RNA–Protein interactions for RNA: ENST00000355556.6

HTR3A-202, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-202ENST00000355556 COPRSQ9NQ92 184 aa18.37■□□□□ 0.53
HTR3A-202ENST00000355556 MCTP1Q6DN14 999 aa18.37■□□□□ 0.53
HTR3A-202ENST00000355556 COL15A1P39059 1388 aa18.36■□□□□ 0.53
HTR3A-202ENST00000355556 A0A087WZG4 1122 aa18.36■□□□□ 0.53
HTR3A-202ENST00000355556 CASP7P55210 303 aa18.36■□□□□ 0.53
HTR3A-202ENST00000355556 PTPN12Q05209 780 aaKnown RBP18.36■□□□□ 0.53
HTR3A-202ENST00000355556 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
HTR3A-202ENST00000355556 SHANK3Q9BYB0 1731 aa18.36■□□□□ 0.53
HTR3A-202ENST00000355556 PTH1RQ03431 593 aa18.35■□□□□ 0.53
HTR3A-202ENST00000355556 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
HTR3A-202ENST00000355556 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
HTR3A-202ENST00000355556 KCPQ6ZWJ8 1503 aa18.34■□□□□ 0.53
HTR3A-202ENST00000355556 KLHL40Q2TBA0 621 aa18.34■□□□□ 0.53
HTR3A-202ENST00000355556 TTC14Q96N46 770 aa18.34■□□□□ 0.53
HTR3A-202ENST00000355556 LMBRD1Q9NUN5 540 aa18.34■□□□□ 0.53
HTR3A-202ENST00000355556 TTLL7Q6ZT98 887 aa18.34■□□□□ 0.53
HTR3A-202ENST00000355556 A1BGP04217 495 aa18.33■□□□□ 0.53
HTR3A-202ENST00000355556 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.53
HTR3A-202ENST00000355556 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.53
HTR3A-202ENST00000355556 PAPPAQ13219 1627 aa18.33■□□□□ 0.52
HTR3A-202ENST00000355556 MRE11P49959 708 aa18.33■□□□□ 0.52
HTR3A-202ENST00000355556 GAS2L3Q86XJ1 694 aa18.33■□□□□ 0.52
HTR3A-202ENST00000355556 EVA1CP58658 441 aa18.32■□□□□ 0.52
HTR3A-202ENST00000355556 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
HTR3A-202ENST00000355556 ISY1Q9ULR0 285 aaKnown RBP18.32■□□□□ 0.52
HTR3A-202ENST00000355556 H7C1W4 665 aa18.32■□□□□ 0.52
HTR3A-202ENST00000355556 BRD1O95696 1058 aa18.32■□□□□ 0.52
HTR3A-202ENST00000355556 TFCP2Q12800 502 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 KCNB2Q92953 911 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 HIP1O00291 1037 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 FOXO4P98177 505 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 NMIQ13287 307 aaPredicted RBP18.31■□□□□ 0.52
HTR3A-202ENST00000355556 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 CHAMP1Q96JM3 812 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 GRPEL1Q9HAV7 217 aa18.31■□□□□ 0.52
HTR3A-202ENST00000355556 AK2P54819 239 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 TNNI3KQ59H18 835 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 LMBR1LQ6UX01 489 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
HTR3A-202ENST00000355556 FPGT-TNNI3KV9GXZ4 949 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 NHSL1Q5SYE7 1610 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
HTR3A-202ENST00000355556 ADCK5Q3MIX3 580 aa18.29■□□□□ 0.52
HTR3A-202ENST00000355556 PRPF40BQ6NWY9 871 aaKnown RBP18.29■□□□□ 0.52
HTR3A-202ENST00000355556 TNS2Q63HR2 1409 aa18.29■□□□□ 0.52
HTR3A-202ENST00000355556 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
HTR3A-202ENST00000355556 CPA1P15085 419 aa18.29■□□□□ 0.52
HTR3A-202ENST00000355556 CASTP20810 708 aaKnown RBP18.29■□□□□ 0.52
HTR3A-202ENST00000355556 FOXD4L5Q5VV16 416 aaPredicted RBP18.29■□□□□ 0.52
HTR3A-202ENST00000355556 FOXD4L4Q8WXT5 416 aaPredicted RBP18.29■□□□□ 0.52
HTR3A-202ENST00000355556 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
HTR3A-202ENST00000355556 ATP5JP18859 108 aa18.28■□□□□ 0.52
HTR3A-202ENST00000355556 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
HTR3A-202ENST00000355556 TOGARAM1Q9Y4F4 1720 aa18.28■□□□□ 0.52
HTR3A-202ENST00000355556 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
HTR3A-202ENST00000355556 FSD1Q9BTV5 496 aa18.28■□□□□ 0.52
HTR3A-202ENST00000355556 CWC25Q9NXE8 425 aaPredicted RBP18.28■□□□□ 0.52
HTR3A-202ENST00000355556 LIMCH1Q9UPQ0 1083 aa18.28■□□□□ 0.52
HTR3A-202ENST00000355556 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
HTR3A-202ENST00000355556 LARP6Q9BRS8 491 aaKnown RBP18.27■□□□□ 0.52
HTR3A-202ENST00000355556 ZBTB3Q9H5J0 574 aa18.27■□□□□ 0.52
HTR3A-202ENST00000355556 TM6SF1Q9BZW5 370 aa18.27■□□□□ 0.51
HTR3A-202ENST00000355556 ZSWIM6Q9HCJ5 1215 aa18.27■□□□□ 0.51
HTR3A-202ENST00000355556 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.51
HTR3A-202ENST00000355556 TJP1Q07157 1748 aa18.26■□□□□ 0.51
HTR3A-202ENST00000355556 JAKMIP1Q96N16 626 aaKnown RBP18.26■□□□□ 0.51
HTR3A-202ENST00000355556 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
HTR3A-202ENST00000355556 CREB3L3Q68CJ9 461 aa18.25■□□□□ 0.51
HTR3A-202ENST00000355556 ATG9AQ7Z3C6 839 aa18.25■□□□□ 0.51
HTR3A-202ENST00000355556 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
HTR3A-202ENST00000355556 DBNDD2Q9BQY9 259 aa18.25■□□□□ 0.51
HTR3A-202ENST00000355556 TMOD3Q9NYL9 352 aa18.25■□□□□ 0.51
HTR3A-202ENST00000355556 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
HTR3A-202ENST00000355556 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
HTR3A-202ENST00000355556 ZKSCAN1P17029 563 aaPredicted RBP18.24■□□□□ 0.51
HTR3A-202ENST00000355556 NCLP19338 710 aaKnown RBP18.24■□□□□ 0.51
HTR3A-202ENST00000355556 BTG4Q9NY30 223 aa18.24■□□□□ 0.51
HTR3A-202ENST00000355556 CHMP3Q9Y3E7 222 aa18.24■□□□□ 0.51
HTR3A-202ENST00000355556 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
HTR3A-202ENST00000355556 CAVIN1Q6NZI2 390 aaKnown RBP18.23■□□□□ 0.51
HTR3A-202ENST00000355556 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
HTR3A-202ENST00000355556 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
HTR3A-202ENST00000355556 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
HTR3A-202ENST00000355556 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
HTR3A-202ENST00000355556 LARGE1O95461 756 aa18.23■□□□□ 0.51
HTR3A-202ENST00000355556 PIGBQ92521 554 aa18.23■□□□□ 0.51
HTR3A-202ENST00000355556 SLC27A2O14975 620 aa18.22■□□□□ 0.51
HTR3A-202ENST00000355556 KCNJ4P48050 445 aa18.22■□□□□ 0.51
HTR3A-202ENST00000355556 HAUS7Q99871 368 aa18.22■□□□□ 0.51
HTR3A-202ENST00000355556 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
HTR3A-202ENST00000355556 RPAP1Q9BWH6 1393 aaPredicted RBP18.21■□□□□ 0.51
HTR3A-202ENST00000355556 JCADQ9P266 1359 aa18.21■□□□□ 0.51
HTR3A-202ENST00000355556 ZNF445P59923 1031 aa18.21■□□□□ 0.51
HTR3A-202ENST00000355556 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
HTR3A-202ENST00000355556 ZSCAN23Q3MJ62 389 aa18.21■□□□□ 0.51
HTR3A-202ENST00000355556 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
HTR3A-202ENST00000355556 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
HTR3A-202ENST00000355556 TCHHQ07283 1943 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms