RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 UBN2Q6ZU65 1347 aa34.04■■■■□ 3.04
SSBP4-202ENST00000348495 GPTP24298 496 aa34.04■■■■□ 3.04
SSBP4-202ENST00000348495 STK32BQ9NY57 414 aa34.04■■■■□ 3.04
SSBP4-202ENST00000348495 PNPLA7Q6ZV29 1317 aa34.03■■■■□ 3.04
SSBP4-202ENST00000348495 COL23A1Q86Y22 540 aaPredicted RBP34.03■■■■□ 3.04
SSBP4-202ENST00000348495 PCDHB15Q9Y5E8 787 aa34.03■■■■□ 3.04
SSBP4-202ENST00000348495 UBTFL1P0CB47 393 aaPredicted RBP34.02■■■■□ 3.04
SSBP4-202ENST00000348495 H7C1W4 665 aa34.01■■■■□ 3.04
SSBP4-202ENST00000348495 C1orf115Q9H7X2 142 aa34.01■■■■□ 3.04
SSBP4-202ENST00000348495 CASP7P55210 303 aa34.01■■■■□ 3.03
SSBP4-202ENST00000348495 GNAI2P04899 355 aa34■■■■□ 3.03
SSBP4-202ENST00000348495 GYS1P13807 737 aa33.99■■■■□ 3.03
SSBP4-202ENST00000348495 NIP7Q9Y221 180 aaKnown RBP eCLIP33.99■■■■□ 3.03
SSBP4-202ENST00000348495 PARP10Q53GL7 1025 aa33.99■■■■□ 3.03
SSBP4-202ENST00000348495 TBC1D9BQ66K14 1250 aa33.99■■■■□ 3.03
SSBP4-202ENST00000348495 UBE3BQ7Z3V4 1068 aa33.97■■■■□ 3.03
SSBP4-202ENST00000348495 LRRFIP2Q9Y608 721 aaKnown RBP33.97■■■■□ 3.03
SSBP4-202ENST00000348495 COL24A1Q17RW2 1714 aa33.96■■■■□ 3.03
SSBP4-202ENST00000348495 ZBTB38Q8NAP3 1195 aaPredicted RBP33.96■■■■□ 3.03
SSBP4-202ENST00000348495 PCCAP05165 728 aaPredicted RBP33.96■■■■□ 3.03
SSBP4-202ENST00000348495 SUSD4Q5VX71 490 aa33.96■■■■□ 3.03
SSBP4-202ENST00000348495 KAZALD1Q96I82 304 aa33.95■■■■□ 3.03
SSBP4-202ENST00000348495 HDAC5Q9UQL6 1122 aa33.95■■■■□ 3.03
SSBP4-202ENST00000348495 JARID2Q92833 1246 aaPredicted RBP33.94■■■■□ 3.02
SSBP4-202ENST00000348495 SUCLG2Q96I99 432 aa33.94■■■■□ 3.02
SSBP4-202ENST00000348495 CEP85Q6P2H3 762 aa33.93■■■■□ 3.02
SSBP4-202ENST00000348495 SIRT2Q8IXJ6 389 aa33.92■■■■□ 3.02
SSBP4-202ENST00000348495 CCDC136Q96JN2 1154 aa33.92■■■■□ 3.02
SSBP4-202ENST00000348495 SETDB2Q96T68 719 aa33.92■■■■□ 3.02
SSBP4-202ENST00000348495 NTSR2O95665 410 aa33.91■■■■□ 3.02
SSBP4-202ENST00000348495 NFIXQ14938 502 aa33.91■■■■□ 3.02
SSBP4-202ENST00000348495 B4GALNT3Q6L9W6 998 aa33.91■■■■□ 3.02
SSBP4-202ENST00000348495 BICDL1Q6ZP65 573 aa33.91■■■■□ 3.02
SSBP4-202ENST00000348495 RPAP2Q8IXW5 612 aaPredicted RBP33.91■■■■□ 3.02
SSBP4-202ENST00000348495 FAM89AQ96GI7 184 aa33.91■■■■□ 3.02
SSBP4-202ENST00000348495 UTP14AQ9BVJ6 771 aaKnown RBP33.91■■■■□ 3.02
SSBP4-202ENST00000348495 TRMT112Q9UI30 125 aaKnown RBP33.91■■■■□ 3.02
SSBP4-202ENST00000348495 CDHR2Q9BYE9 1310 aa33.9■■■■□ 3.02
SSBP4-202ENST00000348495 ANKRD44Q8N8A2 993 aa33.9■■■■□ 3.02
SSBP4-202ENST00000348495 PPP1R42Q7Z4L9 355 aa33.9■■■■□ 3.02
SSBP4-202ENST00000348495 MSH5O43196 834 aa33.89■■■■□ 3.02
SSBP4-202ENST00000348495 RTL5Q5HYW3 569 aaPredicted RBP33.89■■■■□ 3.02
SSBP4-202ENST00000348495 TM4SF1P30408 202 aa33.88■■■■□ 3.01
SSBP4-202ENST00000348495 HDAC1Q13547 482 aaPredicted RBP33.88■■■■□ 3.01
SSBP4-202ENST00000348495 EPHA10Q5JZY3 1008 aa33.87■■■■□ 3.01
SSBP4-202ENST00000348495 SYNE4Q8N205 404 aa33.87■■■■□ 3.01
SSBP4-202ENST00000348495 CARMIL3Q8ND23 1372 aa33.87■■■■□ 3.01
SSBP4-202ENST00000348495 NLGN1Q8N2Q7 840 aa33.87■■■■□ 3.01
SSBP4-202ENST00000348495 PLA2G12BQ9BX93 195 aa33.87■■■■□ 3.01
SSBP4-202ENST00000348495 BICC1Q9H694 974 aaKnown RBP33.87■■■■□ 3.01
SSBP4-202ENST00000348495 SH3TC1Q8TE82 1336 aa33.86■■■■□ 3.01
SSBP4-202ENST00000348495 IGHDP01880 384 aa33.86■■■■□ 3.01
SSBP4-202ENST00000348495 MTX1Q13505 466 aa33.86■■■■□ 3.01
SSBP4-202ENST00000348495 ATP8B2P98198 1209 aa33.85■■■■□ 3.01
SSBP4-202ENST00000348495 FAM177BA6PVY3 158 aa33.84■■■■□ 3.01
SSBP4-202ENST00000348495 FOXO4P98177 505 aa33.84■■■■□ 3.01
SSBP4-202ENST00000348495 RABL6Q3YEC7 729 aaPredicted RBP33.84■■■■□ 3.01
SSBP4-202ENST00000348495 NYXQ9GZU5 481 aa33.83■■■■□ 3.01
SSBP4-202ENST00000348495 RWDD1Q9H446 243 aaPredicted RBP33.83■■■■□ 3.01
SSBP4-202ENST00000348495 KDM2BQ8NHM5 1336 aa33.83■■■■□ 3.01
SSBP4-202ENST00000348495 IRS4O14654 1257 aaPredicted RBP33.82■■■■□ 3
SSBP4-202ENST00000348495 PNMA6EA0A0J9YXQ4 647 aa33.82■■■■□ 3
SSBP4-202ENST00000348495 NBPF5PQ86XG9 351 aaPredicted RBP33.82■■■■□ 3
SSBP4-202ENST00000348495 PDGFDQ9GZP0 370 aaPredicted RBP33.82■■■■□ 3
SSBP4-202ENST00000348495 LAMB2P55268 1798 aa33.81■■■■□ 3
SSBP4-202ENST00000348495 DDR1Q08345 913 aa33.81■■■■□ 3
SSBP4-202ENST00000348495 NUTM1Q86Y26 1132 aa33.81■■■■□ 3
SSBP4-202ENST00000348495 DDX60Q8IY21 1712 aaKnown RBP33.81■■■■□ 3
SSBP4-202ENST00000348495 SSH3Q8TE77 659 aa33.8■■■■□ 3
SSBP4-202ENST00000348495 POLA2Q14181 598 aa33.79■■■■□ 3
SSBP4-202ENST00000348495 TPTE2Q6XPS3 522 aa33.79■■■■□ 3
SSBP4-202ENST00000348495 POLRMTO00411 1230 aaKnown RBP33.79■■■■□ 3
SSBP4-202ENST00000348495 ERFEQ4G0M1 354 aa33.79■■■■□ 3
SSBP4-202ENST00000348495 SLC10A5Q5PT55 438 aa33.78■■■■□ 3
SSBP4-202ENST00000348495 SRGAP3O43295 1099 aa33.77■■■■□ 3
SSBP4-202ENST00000348495 HMMRO75330 724 aa33.77■■■■□ 3
SSBP4-202ENST00000348495 PDE8AO60658 829 aa33.76■■■■□ 3
SSBP4-202ENST00000348495 LMBR1LQ6UX01 489 aa33.76■■■■□ 3
SSBP4-202ENST00000348495 ABCC12Q96J65 1359 aa33.76■■■■□ 3
SSBP4-202ENST00000348495 MYH3P11055 1940 aa33.76■■■□□ 2.99
SSBP4-202ENST00000348495 SERPINB2P05120 415 aa33.76■■■□□ 2.99
SSBP4-202ENST00000348495 CSF1RP07333 972 aa33.76■■■□□ 2.99
SSBP4-202ENST00000348495 HCLS1P14317 486 aaPredicted RBP33.76■■■□□ 2.99
SSBP4-202ENST00000348495 SLC16A10Q8TF71 515 aa33.76■■■□□ 2.99
SSBP4-202ENST00000348495 CASZ1Q86V15 1759 aa33.75■■■□□ 2.99
SSBP4-202ENST00000348495 HSP90B1P14625 803 aaKnown RBP33.75■■■□□ 2.99
SSBP4-202ENST00000348495 MSL1Q68DK7 614 aa33.75■■■□□ 2.99
SSBP4-202ENST00000348495 CENPQQ7L2Z9 268 aaPredicted RBP33.75■■■□□ 2.99
SSBP4-202ENST00000348495 NRXN2Q9P2S2 1712 aa33.75■■■□□ 2.99
SSBP4-202ENST00000348495 CTSWP56202 376 aa33.74■■■□□ 2.99
SSBP4-202ENST00000348495 MMP10P09238 476 aa33.73■■■□□ 2.99
SSBP4-202ENST00000348495 PRR5LQ6MZQ0 368 aa33.73■■■□□ 2.99
SSBP4-202ENST00000348495 CNBD1Q8NA66 436 aa33.73■■■□□ 2.99
SSBP4-202ENST00000348495 GTF2E1P29083 439 aaPredicted RBP33.73■■■□□ 2.99
SSBP4-202ENST00000348495 TTLL11Q8NHH1 800 aa33.73■■■□□ 2.99
SSBP4-202ENST00000348495 SMC5Q8IY18 1101 aa33.72■■■□□ 2.99
SSBP4-202ENST00000348495 DCTPP1Q9H773 170 aa33.72■■■□□ 2.99
SSBP4-202ENST00000348495 RIC1Q4ADV7 1423 aa33.71■■■□□ 2.99
SSBP4-202ENST00000348495 R3HDM1Q15032 1099 aaKnown RBP33.7■■■□□ 2.99
SSBP4-202ENST00000348495 RFX5P48382 616 aaPredicted RBP33.7■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms