RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NWD2Q9ULI1 1742 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 SPATA31A6Q5VVP1 1343 aa8.48□□□□□ -1.05
TRIM55-203ENST00000350034 GLRX3O76003 335 aaKnown RBP8.47□□□□□ -1.05
TRIM55-203ENST00000350034 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
TRIM55-203ENST00000350034 G3BP1Q13283 466 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRIM55-203ENST00000350034 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-203ENST00000350034 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
TRIM55-203ENST00000350034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-203ENST00000350034 DDIT3P35638 169 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
TRIM55-203ENST00000350034 OS9Q13438 667 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-203ENST00000350034 RABEP1Q15276 862 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 VPS72Q15906 364 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 DDB1Q16531 1140 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 JARID2Q92833 1246 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-203ENST00000350034 EAF2Q96CJ1 260 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-203ENST00000350034 PLA2G12BQ9BX93 195 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 MAP3K15Q6ZN16 1313 aa8.46□□□□□ -1.06
TRIM55-203ENST00000350034 ITGB4P16144 1822 aa8.45□□□□□ -1.06
TRIM55-203ENST00000350034 PCCAP05165 728 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-203ENST00000350034 IFIT2P09913 472 aaKnown RBP8.45□□□□□ -1.06
TRIM55-203ENST00000350034 LMBR1LQ6UX01 489 aa8.45□□□□□ -1.06
TRIM55-203ENST00000350034 GIGYF2Q6Y7W6 1299 aaKnown RBP8.45□□□□□ -1.06
TRIM55-203ENST00000350034 AACSQ86V21 672 aa8.45□□□□□ -1.06
TRIM55-203ENST00000350034 HSCBQ8IWL3 235 aa8.45□□□□□ -1.06
TRIM55-203ENST00000350034 FNBP4Q8N3X1 1017 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-203ENST00000350034 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
TRIM55-203ENST00000350034 TJP1Q07157 1748 aa8.45□□□□□ -1.06
TRIM55-203ENST00000350034 CICQ96RK0 1608 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-203ENST00000350034 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 ERVV-1B6SEH8 477 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 SGSM2O43147 1006 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 CD2BP2O95400 341 aaKnown RBP8.44□□□□□ -1.06
TRIM55-203ENST00000350034 IL6STP40189 918 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-203ENST00000350034 RBM6P78332 1123 aaKnown RBP8.44□□□□□ -1.06
TRIM55-203ENST00000350034 KIF6Q6ZMV9 814 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 CNTROBQ8N137 903 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 KLHDC4Q8TBB5 520 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 RILPL2Q969X0 211 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 GPATCH3Q96I76 525 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 GPR108Q9NPR9 543 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 CDHR2Q9BYE9 1310 aa8.44□□□□□ -1.06
TRIM55-203ENST00000350034 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-203ENST00000350034 CIAO1O76071 339 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 CSF1RP07333 972 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 EIF5P55010 431 aaKnown RBP8.43□□□□□ -1.06
TRIM55-203ENST00000350034 ANAPC15P60006 121 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 NBR1Q14596 966 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 NFKBIBQ15653 356 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 HSP90AB3PQ58FF7 597 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
TRIM55-203ENST00000350034 ATG9AQ7Z3C6 839 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 ZBTB38Q8NAP3 1195 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-203ENST00000350034 IL27Q8NEV9 243 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 EVI5LQ96CN4 794 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 IL25Q9H293 177 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 SNRKQ9NRH2 765 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 FBXO3Q9UK99 471 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 DOT1LQ8TEK3 1739 aa8.43□□□□□ -1.06
TRIM55-203ENST00000350034 DCAF8L1A6NGE4 600 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 EYA2O00167 538 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 ATP5JP18859 108 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 HSPA4P34932 840 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 TFCP2Q12800 502 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 HLFQ16534 295 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 NLRP10Q86W26 655 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 ZNF34Q8IZ26 560 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 SMARCC1Q92922 1105 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 CCDC8Q9H0W5 538 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 SIL1Q9H173 461 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 RNF39Q9H2S5 420 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 CHMP5Q9NZZ3 219 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 DBNLQ9UJU6 430 aaKnown RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 RREB1Q92766 1687 aa8.42□□□□□ -1.06
TRIM55-203ENST00000350034 AFDNP55196 1824 aaKnown RBP8.42□□□□□ -1.06
TRIM55-203ENST00000350034 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.41□□□□□ -1.06
TRIM55-203ENST00000350034 RAD50Q92878 1312 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 LOC102724428A0A0B4J2F2 783 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 MAP4K4O95819 1239 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-203ENST00000350034 IL15P40933 162 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-203ENST00000350034 SIK1P57059 783 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 MYT1Q01538 1121 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 ITPK1Q13572 414 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 KCNB2Q92953 911 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-203ENST00000350034 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-203ENST00000350034 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
TRIM55-203ENST00000350034 RFX7Q2KHR2 1363 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 PALLDQ8WX93 1383 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 AFF2P51816 1311 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-203ENST00000350034 HIP1O00291 1037 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms