RNA–Protein interactions for RNA: ENST00000346855.7

UBE2E1-202, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3 BASIC

Gene UBE2E1, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-202ENST00000346855 POLRMTO00411 1230 aaKnown RBP23.16■■□□□ 1.3
UBE2E1-202ENST00000346855 ALDH1L1O75891 902 aa23.16■■□□□ 1.3
UBE2E1-202ENST00000346855 MMP10P09238 476 aa23.16■■□□□ 1.3
UBE2E1-202ENST00000346855 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
UBE2E1-202ENST00000346855 MYH3P11055 1940 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 PDE3AQ14432 1141 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 C20orf194Q5TEA3 1177 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 SUSD4Q5VX71 490 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 CWC25Q9NXE8 425 aaPredicted RBP23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 ANKRD31Q8N7Z5 1873 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 KIF13BQ9NQT8 1826 aa23.15■■□□□ 1.3
UBE2E1-202ENST00000346855 NTSR2O95665 410 aa23.14■■□□□ 1.3
UBE2E1-202ENST00000346855 ATF5Q9Y2D1 282 aaPredicted RBP23.14■■□□□ 1.3
UBE2E1-202ENST00000346855 GCKRQ14397 625 aa23.14■■□□□ 1.29
UBE2E1-202ENST00000346855 PPP1R42Q7Z4L9 355 aa23.14■■□□□ 1.29
UBE2E1-202ENST00000346855 SERPINB2P05120 415 aa23.13■■□□□ 1.29
UBE2E1-202ENST00000346855 SGIP1Q9BQI5 828 aa23.13■■□□□ 1.29
UBE2E1-202ENST00000346855 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
UBE2E1-202ENST00000346855 TNRC6CQ9HCJ0 1690 aaKnown RBP23.12■■□□□ 1.29
UBE2E1-202ENST00000346855 FAM177BA6PVY3 158 aa23.12■■□□□ 1.29
UBE2E1-202ENST00000346855 NBPF5PQ86XG9 351 aaPredicted RBP23.12■■□□□ 1.29
UBE2E1-202ENST00000346855 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
UBE2E1-202ENST00000346855 NYXQ9GZU5 481 aa23.12■■□□□ 1.29
UBE2E1-202ENST00000346855 PTGER2P43116 358 aa23.11■■□□□ 1.29
UBE2E1-202ENST00000346855 PCCAP05165 728 aaPredicted RBP23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 POLD1P28340 1107 aa23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 MVPQ14764 893 aaKnown RBP23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 CNBD1Q8NA66 436 aa23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 ZBTB38Q8NAP3 1195 aaPredicted RBP23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 ABCC12Q96J65 1359 aa23.1■■□□□ 1.29
UBE2E1-202ENST00000346855 SH3TC1Q8TE82 1336 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 GRM8O00222 908 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 PRR5LQ6MZQ0 368 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 TPTE2Q6XPS3 522 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 SPON1Q9HCB6 807 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 COG6Q9Y2V7 657 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 LRP5O75197 1615 aa23.09■■□□□ 1.29
UBE2E1-202ENST00000346855 UTYO14607 1347 aa23.08■■□□□ 1.29
UBE2E1-202ENST00000346855 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
UBE2E1-202ENST00000346855 H7C1W4 665 aa23.08■■□□□ 1.29
UBE2E1-202ENST00000346855 CASP7P55210 303 aa23.08■■□□□ 1.29
UBE2E1-202ENST00000346855 NUTM1Q86Y26 1132 aa23.08■■□□□ 1.29
UBE2E1-202ENST00000346855 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
UBE2E1-202ENST00000346855 FAM89AQ96GI7 184 aa23.07■■□□□ 1.28
UBE2E1-202ENST00000346855 USP44Q9H0E7 712 aa23.07■■□□□ 1.28
UBE2E1-202ENST00000346855 C9orf78Q9NZ63 289 aaPredicted RBP23.07■■□□□ 1.28
UBE2E1-202ENST00000346855 COL11A2P13942 1736 aaPredicted RBP23.07■■□□□ 1.28
UBE2E1-202ENST00000346855 KIAA1551Q9HCM1 1747 aa23.06■■□□□ 1.28
UBE2E1-202ENST00000346855 ERFEQ4G0M1 354 aa23.06■■□□□ 1.28
UBE2E1-202ENST00000346855 UBE3BQ7Z3V4 1068 aa23.06■■□□□ 1.28
UBE2E1-202ENST00000346855 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
UBE2E1-202ENST00000346855 MEIS3Q99687 375 aa23.06■■□□□ 1.28
UBE2E1-202ENST00000346855 DLEC1Q9Y238 1755 aa23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 NBPF7P0C2Y1 421 aaPredicted RBP23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 GTF2E1P29083 439 aaPredicted RBP23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 ST5P78524 1137 aa23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 RTL5Q5HYW3 569 aaPredicted RBP23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 JARID2Q92833 1246 aaPredicted RBP23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 DDX19BQ9UMR2 479 aa23.05■■□□□ 1.28
UBE2E1-202ENST00000346855 NPHP1O15259 732 aa23.04■■□□□ 1.28
UBE2E1-202ENST00000346855 CCDC24Q8N4L8 307 aa23.04■■□□□ 1.28
UBE2E1-202ENST00000346855 SLC10A5Q5PT55 438 aa23.03■■□□□ 1.28
UBE2E1-202ENST00000346855 IRS4O14654 1257 aaPredicted RBP23.02■■□□□ 1.28
UBE2E1-202ENST00000346855 ZBTB7BO15156 539 aaPredicted RBP23.02■■□□□ 1.28
UBE2E1-202ENST00000346855 CRBNQ96SW2 442 aa23.02■■□□□ 1.28
UBE2E1-202ENST00000346855 GNAI3P08754 354 aa23.01■■□□□ 1.27
UBE2E1-202ENST00000346855 UBTFL1P0CB47 393 aaPredicted RBP23.01■■□□□ 1.27
UBE2E1-202ENST00000346855 PLA2G12BQ9BX93 195 aa23.01■■□□□ 1.27
UBE2E1-202ENST00000346855 HCLS1P14317 486 aaPredicted RBP23.01■■□□□ 1.27
UBE2E1-202ENST00000346855 SUCLG2Q96I99 432 aa23.01■■□□□ 1.27
UBE2E1-202ENST00000346855 KAZALD1Q96I82 304 aa23■■□□□ 1.27
UBE2E1-202ENST00000346855 CACNA1SQ13698 1873 aa22.99■■□□□ 1.27
UBE2E1-202ENST00000346855 PDE8AO60658 829 aa22.99■■□□□ 1.27
UBE2E1-202ENST00000346855 HSP90B1P14625 803 aaKnown RBP22.99■■□□□ 1.27
UBE2E1-202ENST00000346855 BRIP1Q9BX63 1249 aa22.99■■□□□ 1.27
UBE2E1-202ENST00000346855 BRCA1P38398 1863 aaKnown RBP22.98■■□□□ 1.27
UBE2E1-202ENST00000346855 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
UBE2E1-202ENST00000346855 CHMP4BQ9H444 224 aaKnown RBP22.98■■□□□ 1.27
UBE2E1-202ENST00000346855 TAF1P21675 1872 aa22.97■■□□□ 1.27
UBE2E1-202ENST00000346855 EPHA10Q5JZY3 1008 aa22.97■■□□□ 1.27
UBE2E1-202ENST00000346855 C3orf67Q6ZVT6 689 aa22.97■■□□□ 1.27
UBE2E1-202ENST00000346855 ZBTB40Q9NUA8 1239 aa22.97■■□□□ 1.27
UBE2E1-202ENST00000346855 HDAC5Q9UQL6 1122 aa22.97■■□□□ 1.27
UBE2E1-202ENST00000346855 LRRFIP2Q9Y608 721 aaKnown RBP22.97■■□□□ 1.27
UBE2E1-202ENST00000346855 KLRG2A4D1S0 409 aaPredicted RBP22.96■■□□□ 1.27
UBE2E1-202ENST00000346855 CTSWP56202 376 aa22.96■■□□□ 1.27
UBE2E1-202ENST00000346855 FOXO4P98177 505 aa22.96■■□□□ 1.27
UBE2E1-202ENST00000346855 NLRP3Q96P20 1036 aa22.96■■□□□ 1.27
UBE2E1-202ENST00000346855 SPEF2Q9C093 1822 aa22.96■■□□□ 1.27
UBE2E1-202ENST00000346855 GNAI2P04899 355 aa22.95■■□□□ 1.26
UBE2E1-202ENST00000346855 BICC1Q9H694 974 aaKnown RBP22.95■■□□□ 1.26
UBE2E1-202ENST00000346855 PDE6BP35913 854 aa22.94■■□□□ 1.26
UBE2E1-202ENST00000346855 SF3B3Q15393 1217 aaKnown RBP22.94■■□□□ 1.26
UBE2E1-202ENST00000346855 RABL6Q3YEC7 729 aaPredicted RBP22.94■■□□□ 1.26
UBE2E1-202ENST00000346855 CRY2Q49AN0 593 aa22.94■■□□□ 1.26
UBE2E1-202ENST00000346855 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms