RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LOC102724428A0A0B4J2F2 783 aa21.14■□□□□ 0.98
VPS13B-201ENST00000355155 ATP5J2-PTCD1G3V325 749 aa21.14■□□□□ 0.98
VPS13B-201ENST00000355155 HSPA1LP34931 641 aa21.14■□□□□ 0.98
VPS13B-201ENST00000355155 SIK1P57059 783 aa21.14■□□□□ 0.98
VPS13B-201ENST00000355155 FAM98CQ17RN3 349 aaKnown RBP21.14■□□□□ 0.98
VPS13B-201ENST00000355155 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.97
VPS13B-201ENST00000355155 TAF1LQ8IZX4 1826 aa21.14■□□□□ 0.97
VPS13B-201ENST00000355155 MFAP1P55081 439 aaKnown RBP21.14■□□□□ 0.97
VPS13B-201ENST00000355155 CASC1Q6TDU7 716 aa21.14■□□□□ 0.97
VPS13B-201ENST00000355155 CLASRPQ8N2M8 674 aaKnown RBP21.14■□□□□ 0.97
VPS13B-201ENST00000355155 APBB1O00213 710 aa21.13■□□□□ 0.97
VPS13B-201ENST00000355155 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
VPS13B-201ENST00000355155 CCDC87Q9NVE4 849 aa21.13■□□□□ 0.97
VPS13B-201ENST00000355155 G3BP1Q13283 466 aaKnown RBP eCLIP21.13■□□□□ 0.97
VPS13B-201ENST00000355155 ZBTB38Q8NAP3 1195 aaPredicted RBP21.13■□□□□ 0.97
VPS13B-201ENST00000355155 ZBTB3Q9H5J0 574 aa21.13■□□□□ 0.97
VPS13B-201ENST00000355155 CSF1RP07333 972 aa21.12■□□□□ 0.97
VPS13B-201ENST00000355155 GJD4Q96KN9 370 aaPredicted RBP21.12■□□□□ 0.97
VPS13B-201ENST00000355155 CCDC9Q9Y3X0 531 aaKnown RBP21.12■□□□□ 0.97
VPS13B-201ENST00000355155 CIAO1O76071 339 aa21.12■□□□□ 0.97
VPS13B-201ENST00000355155 AK7Q96M32 723 aa21.12■□□□□ 0.97
VPS13B-201ENST00000355155 PA2G4Q9UQ80 394 aaKnown RBP21.12■□□□□ 0.97
VPS13B-201ENST00000355155 CNTNAP4Q9C0A0 1308 aa21.12■□□□□ 0.97
VPS13B-201ENST00000355155 ZNF34Q8IZ26 560 aa21.11■□□□□ 0.97
VPS13B-201ENST00000355155 SNX21Q969T3 373 aa21.11■□□□□ 0.97
VPS13B-201ENST00000355155 IL1RAPL2Q9NP60 686 aa21.11■□□□□ 0.97
VPS13B-201ENST00000355155 GLRX3O76003 335 aaKnown RBP21.11■□□□□ 0.97
VPS13B-201ENST00000355155 ITPK1Q13572 414 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 TICAM2Q86XR7 235 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 IL27Q8NEV9 243 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 KIF2CQ99661 725 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 DDX60Q8IY21 1712 aaKnown RBP21.1■□□□□ 0.97
VPS13B-201ENST00000355155 SPEF2Q9C093 1822 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 NLRP10Q86W26 655 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 USP26Q9BXU7 913 aa21.1■□□□□ 0.97
VPS13B-201ENST00000355155 ERC2O15083 957 aa21.09■□□□□ 0.97
VPS13B-201ENST00000355155 BECN1Q14457 450 aa21.09■□□□□ 0.97
VPS13B-201ENST00000355155 SYTL4Q96C24 671 aaPredicted RBP21.09■□□□□ 0.97
VPS13B-201ENST00000355155 ECHDC1Q9NTX5 307 aa21.09■□□□□ 0.97
VPS13B-201ENST00000355155 CRKLP46109 303 aaKnown RBP21.09■□□□□ 0.97
VPS13B-201ENST00000355155 RC3H1Q5TC82 1133 aaKnown RBP21.09■□□□□ 0.97
VPS13B-201ENST00000355155 GPATCH3Q96I76 525 aa21.09■□□□□ 0.97
VPS13B-201ENST00000355155 TRPC5Q9UL62 973 aaPredicted RBP21.09■□□□□ 0.97
VPS13B-201ENST00000355155 CHMLP26374 656 aa21.08■□□□□ 0.97
VPS13B-201ENST00000355155 AFF2P51816 1311 aa21.08■□□□□ 0.97
VPS13B-201ENST00000355155 ATP6V1AP38606 617 aa21.08■□□□□ 0.96
VPS13B-201ENST00000355155 NUTM1Q86Y26 1132 aa21.08■□□□□ 0.96
VPS13B-201ENST00000355155 ACSBG1Q96GR2 724 aa21.08■□□□□ 0.96
VPS13B-201ENST00000355155 RFX7Q2KHR2 1363 aa21.08■□□□□ 0.96
VPS13B-201ENST00000355155 HLFQ16534 295 aa21.07■□□□□ 0.96
VPS13B-201ENST00000355155 LMBR1LQ6UX01 489 aa21.07■□□□□ 0.96
VPS13B-201ENST00000355155 REC8O95072 547 aa21.07■□□□□ 0.96
VPS13B-201ENST00000355155 OS9Q13438 667 aaPredicted RBP21.07■□□□□ 0.96
VPS13B-201ENST00000355155 DZIP3Q86Y13 1208 aaKnown RBP21.06■□□□□ 0.96
VPS13B-201ENST00000355155 EAF2Q96CJ1 260 aaPredicted RBP21.06■□□□□ 0.96
VPS13B-201ENST00000355155 ESYT1Q9BSJ8 1104 aa21.06■□□□□ 0.96
VPS13B-201ENST00000355155 ARAP2Q8WZ64 1704 aa21.06■□□□□ 0.96
VPS13B-201ENST00000355155 CAMTA2O94983 1202 aa21.06■□□□□ 0.96
VPS13B-201ENST00000355155 ATG9AQ7Z3C6 839 aa21.05■□□□□ 0.96
VPS13B-201ENST00000355155 SNRKQ9NRH2 765 aa21.05■□□□□ 0.96
VPS13B-201ENST00000355155 KCNQ2O43526 872 aa21.05■□□□□ 0.96
VPS13B-201ENST00000355155 CNTROBQ8N137 903 aa21.05■□□□□ 0.96
VPS13B-201ENST00000355155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.05■□□□□ 0.96
VPS13B-201ENST00000355155 RTL9Q8NET4 1388 aa21.04■□□□□ 0.96
VPS13B-201ENST00000355155 IFIT2P09913 472 aaKnown RBP21.04■□□□□ 0.96
VPS13B-201ENST00000355155 IL15P40933 162 aaPredicted RBP21.04■□□□□ 0.96
VPS13B-201ENST00000355155 ZNF609O15014 1411 aa21.04■□□□□ 0.96
VPS13B-201ENST00000355155 PARP10Q53GL7 1025 aa21.03■□□□□ 0.96
VPS13B-201ENST00000355155 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
VPS13B-201ENST00000355155 CLEC4GQ6UXB4 293 aa21.03■□□□□ 0.96
VPS13B-201ENST00000355155 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
VPS13B-201ENST00000355155 AACSQ86V21 672 aa21.03■□□□□ 0.96
VPS13B-201ENST00000355155 CASZ1Q86V15 1759 aa21.03■□□□□ 0.96
VPS13B-201ENST00000355155 TBC1D2Q9BYX2 928 aa21.02■□□□□ 0.96
VPS13B-201ENST00000355155 BRWD3Q6RI45 1802 aa21.02■□□□□ 0.96
VPS13B-201ENST00000355155 UBN2Q6ZU65 1347 aa21.02■□□□□ 0.96
VPS13B-201ENST00000355155 EYA2O00167 538 aa21.02■□□□□ 0.96
VPS13B-201ENST00000355155 TSHZ3Q63HK5 1081 aa21.02■□□□□ 0.96
VPS13B-201ENST00000355155 ATP5JP18859 108 aa21.01■□□□□ 0.95
VPS13B-201ENST00000355155 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
VPS13B-201ENST00000355155 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
VPS13B-201ENST00000355155 MEX3CQ5U5Q3 659 aaKnown RBP21.01■□□□□ 0.95
VPS13B-201ENST00000355155 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
VPS13B-201ENST00000355155 JARID2Q92833 1246 aaPredicted RBP21.01■□□□□ 0.95
VPS13B-201ENST00000355155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21■□□□□ 0.95
VPS13B-201ENST00000355155 C4AP0C0L4 1744 aa21■□□□□ 0.95
VPS13B-201ENST00000355155 ABCC12Q96J65 1359 aa21■□□□□ 0.95
VPS13B-201ENST00000355155 KLHDC4Q8TBB5 520 aa21■□□□□ 0.95
VPS13B-201ENST00000355155 ANAPC15P60006 121 aa20.99■□□□□ 0.95
VPS13B-201ENST00000355155 TFCP2Q12800 502 aa20.99■□□□□ 0.95
VPS13B-201ENST00000355155 KAT6BQ8WYB5 2073 aa20.99■□□□□ 0.95
VPS13B-201ENST00000355155 PDE8AO60658 829 aa20.99■□□□□ 0.95
VPS13B-201ENST00000355155 ANP32EQ9BTT0 268 aa20.99■□□□□ 0.95
VPS13B-201ENST00000355155 HIP1O00291 1037 aa20.98■□□□□ 0.95
VPS13B-201ENST00000355155 RABEP1Q15276 862 aa20.98■□□□□ 0.95
VPS13B-201ENST00000355155 ERICH6Q7L0X2 663 aa20.98■□□□□ 0.95
VPS13B-201ENST00000355155 SGSM2O43147 1006 aa20.98■□□□□ 0.95
VPS13B-201ENST00000355155 CTSWP56202 376 aa20.98■□□□□ 0.95
VPS13B-201ENST00000355155 TTLL11Q8NHH1 800 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms