RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 PDRG1Q9NUG6 133 aa21.85■■□□□ 1.09
APP-203ENST00000354192 RBM8AQ9Y5S9 174 aaKnown RBP21.85■■□□□ 1.09
APP-203ENST00000354192 ZSCAN23Q3MJ62 389 aa21.84■■□□□ 1.09
APP-203ENST00000354192 ZNF335Q9H4Z2 1342 aaPredicted RBP21.84■■□□□ 1.09
APP-203ENST00000354192 MEGF6O75095 1541 aa21.84■■□□□ 1.09
APP-203ENST00000354192 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
APP-203ENST00000354192 TAF6LQ9Y6J9 622 aa21.83■■□□□ 1.09
APP-203ENST00000354192 GPTP24298 496 aa21.83■■□□□ 1.09
APP-203ENST00000354192 PRIM1P49642 420 aaKnown RBP21.83■■□□□ 1.09
APP-203ENST00000354192 SNRKQ9NRH2 765 aa21.83■■□□□ 1.09
APP-203ENST00000354192 GADD45BO75293 160 aaPredicted RBP21.83■■□□□ 1.08
APP-203ENST00000354192 MCM2P49736 904 aa21.82■■□□□ 1.08
APP-203ENST00000354192 EVI5LQ96CN4 794 aa21.82■■□□□ 1.08
APP-203ENST00000354192 RUFY3Q7L099 469 aa21.81■■□□□ 1.08
APP-203ENST00000354192 CYP46A1Q9Y6A2 500 aa21.81■■□□□ 1.08
APP-203ENST00000354192 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
APP-203ENST00000354192 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
APP-203ENST00000354192 FAM173BQ6P4H8 233 aa21.81■■□□□ 1.08
APP-203ENST00000354192 NAP1L5Q96NT1 182 aaPredicted RBP21.81■■□□□ 1.08
APP-203ENST00000354192 TMEM63CQ9P1W3 806 aa21.81■■□□□ 1.08
APP-203ENST00000354192 ANAPC15P60006 121 aa21.8■■□□□ 1.08
APP-203ENST00000354192 GORABQ5T7V8 394 aa21.8■■□□□ 1.08
APP-203ENST00000354192 SLAIN2Q9P270 581 aa21.8■■□□□ 1.08
APP-203ENST00000354192 CNPY2Q9Y2B0 182 aa21.8■■□□□ 1.08
APP-203ENST00000354192 TTC41PQ6P2S7 1318 aa21.8■■□□□ 1.08
APP-203ENST00000354192 HSP90B1P14625 803 aaKnown RBP21.8■■□□□ 1.08
APP-203ENST00000354192 DBNLQ9UJU6 430 aaKnown RBP21.8■■□□□ 1.08
APP-203ENST00000354192 NBPF26B4DH59 902 aa21.79■■□□□ 1.08
APP-203ENST00000354192 HSP90AB3PQ58FF7 597 aa21.79■■□□□ 1.08
APP-203ENST00000354192 TAF7LQ5H9L4 462 aa21.79■■□□□ 1.08
APP-203ENST00000354192 NBPF14Q5TI25 921 aa21.79■■□□□ 1.08
APP-203ENST00000354192 NBPF10Q6P3W6 841 aaKnown RBP21.79■■□□□ 1.08
APP-203ENST00000354192 NBPF15Q8N660 670 aa21.79■■□□□ 1.08
APP-203ENST00000354192 LIMCH1Q9UPQ0 1083 aa21.79■■□□□ 1.08
APP-203ENST00000354192 SPATA31A3Q5VYP0 1347 aa21.79■■□□□ 1.08
APP-203ENST00000354192 GOLIM4O00461 696 aa21.79■■□□□ 1.08
APP-203ENST00000354192 PTMSP20962 102 aa21.78■■□□□ 1.08
APP-203ENST00000354192 FKBP4Q02790 459 aaKnown RBP eCLIP21.78■■□□□ 1.08
APP-203ENST00000354192 FAM208AQ9UK61 1670 aaKnown RBP21.78■■□□□ 1.08
APP-203ENST00000354192 CYP2E1P05181 493 aaPredicted RBP21.77■■□□□ 1.08
APP-203ENST00000354192 GJB2P29033 226 aa21.77■■□□□ 1.08
APP-203ENST00000354192 CREB3L3Q68CJ9 461 aa21.77■■□□□ 1.08
APP-203ENST00000354192 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.08
APP-203ENST00000354192 SYNE4Q8N205 404 aa21.77■■□□□ 1.08
APP-203ENST00000354192 FAM89AQ96GI7 184 aa21.77■■□□□ 1.08
APP-203ENST00000354192 CCDC171Q6TFL3 1326 aa21.77■■□□□ 1.08
APP-203ENST00000354192 USP48Q86UV5 1035 aa21.77■■□□□ 1.07
APP-203ENST00000354192 FAM43AQ8N2R8 423 aa21.77■■□□□ 1.07
APP-203ENST00000354192 PTPN12Q05209 780 aaKnown RBP21.76■■□□□ 1.07
APP-203ENST00000354192 MTX1Q13505 466 aa21.76■■□□□ 1.07
APP-203ENST00000354192 RBSNQ9H1K0 784 aa21.76■■□□□ 1.07
APP-203ENST00000354192 AOX1Q06278 1338 aa21.76■■□□□ 1.07
APP-203ENST00000354192 LRRC24Q50LG9 513 aa21.76■■□□□ 1.07
APP-203ENST00000354192 DDX11Q96FC9 970 aa21.76■■□□□ 1.07
APP-203ENST00000354192 BRD1O95696 1058 aa21.75■■□□□ 1.07
APP-203ENST00000354192 SYT1P21579 422 aa21.75■■□□□ 1.07
APP-203ENST00000354192 TNNI3KQ59H18 835 aa21.75■■□□□ 1.07
APP-203ENST00000354192 PUS3Q9BZE2 481 aaKnown RBP21.75■■□□□ 1.07
APP-203ENST00000354192 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
APP-203ENST00000354192 FPGT-TNNI3KV9GXZ4 949 aa21.75■■□□□ 1.07
APP-203ENST00000354192 IL2RBP14784 551 aa21.75■■□□□ 1.07
APP-203ENST00000354192 CHST3Q7LGC8 479 aa21.75■■□□□ 1.07
APP-203ENST00000354192 MST1RQ04912 1400 aa21.75■■□□□ 1.07
APP-203ENST00000354192 BLOC1S2Q6QNY1 142 aa21.74■■□□□ 1.07
APP-203ENST00000354192 TMOD3Q9NYL9 352 aa21.74■■□□□ 1.07
APP-203ENST00000354192 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
APP-203ENST00000354192 STX6O43752 255 aa21.74■■□□□ 1.07
APP-203ENST00000354192 BTG4Q9NY30 223 aa21.74■■□□□ 1.07
APP-203ENST00000354192 KDM4AO75164 1064 aa21.73■■□□□ 1.07
APP-203ENST00000354192 WDR33Q9C0J8 1336 aaKnown RBP21.73■■□□□ 1.07
APP-203ENST00000354192 ME3Q16798 604 aa21.73■■□□□ 1.07
APP-203ENST00000354192 CWC25Q9NXE8 425 aaPredicted RBP21.73■■□□□ 1.07
APP-203ENST00000354192 CEBPZQ03701 1054 aaKnown RBP21.73■■□□□ 1.07
APP-203ENST00000354192 CUL4AQ13619 759 aa21.73■■□□□ 1.07
APP-203ENST00000354192 DNAJC10Q8IXB1 793 aa21.73■■□□□ 1.07
APP-203ENST00000354192 PXDNLA1KZ92 1463 aa21.72■■□□□ 1.07
APP-203ENST00000354192 SLC27A2O14975 620 aa21.72■■□□□ 1.07
APP-203ENST00000354192 ADAMTS2O95450 1211 aa21.72■■□□□ 1.07
APP-203ENST00000354192 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.72■■□□□ 1.07
APP-203ENST00000354192 DNM1Q05193 864 aaKnown RBP21.72■■□□□ 1.07
APP-203ENST00000354192 PLBD2Q8NHP8 589 aa21.72■■□□□ 1.07
APP-203ENST00000354192 TFIP11Q9UBB9 837 aaKnown RBP21.71■■□□□ 1.07
APP-203ENST00000354192 LARP1BQ659C4 914 aaKnown RBP21.71■■□□□ 1.07
APP-203ENST00000354192 TPCN1Q9ULQ1 816 aa21.71■■□□□ 1.07
APP-203ENST00000354192 PTMAP06454 111 aaKnown RBP21.71■■□□□ 1.07
APP-203ENST00000354192 WASHC4Q2M389 1173 aa21.71■■□□□ 1.07
APP-203ENST00000354192 RAB11FIP4Q86YS3 637 aa21.71■■□□□ 1.07
APP-203ENST00000354192 NCAPD2Q15021 1401 aa21.7■■□□□ 1.06
APP-203ENST00000354192 RNF20Q5VTR2 975 aa21.7■■□□□ 1.06
APP-203ENST00000354192 LRRC37A3O60309 1634 aa21.69■■□□□ 1.06
APP-203ENST00000354192 ESPNB1AK53 854 aa21.69■■□□□ 1.06
APP-203ENST00000354192 ERBB4Q15303 1308 aa21.69■■□□□ 1.06
APP-203ENST00000354192 HAND2P61296 217 aa21.69■■□□□ 1.06
APP-203ENST00000354192 TBC1D2BQ9UPU7 963 aa21.69■■□□□ 1.06
APP-203ENST00000354192 TNS3Q68CZ2 1445 aa21.68■■□□□ 1.06
APP-203ENST00000354192 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
APP-203ENST00000354192 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
APP-203ENST00000354192 CCDC57Q2TAC2 916 aa21.68■■□□□ 1.06
APP-203ENST00000354192 INTS4Q96HW7 963 aaKnown RBP21.68■■□□□ 1.06
APP-203ENST00000354192 TTC14Q96N46 770 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms