RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 OS9Q13438 667 aaPredicted RBP25.4■■□□□ 1.66
TRIM4-202ENST00000354241 RXRBP28702 533 aa25.39■■□□□ 1.66
TRIM4-202ENST00000354241 NOP58Q9Y2X3 529 aaKnown RBP25.39■■□□□ 1.66
TRIM4-202ENST00000354241 RABL6Q3YEC7 729 aaPredicted RBP25.39■■□□□ 1.65
TRIM4-202ENST00000354241 NLRP10Q86W26 655 aa25.39■■□□□ 1.65
TRIM4-202ENST00000354241 TRIM37O94972 964 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 CAMTA2O94983 1202 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
TRIM4-202ENST00000354241 FOXO4P98177 505 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 RHPN1Q8TCX5 695 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 KIF1BPQ96EK5 621 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 BCORQ6W2J9 1755 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 RC3H1Q5TC82 1133 aaKnown RBP25.37■■□□□ 1.65
TRIM4-202ENST00000354241 LMBR1LQ6UX01 489 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 IL1RAPL2Q9NP60 686 aa25.37■■□□□ 1.65
TRIM4-202ENST00000354241 ZBTB38Q8NAP3 1195 aaPredicted RBP25.36■■□□□ 1.65
TRIM4-202ENST00000354241 FAM89AQ96GI7 184 aa25.36■■□□□ 1.65
TRIM4-202ENST00000354241 CHMP3Q9Y3E7 222 aa25.36■■□□□ 1.65
TRIM4-202ENST00000354241 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
TRIM4-202ENST00000354241 ZNF34Q8IZ26 560 aa25.35■■□□□ 1.65
TRIM4-202ENST00000354241 G3BP1Q13283 466 aaKnown RBP eCLIP25.34■■□□□ 1.65
TRIM4-202ENST00000354241 KLHDC4Q8TBB5 520 aa25.34■■□□□ 1.65
TRIM4-202ENST00000354241 GNPATO15228 680 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 UBN2Q6ZU65 1347 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 ERC1Q8IUD2 1116 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 SIL1Q9H173 461 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 C4BP0C0L5 1744 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 RPS6KA4O75676 772 aa25.33■■□□□ 1.65
TRIM4-202ENST00000354241 RFX5P48382 616 aaPredicted RBP25.32■■□□□ 1.64
TRIM4-202ENST00000354241 TTC22Q5TAA0 569 aa25.32■■□□□ 1.64
TRIM4-202ENST00000354241 RGS17Q9UGC6 210 aaPredicted RBP25.32■■□□□ 1.64
TRIM4-202ENST00000354241 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
TRIM4-202ENST00000354241 ZNF652Q9Y2D9 606 aa25.32■■□□□ 1.64
TRIM4-202ENST00000354241 SMIM5Q71RC9 77 aa25.31■■□□□ 1.64
TRIM4-202ENST00000354241 CDHR2Q9BYE9 1310 aa25.31■■□□□ 1.64
TRIM4-202ENST00000354241 PDE1AP54750 535 aa25.31■■□□□ 1.64
TRIM4-202ENST00000354241 GSPT1P15170 499 aaKnown RBP25.3■■□□□ 1.64
TRIM4-202ENST00000354241 SYNE4Q8N205 404 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 COPRSQ9NQ92 184 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 RTCBQ9Y3I0 505 aaKnown RBP25.3■■□□□ 1.64
TRIM4-202ENST00000354241 SCN7AQ01118 1682 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 SALL3Q9BXA9 1300 aa25.3■■□□□ 1.64
TRIM4-202ENST00000354241 MX1P20591 662 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 PTPN12Q05209 780 aaKnown RBP25.29■■□□□ 1.64
TRIM4-202ENST00000354241 NUTM1Q86Y26 1132 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 LRRC4BQ9NT99 713 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 MYH3P11055 1940 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 PLA2G12BQ9BX93 195 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 OSBPL3Q9H4L5 887 aa25.29■■□□□ 1.64
TRIM4-202ENST00000354241 NIP7Q9Y221 180 aaKnown RBP eCLIP25.29■■□□□ 1.64
TRIM4-202ENST00000354241 POTEAQ6S8J7 498 aa25.28■■□□□ 1.64
TRIM4-202ENST00000354241 AK7Q96M32 723 aa25.28■■□□□ 1.64
TRIM4-202ENST00000354241 FAM177BA6PVY3 158 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 SASH1O94885 1247 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 PARP10Q53GL7 1025 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 SUSD4Q5VX71 490 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 CLASRPQ8N2M8 674 aaKnown RBP25.27■■□□□ 1.64
TRIM4-202ENST00000354241 IRS4O14654 1257 aaPredicted RBP25.27■■□□□ 1.64
TRIM4-202ENST00000354241 TSHZ3Q63HK5 1081 aa25.27■■□□□ 1.64
TRIM4-202ENST00000354241 SLC27A3Q5K4L6 730 aa25.26■■□□□ 1.63
TRIM4-202ENST00000354241 CLEC4GQ6UXB4 293 aa25.26■■□□□ 1.63
TRIM4-202ENST00000354241 SEC24BO95487 1268 aa25.25■■□□□ 1.63
TRIM4-202ENST00000354241 UTP14AQ9BVJ6 771 aaKnown RBP25.25■■□□□ 1.63
TRIM4-202ENST00000354241 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
TRIM4-202ENST00000354241 STAP2Q9UGK3 403 aa25.25■■□□□ 1.63
TRIM4-202ENST00000354241 NARFQ9UHQ1 456 aa25.25■■□□□ 1.63
TRIM4-202ENST00000354241 PHF14O94880 888 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 USPL1Q5W0Q7 1092 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 AMIGO3Q86WK7 504 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 SRP68Q9UHB9 627 aaKnown RBP25.24■■□□□ 1.63
TRIM4-202ENST00000354241 EP400Q96L91 3159 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 C4AP0C0L4 1744 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 ZPR1O75312 459 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 CCDC57Q2TAC2 916 aa25.24■■□□□ 1.63
TRIM4-202ENST00000354241 SH3TC1Q8TE82 1336 aa25.23■■□□□ 1.63
TRIM4-202ENST00000354241 CSF1RP07333 972 aa25.23■■□□□ 1.63
TRIM4-202ENST00000354241 CTSWP56202 376 aa25.23■■□□□ 1.63
TRIM4-202ENST00000354241 ARHGEF1Q92888 912 aaKnown RBP25.23■■□□□ 1.63
TRIM4-202ENST00000354241 TUBGCP6Q96RT7 1819 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 PDE8AO60658 829 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 IFIT2P09913 472 aaKnown RBP25.22■■□□□ 1.63
TRIM4-202ENST00000354241 AACSQ86V21 672 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 ZNF594Q96JF6 807 aaPredicted RBP25.22■■□□□ 1.63
TRIM4-202ENST00000354241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.22■■□□□ 1.63
TRIM4-202ENST00000354241 AOX1Q06278 1338 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 RGL2O15211 777 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
TRIM4-202ENST00000354241 UBR3Q6ZT12 1888 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 NTSR2O95665 410 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 SDSP20132 328 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
TRIM4-202ENST00000354241 DDX60Q8IY21 1712 aaKnown RBP25.2■■□□□ 1.63
TRIM4-202ENST00000354241 CDC45O75419 566 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 APBA3O96018 575 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 TFCP2Q12800 502 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 TXNRD1Q16881 649 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 BICDL1Q6ZP65 573 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 TTLL11Q8NHH1 800 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 RFC4P35249 363 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 IFIT5Q13325 482 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms