RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.44■■□□□ 1.34
COL13A1-201ENST00000354547 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
COL13A1-201ENST00000354547 TAF6LQ9Y6J9 622 aa23.44■■□□□ 1.34
COL13A1-201ENST00000354547 FERMT3Q86UX7 667 aa23.44■■□□□ 1.34
COL13A1-201ENST00000354547 PLCB2Q00722 1185 aa23.43■■□□□ 1.34
COL13A1-201ENST00000354547 NOL7Q9UMY1 257 aaKnown RBP23.43■■□□□ 1.34
COL13A1-201ENST00000354547 NECTIN1Q15223 517 aa23.43■■□□□ 1.34
COL13A1-201ENST00000354547 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
COL13A1-201ENST00000354547 USP54Q70EL1 1684 aa23.43■■□□□ 1.34
COL13A1-201ENST00000354547 CHRNA2Q15822 529 aa23.43■■□□□ 1.34
COL13A1-201ENST00000354547 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
COL13A1-201ENST00000354547 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 PTCD1O75127 700 aaKnown RBP23.42■■□□□ 1.34
COL13A1-201ENST00000354547 VPS53Q5VIR6 699 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 ZSWIM6Q9HCJ5 1215 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 ERBB3P21860 1342 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 PHF14O94880 888 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 STK3Q13188 491 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
COL13A1-201ENST00000354547 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
COL13A1-201ENST00000354547 R3HCC1Q9Y3T6 440 aaKnown RBP23.42■■□□□ 1.34
COL13A1-201ENST00000354547 NEURL1BA8MQ27 555 aa23.41■■□□□ 1.34
COL13A1-201ENST00000354547 CHGBP05060 677 aa23.41■■□□□ 1.34
COL13A1-201ENST00000354547 FAM173BQ6P4H8 233 aa23.41■■□□□ 1.34
COL13A1-201ENST00000354547 LMO7Q8WWI1 1683 aa23.41■■□□□ 1.34
COL13A1-201ENST00000354547 HCLS1P14317 486 aaPredicted RBP23.41■■□□□ 1.34
COL13A1-201ENST00000354547 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
COL13A1-201ENST00000354547 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
COL13A1-201ENST00000354547 ST3GAL1Q11201 340 aa23.4■■□□□ 1.34
COL13A1-201ENST00000354547 GCKRQ14397 625 aa23.4■■□□□ 1.34
COL13A1-201ENST00000354547 SLC27A2O14975 620 aa23.4■■□□□ 1.34
COL13A1-201ENST00000354547 UBE3BQ7Z3V4 1068 aa23.4■■□□□ 1.34
COL13A1-201ENST00000354547 ZNF589Q86UQ0 364 aaPredicted RBP23.4■■□□□ 1.34
COL13A1-201ENST00000354547 USP25Q9UHP3 1055 aa23.4■■□□□ 1.34
COL13A1-201ENST00000354547 GIMAP6Q6P9H5 292 aa23.39■■□□□ 1.34
COL13A1-201ENST00000354547 MTMR6Q9Y217 621 aa23.39■■□□□ 1.34
COL13A1-201ENST00000354547 OFD1O75665 1012 aa23.39■■□□□ 1.33
COL13A1-201ENST00000354547 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
COL13A1-201ENST00000354547 CCDC183Q5T5S1 534 aa23.39■■□□□ 1.33
COL13A1-201ENST00000354547 ZKSCAN5Q9Y2L8 839 aa23.39■■□□□ 1.33
COL13A1-201ENST00000354547 ANKRD13DQ6ZTN6 518 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 MAP4K1Q92918 833 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 NPHP3Q7Z494 1330 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 NCAPD2Q15021 1401 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 UBE2HP62256 183 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 LARP1BQ659C4 914 aaKnown RBP23.38■■□□□ 1.33
COL13A1-201ENST00000354547 TTC5Q8N0Z6 440 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 ZNF830Q96NB3 372 aaPredicted RBP23.38■■□□□ 1.33
COL13A1-201ENST00000354547 DNAJC2Q99543 621 aaKnown RBP23.38■■□□□ 1.33
COL13A1-201ENST00000354547 CCDC39Q9UFE4 941 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 HS1BP3Q53T59 392 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 ATP6V1DQ9Y5K8 247 aa23.38■■□□□ 1.33
COL13A1-201ENST00000354547 PHKG2P15735 406 aa23.36■■□□□ 1.33
COL13A1-201ENST00000354547 TFCP2Q12800 502 aa23.36■■□□□ 1.33
COL13A1-201ENST00000354547 BLOC1S2Q6QNY1 142 aa23.36■■□□□ 1.33
COL13A1-201ENST00000354547 ZSCAN31Q96LW9 406 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-201ENST00000354547 HSP90AA2PQ14568 343 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-201ENST00000354547 SH2B1Q9NRF2 756 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-201ENST00000354547 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.35■■□□□ 1.33
COL13A1-201ENST00000354547 METTL22Q9BUU2 404 aaPredicted RBP23.35■■□□□ 1.33
COL13A1-201ENST00000354547 CCDC129Q6ZRS4 1044 aa23.35■■□□□ 1.33
COL13A1-201ENST00000354547 TM6SF1Q9BZW5 370 aa23.35■■□□□ 1.33
COL13A1-201ENST00000354547 HIP1O00291 1037 aa23.35■■□□□ 1.33
COL13A1-201ENST00000354547 TMEM87AQ8NBN3 555 aa23.35■■□□□ 1.33
COL13A1-201ENST00000354547 NPHP4O75161 1426 aaPredicted RBP23.34■■□□□ 1.33
COL13A1-201ENST00000354547 UTYO14607 1347 aa23.34■■□□□ 1.33
COL13A1-201ENST00000354547 CDC37L1Q7L3B6 337 aa23.34■■□□□ 1.33
COL13A1-201ENST00000354547 SEC62Q99442 399 aaKnown RBP23.34■■□□□ 1.33
COL13A1-201ENST00000354547 DBNLQ9UJU6 430 aaKnown RBP23.34■■□□□ 1.33
COL13A1-201ENST00000354547 PSMA5P28066 241 aa23.33■■□□□ 1.33
COL13A1-201ENST00000354547 A0A087WZG4 1122 aa23.33■■□□□ 1.33
COL13A1-201ENST00000354547 RGPD5Q99666 1765 aa23.33■■□□□ 1.32
COL13A1-201ENST00000354547 RNF20Q5VTR2 975 aa23.33■■□□□ 1.32
COL13A1-201ENST00000354547 KDM6AO15550 1401 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-201ENST00000354547 IFNL2Q8IZJ0 200 aa23.32■■□□□ 1.32
COL13A1-201ENST00000354547 TFIP11Q9UBB9 837 aaKnown RBP23.32■■□□□ 1.32
COL13A1-201ENST00000354547 ZNF500O60304 480 aaPredicted RBP23.31■■□□□ 1.32
COL13A1-201ENST00000354547 CAMK4Q16566 473 aa23.31■■□□□ 1.32
COL13A1-201ENST00000354547 DDX46Q7L014 1031 aaKnown RBP23.31■■□□□ 1.32
COL13A1-201ENST00000354547 DBNDD2Q9BQY9 259 aa23.31■■□□□ 1.32
COL13A1-201ENST00000354547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL13A1-201ENST00000354547 ADCY5O95622 1261 aa23.31■■□□□ 1.32
COL13A1-201ENST00000354547 SNRPA1P09661 255 aaKnown RBP23.31■■□□□ 1.32
COL13A1-201ENST00000354547 RBM10P98175 930 aaKnown RBP23.31■■□□□ 1.32
COL13A1-201ENST00000354547 SLFNL1Q499Z3 407 aa23.31■■□□□ 1.32
COL13A1-201ENST00000354547 KCNB2Q92953 911 aa23.31■■□□□ 1.32
COL13A1-201ENST00000354547 CYP27B1O15528 508 aa23.3■■□□□ 1.32
COL13A1-201ENST00000354547 LRRC2Q9BYS8 371 aa23.3■■□□□ 1.32
COL13A1-201ENST00000354547 PTPN12Q05209 780 aaKnown RBP23.3■■□□□ 1.32
COL13A1-201ENST00000354547 TNNI3KQ59H18 835 aa23.3■■□□□ 1.32
COL13A1-201ENST00000354547 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
COL13A1-201ENST00000354547 C19orf44Q9H6X5 657 aa23.3■■□□□ 1.32
COL13A1-201ENST00000354547 FPGT-TNNI3KV9GXZ4 949 aa23.3■■□□□ 1.32
COL13A1-201ENST00000354547 RPS6KB1P23443 525 aa23.29■■□□□ 1.32
COL13A1-201ENST00000354547 CABP4P57796 275 aa23.29■■□□□ 1.32
COL13A1-201ENST00000354547 TPM2P07951 284 aa23.29■■□□□ 1.32
COL13A1-201ENST00000354547 ATF3P18847 181 aa23.29■■□□□ 1.32
COL13A1-201ENST00000354547 SLIT3O75094 1523 aa23.29■■□□□ 1.32
COL13A1-201ENST00000354547 FOSBP53539 338 aa23.28■■□□□ 1.32
COL13A1-201ENST00000354547 TAF5LO75529 589 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms