RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
VAT1-201ENST00000355653 ELP1O95163 1332 aa18.04■□□□□ 0.48
VAT1-201ENST00000355653 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
VAT1-201ENST00000355653 CEP170BQ9Y4F5 1589 aaPredicted RBP18.03■□□□□ 0.48
VAT1-201ENST00000355653 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 FAM227BQ96M60 508 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 DDX19AQ9NUU7 478 aaKnown RBP18.03■□□□□ 0.48
VAT1-201ENST00000355653 CCDC171Q6TFL3 1326 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 PDCP20941 246 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 ARID5BQ14865 1188 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 NECTIN1Q15223 517 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 LEO1Q8WVC0 666 aaPredicted RBP18.03■□□□□ 0.48
VAT1-201ENST00000355653 TTC21AQ8NDW8 1320 aa18.03■□□□□ 0.48
VAT1-201ENST00000355653 ANXA1P04083 346 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 IFIT2P09913 472 aaKnown RBP18.02■□□□□ 0.48
VAT1-201ENST00000355653 TDRD7Q8NHU6 1098 aaKnown RBP18.02■□□□□ 0.48
VAT1-201ENST00000355653 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.48
VAT1-201ENST00000355653 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 DDX41Q9UJV9 622 aaKnown RBP18.02■□□□□ 0.48
VAT1-201ENST00000355653 TTC41PQ6P2S7 1318 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 NPHP3Q7Z494 1330 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 ADAMTS13Q76LX8 1427 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 USP27XA6NNY8 438 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 SYCP1Q15431 976 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
VAT1-201ENST00000355653 PI4KAP2A4QPH2 592 aa18.01■□□□□ 0.47
VAT1-201ENST00000355653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.01■□□□□ 0.47
VAT1-201ENST00000355653 PI4KAP1Q8N8J0 262 aa18.01■□□□□ 0.47
VAT1-201ENST00000355653 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
VAT1-201ENST00000355653 FLT4P35916 1363 aa18.01■□□□□ 0.47
VAT1-201ENST00000355653 CEBPZQ03701 1054 aaKnown RBP18.01■□□□□ 0.47
VAT1-201ENST00000355653 GOLGA6L19H0YKK7 550 aa18■□□□□ 0.47
VAT1-201ENST00000355653 KIF18AQ8NI77 898 aa18■□□□□ 0.47
VAT1-201ENST00000355653 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
VAT1-201ENST00000355653 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
VAT1-201ENST00000355653 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
VAT1-201ENST00000355653 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
VAT1-201ENST00000355653 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
VAT1-201ENST00000355653 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
VAT1-201ENST00000355653 GPATCH3Q96I76 525 aa18■□□□□ 0.47
VAT1-201ENST00000355653 TRMT1Q9NXH9 659 aaKnown RBP18■□□□□ 0.47
VAT1-201ENST00000355653 TAF6LQ9Y6J9 622 aa18■□□□□ 0.47
VAT1-201ENST00000355653 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
VAT1-201ENST00000355653 KDRP35968 1356 aa18■□□□□ 0.47
VAT1-201ENST00000355653 USP31Q70CQ4 1352 aa18■□□□□ 0.47
VAT1-201ENST00000355653 SLC27A2O14975 620 aa18■□□□□ 0.47
VAT1-201ENST00000355653 NMIQ13287 307 aaPredicted RBP18■□□□□ 0.47
VAT1-201ENST00000355653 AACSQ86V21 672 aa18■□□□□ 0.47
VAT1-201ENST00000355653 DDX11Q96FC9 970 aa18■□□□□ 0.47
VAT1-201ENST00000355653 PGBD1Q96JS3 809 aa18■□□□□ 0.47
VAT1-201ENST00000355653 CHPF2Q9P2E5 772 aa18■□□□□ 0.47
VAT1-201ENST00000355653 ZNF215Q9UL58 517 aaPredicted RBP18■□□□□ 0.47
VAT1-201ENST00000355653 PSMA5P28066 241 aa17.99■□□□□ 0.47
VAT1-201ENST00000355653 DNAAF4Q8WXU2 420 aa17.99■□□□□ 0.47
VAT1-201ENST00000355653 NPHP1O15259 732 aa17.99■□□□□ 0.47
VAT1-201ENST00000355653 GABPB1Q06547 395 aaPredicted RBP17.99■□□□□ 0.47
VAT1-201ENST00000355653 FILIP1Q7Z7B0 1213 aa17.99■□□□□ 0.47
VAT1-201ENST00000355653 LRRC8AQ8IWT6 810 aa17.99■□□□□ 0.47
VAT1-201ENST00000355653 EVI5LQ96CN4 794 aa17.99■□□□□ 0.47
VAT1-201ENST00000355653 SBNO1A3KN83 1393 aa17.98■□□□□ 0.47
VAT1-201ENST00000355653 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
VAT1-201ENST00000355653 BEND3Q5T5X7 828 aa17.98■□□□□ 0.47
VAT1-201ENST00000355653 A0A087WWV3 80 aa17.98■□□□□ 0.47
VAT1-201ENST00000355653 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
VAT1-201ENST00000355653 KMT5BQ4FZB7 885 aa17.98■□□□□ 0.47
VAT1-201ENST00000355653 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
VAT1-201ENST00000355653 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
VAT1-201ENST00000355653 JAK2O60674 1132 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 SLFN14P0C7P3 912 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 SKILP12757 684 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 FOSBP53539 338 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 RBM43Q6ZSC3 357 aaKnown RBP17.97■□□□□ 0.47
VAT1-201ENST00000355653 KCNB2Q92953 911 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 FBXW7Q969H0 707 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 C11orf57Q6ZUT1 292 aaPredicted RBP17.97■□□□□ 0.47
VAT1-201ENST00000355653 USHBP1Q8N6Y0 703 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
VAT1-201ENST00000355653 MORC2Q9Y6X9 1032 aaPredicted RBP17.97■□□□□ 0.47
VAT1-201ENST00000355653 PTPRUQ92729 1446 aa17.96■□□□□ 0.47
VAT1-201ENST00000355653 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
VAT1-201ENST00000355653 ELF2Q15723 593 aa17.96■□□□□ 0.47
VAT1-201ENST00000355653 KRT222Q8N1A0 295 aa17.96■□□□□ 0.47
VAT1-201ENST00000355653 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
VAT1-201ENST00000355653 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
VAT1-201ENST00000355653 H3BQV1 296 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 RPS6KB1P23443 525 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 FGD1P98174 961 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 TOB2Q14106 344 aaPredicted RBP17.95■□□□□ 0.46
VAT1-201ENST00000355653 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 ZNF397Q8NF99 534 aaPredicted RBP17.95■□□□□ 0.46
VAT1-201ENST00000355653 BECN2A8MW95 431 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 NLRP6P59044 892 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 FSD1Q9BTV5 496 aa17.95■□□□□ 0.46
VAT1-201ENST00000355653 ZBTB22O15209 634 aa17.94■□□□□ 0.46
VAT1-201ENST00000355653 TAF3Q5VWG9 929 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms