RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 PDE6BP35913 854 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 TSNAXIP1Q2TAA8 658 aa6.58□□□□□ -1.36
VCAM1-202ENST00000347652 ZNF530Q6P9A1 599 aaPredicted RBP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 SALL2Q9Y467 1007 aaPredicted RBP6.58□□□□□ -1.36
VCAM1-202ENST00000347652 GOLGB1Q14789 3259 aaKnown RBP6.57□□□□□ -1.36
VCAM1-202ENST00000347652 ITGB4P16144 1822 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 DLG5Q8TDM6 1919 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 BAG6P46379 1132 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 LMOD3Q0VAK6 560 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 IFNL2Q8IZJ0 200 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 SPACA7Q96KW9 195 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 KDM6AO15550 1401 aaPredicted RBP6.57□□□□□ -1.36
VCAM1-202ENST00000347652 C1orf141Q5JVX7 400 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 MPRIPQ6WCQ1 1025 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 WDR63Q8IWG1 891 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 GNEQ9Y223 722 aaKnown RBP6.57□□□□□ -1.36
VCAM1-202ENST00000347652 SSUH2Q9Y2M2 353 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 RPS6KL1Q9Y6S9 549 aa6.57□□□□□ -1.36
VCAM1-202ENST00000347652 IL17REQ8NFR9 667 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 NLRP7Q8WX94 980 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 ADAMTS7Q9UKP4 1686 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 VIRMAQ69YN4 1812 aaKnown RBP6.56□□□□□ -1.36
VCAM1-202ENST00000347652 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 PSDA5PKW4 1024 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-202ENST00000347652 DCTN1Q14203 1278 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 MCM10Q7L590 875 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 PIGBQ92521 554 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 RTF1Q92541 710 aaKnown RBP6.56□□□□□ -1.36
VCAM1-202ENST00000347652 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
VCAM1-202ENST00000347652 LGR6Q9HBX8 967 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 LRRC4BQ9NT99 713 aa6.56□□□□□ -1.36
VCAM1-202ENST00000347652 IQSEC3Q9UPP2 1182 aaPredicted RBP6.56□□□□□ -1.36
VCAM1-202ENST00000347652 RREB1Q92766 1687 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 CEMIPQ8WUJ3 1361 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 RNMTO43148 476 aaKnown RBP6.55□□□□□ -1.36
VCAM1-202ENST00000347652 HSP90AB1P08238 724 aaKnown RBP6.55□□□□□ -1.36
VCAM1-202ENST00000347652 RFC5P40937 340 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 SERPINB4P48594 390 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 NPAS4Q8IUM7 802 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 FAM212AQ96EL1 285 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 UTRNP46939 3433 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 IL16Q14005 1332 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 CCDC194A0A1B0GVG4 234 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 RBM10P98175 930 aaKnown RBP6.55□□□□□ -1.36
VCAM1-202ENST00000347652 CAMK2BQ13554 666 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 DCAF5Q96JK2 942 aa6.55□□□□□ -1.36
VCAM1-202ENST00000347652 LMOD1P29536 600 aaPredicted RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 GOLGA2Q08379 1002 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 TXNRD1Q16881 649 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 EGFLAMQ63HQ2 1017 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 THUMPD2Q9BTF0 503 aaKnown RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 PPP1R12CQ9BZL4 782 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 PDGFDQ9GZP0 370 aaPredicted RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 ASAP1Q9ULH1 1129 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 G3BP2Q9UN86 482 aaKnown RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 FAN1Q9Y2M0 1017 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 PLSCR1O15162 318 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 CREB3O43889 395 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 ZNF853P0CG23 659 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 CALD1Q05682 793 aaKnown RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 MFSD10Q14728 455 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 TRMT2AQ8IZ69 625 aaKnown RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 MORC4Q8TE76 937 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 SECISBP2LQ93073 1101 aaKnown RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 SPOCK3Q9BQ16 436 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 SCN11AQ9UI33 1791 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 ANKRD33BA6NCL7 494 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 ERVV-2B6SEH9 535 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
VCAM1-202ENST00000347652 CCDC144BQ3MJ40 725 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 SMIM5Q71RC9 77 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 NFATC2IPQ8NCF5 419 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 FBXO22Q8NEZ5 403 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 CDCA7LQ96GN5 454 aa6.54□□□□□ -1.36
VCAM1-202ENST00000347652 LY75O60449 1722 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 MRC1P22897 1456 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 PALM3A6NDB9 673 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-202ENST00000347652 ERCC5P28715 1186 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-202ENST00000347652 TCEAL1Q15170 157 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 TAF7Q15545 349 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-202ENST00000347652 GRIPAP1Q4V328 841 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 UCN2Q96RP3 112 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 PHOX2BQ99453 314 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 CHPF2Q9P2E5 772 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 ABCB7O75027 752 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 CRISPLD2Q9H0B8 497 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 SLC52A2Q9HAB3 445 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 BABAM1Q9NWV8 329 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 TMOD3Q9NYL9 352 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 RGPD3A6NKT7 1758 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-202ENST00000347652 SIPA1L3O60292 1781 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-202ENST00000347652 RGPD4Q7Z3J3 1758 aa6.53□□□□□ -1.36
VCAM1-202ENST00000347652 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 CHL1O00533 1208 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 CHRM1P11229 460 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-202ENST00000347652 GNAI1P63096 354 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms