RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.7
CTSA-202ENST00000354880 CLEC4GQ6UXB4 293 aa19.39■□□□□ 0.7
CTSA-202ENST00000354880 PROM2Q8N271 834 aa19.39■□□□□ 0.7
CTSA-202ENST00000354880 PCCAP05165 728 aaPredicted RBP19.39■□□□□ 0.69
CTSA-202ENST00000354880 EPHA10Q5JZY3 1008 aa19.39■□□□□ 0.69
CTSA-202ENST00000354880 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.69
CTSA-202ENST00000354880 LNPKQ9C0E8 428 aa19.39■□□□□ 0.69
CTSA-202ENST00000354880 TNS1Q9HBL0 1735 aaKnown RBP19.38■□□□□ 0.69
CTSA-202ENST00000354880 RGL2O15211 777 aa19.38■□□□□ 0.69
CTSA-202ENST00000354880 RABL6Q3YEC7 729 aaPredicted RBP19.38■□□□□ 0.69
CTSA-202ENST00000354880 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
CTSA-202ENST00000354880 NARFQ9UHQ1 456 aa19.38■□□□□ 0.69
CTSA-202ENST00000354880 EXOC6BQ9Y2D4 811 aa19.38■□□□□ 0.69
CTSA-202ENST00000354880 UBN2Q6ZU65 1347 aa19.37■□□□□ 0.69
CTSA-202ENST00000354880 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
CTSA-202ENST00000354880 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
CTSA-202ENST00000354880 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
CTSA-202ENST00000354880 SCN7AQ01118 1682 aa19.37■□□□□ 0.69
CTSA-202ENST00000354880 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
CTSA-202ENST00000354880 ZPR1O75312 459 aa19.36■□□□□ 0.69
CTSA-202ENST00000354880 SURF6O75683 361 aaKnown RBP19.36■□□□□ 0.69
CTSA-202ENST00000354880 PARP10Q53GL7 1025 aa19.36■□□□□ 0.69
CTSA-202ENST00000354880 TRAPPC3LQ5T215 181 aa19.36■□□□□ 0.69
CTSA-202ENST00000354880 ARHGEF1Q92888 912 aaKnown RBP19.36■□□□□ 0.69
CTSA-202ENST00000354880 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
CTSA-202ENST00000354880 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
CTSA-202ENST00000354880 APBB1O00213 710 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 ADRA2BP18089 450 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 PDE4AP27815 886 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 FOXO4P98177 505 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 UBR3Q6ZT12 1888 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 CDHR2Q9BYE9 1310 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 PHF14O94880 888 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
CTSA-202ENST00000354880 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
CTSA-202ENST00000354880 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
CTSA-202ENST00000354880 RFC4P35249 363 aa19.34■□□□□ 0.69
CTSA-202ENST00000354880 HSP90AB4PQ58FF6 505 aa19.34■□□□□ 0.69
CTSA-202ENST00000354880 LMBR1LQ6UX01 489 aa19.34■□□□□ 0.69
CTSA-202ENST00000354880 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
CTSA-202ENST00000354880 C4AP0C0L4 1744 aa19.33■□□□□ 0.69
CTSA-202ENST00000354880 SUSD4Q5VX71 490 aa19.33■□□□□ 0.69
CTSA-202ENST00000354880 PLA2G12BQ9BX93 195 aa19.33■□□□□ 0.69
CTSA-202ENST00000354880 LRRCC1Q9C099 1032 aa19.33■□□□□ 0.69
CTSA-202ENST00000354880 BCL2L12Q9HB09 334 aa19.33■□□□□ 0.69
CTSA-202ENST00000354880 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.69
CTSA-202ENST00000354880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.32■□□□□ 0.68
CTSA-202ENST00000354880 RAB11FIP3O75154 756 aa19.32■□□□□ 0.68
CTSA-202ENST00000354880 SSFA2P28290 1259 aa19.32■□□□□ 0.68
CTSA-202ENST00000354880 UTP14AQ9BVJ6 771 aaKnown RBP19.32■□□□□ 0.68
CTSA-202ENST00000354880 USP42Q9H9J4 1324 aaKnown RBP19.32■□□□□ 0.68
CTSA-202ENST00000354880 SMARCA5O60264 1052 aaPredicted RBP19.32■□□□□ 0.68
CTSA-202ENST00000354880 SYNE4Q8N205 404 aa19.32■□□□□ 0.68
CTSA-202ENST00000354880 PA2G4Q9UQ80 394 aaKnown RBP19.32■□□□□ 0.68
CTSA-202ENST00000354880 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
CTSA-202ENST00000354880 FAM177BA6PVY3 158 aa19.3■□□□□ 0.68
CTSA-202ENST00000354880 CHMP3Q9Y3E7 222 aa19.3■□□□□ 0.68
CTSA-202ENST00000354880 SH3TC1Q8TE82 1336 aa19.3■□□□□ 0.68
CTSA-202ENST00000354880 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
CTSA-202ENST00000354880 OS9Q13438 667 aaPredicted RBP19.3■□□□□ 0.68
CTSA-202ENST00000354880 TBC1D9BQ66K14 1250 aa19.3■□□□□ 0.68
CTSA-202ENST00000354880 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
CTSA-202ENST00000354880 COPRSQ9NQ92 184 aa19.3■□□□□ 0.68
CTSA-202ENST00000354880 NTSR2O95665 410 aa19.29■□□□□ 0.68
CTSA-202ENST00000354880 PTPN12Q05209 780 aaKnown RBP19.29■□□□□ 0.68
CTSA-202ENST00000354880 RHPN1Q8TCX5 695 aa19.29■□□□□ 0.68
CTSA-202ENST00000354880 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
CTSA-202ENST00000354880 PDE8AO60658 829 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 CSF1RP07333 972 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
CTSA-202ENST00000354880 BICDL1Q6ZP65 573 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 ERC1Q8IUD2 1116 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 KLHDC4Q8TBB5 520 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 AKT1S1Q96B36 256 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 MYH3P11055 1940 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 C16orf71Q8IYS4 520 aaPredicted RBP19.28■□□□□ 0.68
CTSA-202ENST00000354880 TFCP2L1Q9NZI6 479 aa19.28■□□□□ 0.68
CTSA-202ENST00000354880 HSP90B1P14625 803 aaKnown RBP19.27■□□□□ 0.68
CTSA-202ENST00000354880 CTSWP56202 376 aa19.27■□□□□ 0.68
CTSA-202ENST00000354880 SF3B2Q13435 895 aaKnown RBP19.27■□□□□ 0.68
CTSA-202ENST00000354880 ZNF827Q17R98 1081 aa19.27■□□□□ 0.68
CTSA-202ENST00000354880 SIL1Q9H173 461 aa19.27■□□□□ 0.68
CTSA-202ENST00000354880 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
CTSA-202ENST00000354880 PLEKHM2Q8IWE5 1019 aa19.26■□□□□ 0.67
CTSA-202ENST00000354880 TTLL11Q8NHH1 800 aa19.26■□□□□ 0.67
CTSA-202ENST00000354880 CAMKK2Q96RR4 588 aa19.26■□□□□ 0.67
CTSA-202ENST00000354880 IL1RAPL2Q9NP60 686 aa19.26■□□□□ 0.67
CTSA-202ENST00000354880 CCDC57Q2TAC2 916 aa19.25■□□□□ 0.67
CTSA-202ENST00000354880 NUTM1Q86Y26 1132 aa19.25■□□□□ 0.67
CTSA-202ENST00000354880 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
CTSA-202ENST00000354880 HCLS1P14317 486 aaPredicted RBP19.25■□□□□ 0.67
CTSA-202ENST00000354880 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
CTSA-202ENST00000354880 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
CTSA-202ENST00000354880 NYXQ9GZU5 481 aa19.25■□□□□ 0.67
CTSA-202ENST00000354880 GYS1P13807 737 aa19.24■□□□□ 0.67
CTSA-202ENST00000354880 BAG6P46379 1132 aa19.24■□□□□ 0.67
CTSA-202ENST00000354880 OTUD7AQ8TE49 926 aaPredicted RBP19.24■□□□□ 0.67
CTSA-202ENST00000354880 LAMB2P55268 1798 aa19.24■□□□□ 0.67
CTSA-202ENST00000354880 DDX60Q8IY21 1712 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms