RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 FOXO4P98177 505 aa28.11■■■□□ 2.09
SCAMP3-202ENST00000355379 JARID2Q92833 1246 aaPredicted RBP28.11■■■□□ 2.09
SCAMP3-202ENST00000355379 TBC1D32Q96NH3 1257 aa28.11■■■□□ 2.09
SCAMP3-202ENST00000355379 BCL11AQ9H165 835 aa28.11■■■□□ 2.09
SCAMP3-202ENST00000355379 PA2G4Q9UQ80 394 aaKnown RBP28.11■■■□□ 2.09
SCAMP3-202ENST00000355379 SDSP20132 328 aa28.1■■■□□ 2.09
SCAMP3-202ENST00000355379 RFX5P48382 616 aaPredicted RBP28.1■■■□□ 2.09
SCAMP3-202ENST00000355379 TBC1D9Q6ZT07 1266 aa28.1■■■□□ 2.09
SCAMP3-202ENST00000355379 DZIP3Q86Y13 1208 aaKnown RBP28.09■■■□□ 2.09
SCAMP3-202ENST00000355379 USP42Q9H9J4 1324 aaKnown RBP28.09■■■□□ 2.09
SCAMP3-202ENST00000355379 PCCAP05165 728 aaPredicted RBP28.08■■■□□ 2.09
SCAMP3-202ENST00000355379 CLASRPQ8N2M8 674 aaKnown RBP28.08■■■□□ 2.09
SCAMP3-202ENST00000355379 MSH5O43196 834 aa28.08■■■□□ 2.08
SCAMP3-202ENST00000355379 HLFQ16534 295 aa28.08■■■□□ 2.08
SCAMP3-202ENST00000355379 MFAP1P55081 439 aaKnown RBP28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 PTPN12Q05209 780 aaKnown RBP28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 LMBR1LQ6UX01 489 aa28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 ZBTB38Q8NAP3 1195 aaPredicted RBP28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 ARXQ96QS3 562 aa28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 PLA2G12BQ9BX93 195 aa28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 QTRT2Q9H974 415 aaKnown RBP28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 LY75O60449 1722 aa28.06■■■□□ 2.08
SCAMP3-202ENST00000355379 SASH1O94885 1247 aa28.05■■■□□ 2.08
SCAMP3-202ENST00000355379 NUTM1Q86Y26 1132 aa28.05■■■□□ 2.08
SCAMP3-202ENST00000355379 SEPT12Q8IYM1 358 aa28.05■■■□□ 2.08
SCAMP3-202ENST00000355379 TTC41PQ6P2S7 1318 aa28.05■■■□□ 2.08
SCAMP3-202ENST00000355379 CDHR2Q9BYE9 1310 aa28.05■■■□□ 2.08
SCAMP3-202ENST00000355379 NLRP10Q86W26 655 aa28.04■■■□□ 2.08
SCAMP3-202ENST00000355379 BCORQ6W2J9 1755 aa28.04■■■□□ 2.08
SCAMP3-202ENST00000355379 C22orf23Q9BZE7 217 aa28.03■■■□□ 2.08
SCAMP3-202ENST00000355379 AK9Q5TCS8 1911 aa28.03■■■□□ 2.08
SCAMP3-202ENST00000355379 CASC1Q6TDU7 716 aa28.02■■■□□ 2.08
SCAMP3-202ENST00000355379 TBC1D2BQ9UPU7 963 aa28.02■■■□□ 2.08
SCAMP3-202ENST00000355379 CNTNAP4Q9C0A0 1308 aa28.02■■■□□ 2.08
SCAMP3-202ENST00000355379 ZNF34Q8IZ26 560 aa28.02■■■□□ 2.08
SCAMP3-202ENST00000355379 MYH3P11055 1940 aa28.01■■■□□ 2.08
SCAMP3-202ENST00000355379 PI4K2BQ8TCG2 481 aa28.01■■■□□ 2.07
SCAMP3-202ENST00000355379 LINC00116Q8NCU8 138 aa28■■■□□ 2.07
SCAMP3-202ENST00000355379 IFIT2P09913 472 aaKnown RBP27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 RTL5Q5HYW3 569 aaPredicted RBP27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 RC3H1Q5TC82 1133 aaKnown RBP27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 TSHZ3Q63HK5 1081 aa27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 KLHDC4Q8TBB5 520 aa27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 GPATCH3Q96I76 525 aa27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 SIL1Q9H173 461 aa27.99■■■□□ 2.07
SCAMP3-202ENST00000355379 TAF1LQ8IZX4 1826 aa27.98■■■□□ 2.07
SCAMP3-202ENST00000355379 CAMTA2O94983 1202 aa27.98■■■□□ 2.07
SCAMP3-202ENST00000355379 RBM25P49756 843 aaKnown RBP27.98■■■□□ 2.07
SCAMP3-202ENST00000355379 PTF1AQ7RTS3 328 aa27.98■■■□□ 2.07
SCAMP3-202ENST00000355379 BRWD3Q6RI45 1802 aa27.98■■■□□ 2.07
SCAMP3-202ENST00000355379 ERC2O15083 957 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 RGL2O15211 777 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 CSF1RP07333 972 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 GPTP24298 496 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 GLRX3O76003 335 aaKnown RBP27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 AACSQ86V21 672 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 FAM89AQ96GI7 184 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 ECHDC1Q9NTX5 307 aa27.97■■■□□ 2.07
SCAMP3-202ENST00000355379 EAF2Q96CJ1 260 aaPredicted RBP27.96■■■□□ 2.07
SCAMP3-202ENST00000355379 CHMP3Q9Y3E7 222 aa27.96■■■□□ 2.07
SCAMP3-202ENST00000355379 FAM182BQ5T319 152 aa27.95■■■□□ 2.06
SCAMP3-202ENST00000355379 FBXO3Q9UK99 471 aa27.95■■■□□ 2.06
SCAMP3-202ENST00000355379 CIAO1O76071 339 aa27.94■■■□□ 2.06
SCAMP3-202ENST00000355379 PARP10Q53GL7 1025 aa27.94■■■□□ 2.06
SCAMP3-202ENST00000355379 BCL11BQ9C0K0 894 aaPredicted RBP27.94■■■□□ 2.06
SCAMP3-202ENST00000355379 UBN2Q6ZU65 1347 aa27.94■■■□□ 2.06
SCAMP3-202ENST00000355379 TRIM6-TRIM34B2RNG4 842 aa27.93■■■□□ 2.06
SCAMP3-202ENST00000355379 AK7Q96M32 723 aa27.93■■■□□ 2.06
SCAMP3-202ENST00000355379 SCN7AQ01118 1682 aa27.93■■■□□ 2.06
SCAMP3-202ENST00000355379 TRMT112Q9UI30 125 aaKnown RBP27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 ZNF652Q9Y2D9 606 aa27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 LAMB2P55268 1798 aa27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 IL15P40933 162 aaPredicted RBP27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 CLEC4GQ6UXB4 293 aa27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 RILPL2Q969X0 211 aa27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 GPR108Q9NPR9 543 aa27.92■■■□□ 2.06
SCAMP3-202ENST00000355379 EYA2O00167 538 aa27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 TFCP2Q12800 502 aa27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 CCDC57Q2TAC2 916 aa27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 ZNF772Q68DY9 489 aaPredicted RBP27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 ATG9AQ7Z3C6 839 aa27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 CNTROBQ8N137 903 aa27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 CCNL1Q9UK58 526 aaPredicted RBP27.91■■■□□ 2.06
SCAMP3-202ENST00000355379 IRS4O14654 1257 aaPredicted RBP27.9■■■□□ 2.06
SCAMP3-202ENST00000355379 PDE8AO60658 829 aa27.9■■■□□ 2.06
SCAMP3-202ENST00000355379 RPS6KA4O75676 772 aa27.9■■■□□ 2.06
SCAMP3-202ENST00000355379 TNNI3KQ59H18 835 aa27.9■■■□□ 2.06
SCAMP3-202ENST00000355379 FPGT-TNNI3KV9GXZ4 949 aa27.9■■■□□ 2.06
SCAMP3-202ENST00000355379 CHMLP26374 656 aa27.89■■■□□ 2.06
SCAMP3-202ENST00000355379 FAM196AQ6ZSG2 479 aa27.89■■■□□ 2.06
SCAMP3-202ENST00000355379 REC8O95072 547 aa27.88■■■□□ 2.05
SCAMP3-202ENST00000355379 CTSWP56202 376 aa27.88■■■□□ 2.05
SCAMP3-202ENST00000355379 KRT27Q7Z3Y8 459 aa27.88■■■□□ 2.05
SCAMP3-202ENST00000355379 CCDC8Q9H0W5 538 aaPredicted RBP27.88■■■□□ 2.05
SCAMP3-202ENST00000355379 SUSD4Q5VX71 490 aa27.87■■■□□ 2.05
SCAMP3-202ENST00000355379 TTLL11Q8NHH1 800 aa27.87■■■□□ 2.05
SCAMP3-202ENST00000355379 UTP14AQ9BVJ6 771 aaKnown RBP27.87■■■□□ 2.05
SCAMP3-202ENST00000355379 DDX60Q8IY21 1712 aaKnown RBP27.87■■■□□ 2.05
SCAMP3-202ENST00000355379 IFIT5Q13325 482 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms