RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PAPPAQ13219 1627 aa25.79■■□□□ 1.72
PTPN18-202ENST00000347849 A0A087WZG4 1122 aa25.78■■□□□ 1.72
PTPN18-202ENST00000347849 CLASRPQ8N2M8 674 aaKnown RBP25.78■■□□□ 1.72
PTPN18-202ENST00000347849 KIAA1211Q6ZU35 1233 aa25.78■■□□□ 1.72
PTPN18-202ENST00000347849 ZGPATQ8N5A5 531 aaKnown RBP25.78■■□□□ 1.72
PTPN18-202ENST00000347849 ARFGEF2Q9Y6D5 1785 aa25.78■■□□□ 1.72
PTPN18-202ENST00000347849 DISP2A7MBM2 1401 aa25.77■■□□□ 1.72
PTPN18-202ENST00000347849 MSNP26038 577 aaKnown RBP25.77■■□□□ 1.72
PTPN18-202ENST00000347849 PRPF40AO75400 957 aaKnown RBP25.77■■□□□ 1.72
PTPN18-202ENST00000347849 CASP7P55210 303 aa25.77■■□□□ 1.72
PTPN18-202ENST00000347849 EAF2Q96CJ1 260 aaPredicted RBP25.77■■□□□ 1.72
PTPN18-202ENST00000347849 AHDC1Q5TGY3 1603 aaPredicted RBP25.77■■□□□ 1.72
PTPN18-202ENST00000347849 TPM2P07951 284 aa25.76■■□□□ 1.71
PTPN18-202ENST00000347849 VSIG10Q8N0Z9 540 aa25.76■■□□□ 1.71
PTPN18-202ENST00000347849 ATG3Q9NT62 314 aa25.76■■□□□ 1.71
PTPN18-202ENST00000347849 AACSQ86V21 672 aa25.76■■□□□ 1.71
PTPN18-202ENST00000347849 TLR7Q9NYK1 1049 aaKnown RBP25.76■■□□□ 1.71
PTPN18-202ENST00000347849 ST18O60284 1047 aa25.75■■□□□ 1.71
PTPN18-202ENST00000347849 DNAJC10Q8IXB1 793 aa25.75■■□□□ 1.71
PTPN18-202ENST00000347849 CWC22Q9HCG8 908 aaKnown RBP25.75■■□□□ 1.71
PTPN18-202ENST00000347849 COL14A1Q05707 1796 aaKnown RBP25.75■■□□□ 1.71
PTPN18-202ENST00000347849 G3BP1Q13283 466 aaKnown RBP eCLIP25.75■■□□□ 1.71
PTPN18-202ENST00000347849 CCDC8Q9H0W5 538 aaPredicted RBP25.75■■□□□ 1.71
PTPN18-202ENST00000347849 RBSNQ9H1K0 784 aa25.75■■□□□ 1.71
PTPN18-202ENST00000347849 USP42Q9H9J4 1324 aaKnown RBP25.75■■□□□ 1.71
PTPN18-202ENST00000347849 ANO2Q9NQ90 1003 aa25.74■■□□□ 1.71
PTPN18-202ENST00000347849 PALD1Q9ULE6 856 aa25.74■■□□□ 1.71
PTPN18-202ENST00000347849 ZNF330Q9Y3S2 320 aaPredicted RBP25.74■■□□□ 1.71
PTPN18-202ENST00000347849 RFX5P48382 616 aaPredicted RBP25.74■■□□□ 1.71
PTPN18-202ENST00000347849 ERC1Q8IUD2 1116 aa25.73■■□□□ 1.71
PTPN18-202ENST00000347849 IFIT2P09913 472 aaKnown RBP25.73■■□□□ 1.71
PTPN18-202ENST00000347849 PRIM1P49642 420 aaKnown RBP25.73■■□□□ 1.71
PTPN18-202ENST00000347849 RBM27Q9P2N5 1060 aaKnown RBP25.72■■□□□ 1.71
PTPN18-202ENST00000347849 PTPN12Q05209 780 aaKnown RBP25.72■■□□□ 1.71
PTPN18-202ENST00000347849 CHAMP1Q96JM3 812 aa25.72■■□□□ 1.71
PTPN18-202ENST00000347849 SLC4A9Q96Q91 983 aa25.72■■□□□ 1.71
PTPN18-202ENST00000347849 ECHDC1Q9NTX5 307 aa25.72■■□□□ 1.71
PTPN18-202ENST00000347849 AFDNP55196 1824 aaKnown RBP25.71■■□□□ 1.71
PTPN18-202ENST00000347849 TTC41PQ6P2S7 1318 aa25.71■■□□□ 1.71
PTPN18-202ENST00000347849 RABL6Q3YEC7 729 aaPredicted RBP25.71■■□□□ 1.71
PTPN18-202ENST00000347849 ZDHHC9Q9Y397 364 aa25.71■■□□□ 1.71
PTPN18-202ENST00000347849 COL22A1Q8NFW1 1626 aaPredicted RBP25.71■■□□□ 1.71
PTPN18-202ENST00000347849 OFD1O75665 1012 aa25.71■■□□□ 1.71
PTPN18-202ENST00000347849 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
PTPN18-202ENST00000347849 GPT2Q8TD30 523 aa25.71■■□□□ 1.71
PTPN18-202ENST00000347849 GLRX3O76003 335 aaKnown RBP25.7■■□□□ 1.7
PTPN18-202ENST00000347849 SYTL4Q96C24 671 aaPredicted RBP25.7■■□□□ 1.7
PTPN18-202ENST00000347849 NUTM2BA6NNL0 878 aaPredicted RBP25.7■■□□□ 1.7
PTPN18-202ENST00000347849 NUTM2EB1AL46 878 aaPredicted RBP25.7■■□□□ 1.7
PTPN18-202ENST00000347849 H7C1W4 665 aa25.7■■□□□ 1.7
PTPN18-202ENST00000347849 NUTM2AQ8IVF1 878 aaPredicted RBP25.7■■□□□ 1.7
PTPN18-202ENST00000347849 EXOC5O00471 708 aa25.69■■□□□ 1.7
PTPN18-202ENST00000347849 LMBR1LQ6UX01 489 aa25.69■■□□□ 1.7
PTPN18-202ENST00000347849 FOXO4P98177 505 aa25.69■■□□□ 1.7
PTPN18-202ENST00000347849 CNTROBQ8N137 903 aa25.69■■□□□ 1.7
PTPN18-202ENST00000347849 FOXD4L5Q5VV16 416 aaPredicted RBP25.68■■□□□ 1.7
PTPN18-202ENST00000347849 FOXD4L4Q8WXT5 416 aaPredicted RBP25.68■■□□□ 1.7
PTPN18-202ENST00000347849 COPRSQ9NQ92 184 aa25.68■■□□□ 1.7
PTPN18-202ENST00000347849 CWC25Q9NXE8 425 aaPredicted RBP25.68■■□□□ 1.7
PTPN18-202ENST00000347849 CWC27Q6UX04 472 aaKnown RBP25.66■■□□□ 1.7
PTPN18-202ENST00000347849 BCL9O00512 1426 aa25.66■■□□□ 1.7
PTPN18-202ENST00000347849 NUP188Q5SRE5 1749 aa25.66■■□□□ 1.7
PTPN18-202ENST00000347849 KAT6BQ8WYB5 2073 aa25.66■■□□□ 1.7
PTPN18-202ENST00000347849 SGSM2O43147 1006 aa25.65■■□□□ 1.7
PTPN18-202ENST00000347849 ITGB4P16144 1822 aa25.65■■□□□ 1.7
PTPN18-202ENST00000347849 TFCP2Q12800 502 aa25.65■■□□□ 1.7
PTPN18-202ENST00000347849 CHMP3Q9Y3E7 222 aa25.65■■□□□ 1.7
PTPN18-202ENST00000347849 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.64■■□□□ 1.7
PTPN18-202ENST00000347849 COL15A1P39059 1388 aa25.64■■□□□ 1.7
PTPN18-202ENST00000347849 HS1BP3Q53T59 392 aa25.64■■□□□ 1.69
PTPN18-202ENST00000347849 NOL7Q9UMY1 257 aaKnown RBP25.64■■□□□ 1.69
PTPN18-202ENST00000347849 NSFL1CQ9UNZ2 370 aaKnown RBP25.64■■□□□ 1.69
PTPN18-202ENST00000347849 PDLIM2Q96JY6 352 aa25.63■■□□□ 1.69
PTPN18-202ENST00000347849 ZMYND15Q9H091 742 aa25.63■■□□□ 1.69
PTPN18-202ENST00000347849 BOLA2Q9H3K6 86 aa25.63■■□□□ 1.69
PTPN18-202ENST00000347849 TMEM63CQ9P1W3 806 aa25.63■■□□□ 1.69
PTPN18-202ENST00000347849 SPATA31A1Q5TZJ5 1347 aa25.63■■□□□ 1.69
PTPN18-202ENST00000347849 SYCE3A1L190 88 aa25.62■■□□□ 1.69
PTPN18-202ENST00000347849 NEK4P51957 841 aa25.62■■□□□ 1.69
PTPN18-202ENST00000347849 CCDC191Q8NCU4 936 aa25.62■■□□□ 1.69
PTPN18-202ENST00000347849 GPATCH3Q96I76 525 aa25.62■■□□□ 1.69
PTPN18-202ENST00000347849 PHLPP1O60346 1717 aa25.62■■□□□ 1.69
PTPN18-202ENST00000347849 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.61■■□□□ 1.69
PTPN18-202ENST00000347849 R3HCC1Q9Y3T6 440 aaKnown RBP25.61■■□□□ 1.69
PTPN18-202ENST00000347849 TJP1Q07157 1748 aa25.61■■□□□ 1.69
PTPN18-202ENST00000347849 ISCA1Q9BUE6 129 aa25.61■■□□□ 1.69
PTPN18-202ENST00000347849 LSG1Q9H089 658 aaKnown RBP25.61■■□□□ 1.69
PTPN18-202ENST00000347849 PDCL3Q9H2J4 239 aa25.61■■□□□ 1.69
PTPN18-202ENST00000347849 DBNLQ9UJU6 430 aaKnown RBP25.61■■□□□ 1.69
PTPN18-202ENST00000347849 LRSAM1Q6UWE0 723 aa25.6■■□□□ 1.69
PTPN18-202ENST00000347849 EDC3Q96F86 508 aaKnown RBP25.6■■□□□ 1.69
PTPN18-202ENST00000347849 PLCH1Q4KWH8 1693 aa25.6■■□□□ 1.69
PTPN18-202ENST00000347849 STARD3NLO95772 234 aa25.6■■□□□ 1.69
PTPN18-202ENST00000347849 CYP19A1P11511 503 aaPredicted RBP25.6■■□□□ 1.69
PTPN18-202ENST00000347849 TCIRG1Q13488 830 aa25.6■■□□□ 1.69
PTPN18-202ENST00000347849 HLFQ16534 295 aa25.6■■□□□ 1.69
PTPN18-202ENST00000347849 ZNF594Q96JF6 807 aaPredicted RBP25.6■■□□□ 1.69
PTPN18-202ENST00000347849 NDUFB9Q9Y6M9 179 aa25.6■■□□□ 1.69
PTPN18-202ENST00000347849 TNNI3KQ59H18 835 aa25.59■■□□□ 1.69
PTPN18-202ENST00000347849 TMX3Q96JJ7 454 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms