RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 C9orf78Q9NZ63 289 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF25-203ENST00000351959 MSL1Q68DK7 614 aa25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 UTP14AQ9BVJ6 771 aaKnown RBP25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 USP44Q9H0E7 712 aa25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 CHMP4BQ9H444 224 aaKnown RBP25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 GRM8O00222 908 aa25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 ZBTB7BO15156 539 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 MTFR1LQ9H019 292 aa25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 TRMT112Q9UI30 125 aaKnown RBP25.29■■□□□ 1.64
TNFRSF25-203ENST00000351959 CARMIL3Q8ND23 1372 aa25.28■■□□□ 1.64
TNFRSF25-203ENST00000351959 H7C1W4 665 aa25.28■■□□□ 1.64
TNFRSF25-203ENST00000351959 TPTE2Q6XPS3 522 aa25.28■■□□□ 1.64
TNFRSF25-203ENST00000351959 ZBTB38Q8NAP3 1195 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF25-203ENST00000351959 NYXQ9GZU5 481 aa25.28■■□□□ 1.64
TNFRSF25-203ENST00000351959 FAM177BA6PVY3 158 aa25.27■■□□□ 1.64
TNFRSF25-203ENST00000351959 SERPINB2P05120 415 aa25.27■■□□□ 1.64
TNFRSF25-203ENST00000351959 PCCAP05165 728 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF25-203ENST00000351959 MMP10P09238 476 aa25.27■■□□□ 1.64
TNFRSF25-203ENST00000351959 NBPF5PQ86XG9 351 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF25-203ENST00000351959 CRBNQ96SW2 442 aa25.27■■□□□ 1.64
TNFRSF25-203ENST00000351959 UTYO14607 1347 aa25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 POLRMTO00411 1230 aaKnown RBP25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 ZBTB7AO95365 584 aa25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 NTSR2O95665 410 aa25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 GNAI3P08754 354 aa25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 DDR1Q08345 913 aa25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
TNFRSF25-203ENST00000351959 ANKRD36CQ5JPF3 1778 aa25.25■■□□□ 1.63
TNFRSF25-203ENST00000351959 IRX6P78412 446 aaPredicted RBP25.25■■□□□ 1.63
TNFRSF25-203ENST00000351959 HDAC5Q9UQL6 1122 aa25.25■■□□□ 1.63
TNFRSF25-203ENST00000351959 SH3TC1Q8TE82 1336 aa25.24■■□□□ 1.63
TNFRSF25-203ENST00000351959 NEFLP07196 543 aa25.24■■□□□ 1.63
TNFRSF25-203ENST00000351959 NBPF7P0C2Y1 421 aaPredicted RBP25.24■■□□□ 1.63
TNFRSF25-203ENST00000351959 GTF2E1P29083 439 aaPredicted RBP25.24■■□□□ 1.63
TNFRSF25-203ENST00000351959 FAM89AQ96GI7 184 aa25.24■■□□□ 1.63
TNFRSF25-203ENST00000351959 MEIS3Q99687 375 aa25.24■■□□□ 1.63
TNFRSF25-203ENST00000351959 CASZ1Q86V15 1759 aa25.23■■□□□ 1.63
TNFRSF25-203ENST00000351959 UBE3BQ7Z3V4 1068 aa25.23■■□□□ 1.63
TNFRSF25-203ENST00000351959 UBTFL1P0CB47 393 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF25-203ENST00000351959 CASP7P55210 303 aa25.22■■□□□ 1.63
TNFRSF25-203ENST00000351959 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF25-203ENST00000351959 JARID2Q92833 1246 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF25-203ENST00000351959 ATF5Q9Y2D1 282 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF25-203ENST00000351959 NPHP1O15259 732 aa25.21■■□□□ 1.63
TNFRSF25-203ENST00000351959 CNBD1Q8NA66 436 aa25.21■■□□□ 1.63
TNFRSF25-203ENST00000351959 ZBTB40Q9NUA8 1239 aa25.21■■□□□ 1.63
TNFRSF25-203ENST00000351959 N4BP2Q86UW6 1770 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF25-203ENST00000351959 CDHR2Q9BYE9 1310 aa25.21■■□□□ 1.63
TNFRSF25-203ENST00000351959 HSP90B1P14625 803 aaKnown RBP25.2■■□□□ 1.63
TNFRSF25-203ENST00000351959 NUTM1Q86Y26 1132 aa25.2■■□□□ 1.63
TNFRSF25-203ENST00000351959 IRS4O14654 1257 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 POLD1P28340 1107 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 AAMPQ13685 434 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 ERFEQ4G0M1 354 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 SLC10A5Q5PT55 438 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 PRR5LQ6MZQ0 368 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 SYNE4Q8N205 404 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 EXOC6Q8TAG9 804 aa25.2■■□□□ 1.62
TNFRSF25-203ENST00000351959 AFDNP55196 1824 aaKnown RBP25.19■■□□□ 1.62
TNFRSF25-203ENST00000351959 GNAI2P04899 355 aa25.18■■□□□ 1.62
TNFRSF25-203ENST00000351959 ST5P78524 1137 aa25.18■■□□□ 1.62
TNFRSF25-203ENST00000351959 COL24A1Q17RW2 1714 aa25.18■■□□□ 1.62
TNFRSF25-203ENST00000351959 SUCLG2Q96I99 432 aa25.17■■□□□ 1.62
TNFRSF25-203ENST00000351959 PLA2G12BQ9BX93 195 aa25.17■■□□□ 1.62
TNFRSF25-203ENST00000351959 PDE8AO60658 829 aa25.16■■□□□ 1.62
TNFRSF25-203ENST00000351959 SPON1Q9HCB6 807 aa25.16■■□□□ 1.62
TNFRSF25-203ENST00000351959 HCLS1P14317 486 aaPredicted RBP25.15■■□□□ 1.62
TNFRSF25-203ENST00000351959 SGIP1Q9BQI5 828 aa25.15■■□□□ 1.62
TNFRSF25-203ENST00000351959 LRRFIP2Q9Y608 721 aaKnown RBP25.15■■□□□ 1.62
TNFRSF25-203ENST00000351959 CCDC24Q8N4L8 307 aa25.14■■□□□ 1.62
TNFRSF25-203ENST00000351959 KAZALD1Q96I82 304 aa25.14■■□□□ 1.62
TNFRSF25-203ENST00000351959 NLRP3Q96P20 1036 aa25.13■■□□□ 1.61
TNFRSF25-203ENST00000351959 PTGER2P43116 358 aa25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 FOXO4P98177 505 aa25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 BRIP1Q9BX63 1249 aa25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 ABCC12Q96J65 1359 aa25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 EPHA10Q5JZY3 1008 aa25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 BICC1Q9H694 974 aaKnown RBP25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 C1orf115Q9H7X2 142 aa25.12■■□□□ 1.61
TNFRSF25-203ENST00000351959 RABL6Q3YEC7 729 aaPredicted RBP25.11■■□□□ 1.61
TNFRSF25-203ENST00000351959 RIC1Q4ADV7 1423 aa25.11■■□□□ 1.61
TNFRSF25-203ENST00000351959 NRXN2Q9P2S2 1712 aa25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 CSF1RP07333 972 aa25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 CTSWP56202 376 aa25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 SF3B3Q15393 1217 aaKnown RBP25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 RPAP2Q8IXW5 612 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 TTLL11Q8NHH1 800 aa25.1■■□□□ 1.61
TNFRSF25-203ENST00000351959 PDE6BP35913 854 aa25.09■■□□□ 1.61
TNFRSF25-203ENST00000351959 LMBR1LQ6UX01 489 aa25.09■■□□□ 1.61
TNFRSF25-203ENST00000351959 ANKRD44Q8N8A2 993 aa25.09■■□□□ 1.61
TNFRSF25-203ENST00000351959 KLRG2A4D1S0 409 aaPredicted RBP25.08■■□□□ 1.61
TNFRSF25-203ENST00000351959 ATP8B2P98198 1209 aa25.07■■□□□ 1.6
TNFRSF25-203ENST00000351959 MTX1Q13505 466 aa25.07■■□□□ 1.6
TNFRSF25-203ENST00000351959 CCDC152Q4G0S7 254 aa25.06■■□□□ 1.6
TNFRSF25-203ENST00000351959 CEP85Q6P2H3 762 aa25.06■■□□□ 1.6
TNFRSF25-203ENST00000351959 C3orf67Q6ZVT6 689 aa25.06■■□□□ 1.6
TNFRSF25-203ENST00000351959 PDZRN3Q9UPQ7 1066 aa25.05■■□□□ 1.6
TNFRSF25-203ENST00000351959 PCDHB15Q9Y5E8 787 aa25.05■■□□□ 1.6
TNFRSF25-203ENST00000351959 CRY2Q49AN0 593 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms