5.09□□□□□ -1.6
LIG4-201ENST00000356922 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.6
LIG4-201ENST00000356922 A0A0G2JLW4 131 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 IGHDP01880 384 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 PCCAP05165 728 aaPredicted RBP5.08□□□□□ -1.6
LIG4-201ENST00000356922 CCT4P50991 539 aaKnown RBP5.08□□□□□ -1.6
LIG4-201ENST00000356922 NEXNQ0ZGT2 675 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 TTLL11Q8NHH1 800 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 GREM2Q9H772 168 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 CEP350Q5VT06 3117 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 QSER1Q2KHR3 1735 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 TNRC6CQ9HCJ0 1690 aaKnown RBP5.08□□□□□ -1.6
LIG4-201ENST00000356922 SNAP23O00161 211 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 ALDH1L1O75891 902 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 LMBR1LQ6UX01 489 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 CHMP4AQ9BY43 222 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 PA2G4Q9UQ80 394 aaKnown RBP5.08□□□□□ -1.6
LIG4-201ENST00000356922 ANKRD36CQ5JPF3 1778 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 NPM3O75607 178 aaKnown RBP5.08□□□□□ -1.6
LIG4-201ENST00000356922 TPTE2Q6XPS3 522 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 SLC16A10Q8TF71 515 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 PPP1R1BQ9UD71 204 aaPredicted RBP5.08□□□□□ -1.6
LIG4-201ENST00000356922 ZNF652Q9Y2D9 606 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 ANKRD31Q8N7Z5 1873 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 SH3TC1Q8TE82 1336 aa5.08□□□□□ -1.6
LIG4-201ENST00000356922 RFX5P48382 616 aaPredicted RBP5.07□□□□□ -1.6
LIG4-201ENST00000356922 FAM161AQ3B820 660 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 SLC10A5Q5PT55 438 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 CNBD1Q8NA66 436 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 PUS3Q9BZE2 481 aaKnown RBP5.07□□□□□ -1.6
LIG4-201ENST00000356922 DDX60Q8IY21 1712 aaKnown RBP5.07□□□□□ -1.6
LIG4-201ENST00000356922 CSF1RP07333 972 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 HSP90AB3PQ58FF7 597 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 PPP1R42Q7Z4L9 355 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 CELF1Q92879 486 aaKnown RBP5.07□□□□□ -1.6
LIG4-201ENST00000356922 COL24A1Q17RW2 1714 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 NRXN2Q9P2S2 1712 aa5.07□□□□□ -1.6
LIG4-201ENST00000356922 KLRG2A4D1S0 409 aaPredicted RBP5.07□□□□□ -1.6
LIG4-201ENST00000356922 UBTFL1P0CB47 393 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms