RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PLEKHM2Q8IWE5 1019 aa13.63□□□□□ -0.23
ECM1-201ENST00000346569 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
ECM1-201ENST00000346569 RGL2O15211 777 aa13.62□□□□□ -0.23
ECM1-201ENST00000346569 TRIM37O94972 964 aa13.62□□□□□ -0.23
ECM1-201ENST00000346569 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
ECM1-201ENST00000346569 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
ECM1-201ENST00000346569 C8orf34Q49A92 452 aa13.62□□□□□ -0.23
ECM1-201ENST00000346569 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
ECM1-201ENST00000346569 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
ECM1-201ENST00000346569 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
ECM1-201ENST00000346569 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
ECM1-201ENST00000346569 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
ECM1-201ENST00000346569 CLEC4GQ6UXB4 293 aa13.61□□□□□ -0.23
ECM1-201ENST00000346569 RBM19Q9Y4C8 960 aaKnown RBP13.61□□□□□ -0.23
ECM1-201ENST00000346569 SALL3Q9BXA9 1300 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 PROM2Q8N271 834 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 RHPN1Q8TCX5 695 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 OSBPL3Q9H4L5 887 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 PA2G4Q9UQ80 394 aaKnown RBP13.6□□□□□ -0.23
ECM1-201ENST00000346569 LY75O60449 1722 aa13.6□□□□□ -0.23
ECM1-201ENST00000346569 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
ECM1-201ENST00000346569 UBN2Q6ZU65 1347 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 APBB1O00213 710 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 PLSCR1O15162 318 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 CSF1RP07333 972 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 GPTP24298 496 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
ECM1-201ENST00000346569 SLC27A3Q5K4L6 730 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 OTUD7AQ8TE49 926 aaPredicted RBP13.59□□□□□ -0.23
ECM1-201ENST00000346569 KIF1BPQ96EK5 621 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
ECM1-201ENST00000346569 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
ECM1-201ENST00000346569 TNS1Q9HBL0 1735 aaKnown RBP13.59□□□□□ -0.23
ECM1-201ENST00000346569 NUP98P52948 1817 aa13.58□□□□□ -0.23
ECM1-201ENST00000346569 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
ECM1-201ENST00000346569 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
ECM1-201ENST00000346569 BCL2L12Q9HB09 334 aa13.58□□□□□ -0.24
ECM1-201ENST00000346569 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
ECM1-201ENST00000346569 SASH1O94885 1247 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 SUSD4Q5VX71 490 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 AMIGO3Q86WK7 504 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
ECM1-201ENST00000346569 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
ECM1-201ENST00000346569 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
ECM1-201ENST00000346569 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
ECM1-201ENST00000346569 GNPATO15228 680 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 PDE1AP54750 535 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
ECM1-201ENST00000346569 DEFB132Q7Z7B7 95 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
ECM1-201ENST00000346569 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 KLHDC4Q8TBB5 520 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 AK7Q96M32 723 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 ZNF652Q9Y2D9 606 aa13.56□□□□□ -0.24
ECM1-201ENST00000346569 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
ECM1-201ENST00000346569 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
ECM1-201ENST00000346569 TTLL11Q8NHH1 800 aa13.55□□□□□ -0.24
ECM1-201ENST00000346569 UTP14AQ9BVJ6 771 aaKnown RBP13.55□□□□□ -0.24
ECM1-201ENST00000346569 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
ECM1-201ENST00000346569 TAF1LQ8IZX4 1826 aa13.55□□□□□ -0.24
ECM1-201ENST00000346569 PDE8AO60658 829 aa13.54□□□□□ -0.24
ECM1-201ENST00000346569 NTSR2O95665 410 aa13.54□□□□□ -0.24
ECM1-201ENST00000346569 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
ECM1-201ENST00000346569 ADRA2BP18089 450 aa13.54□□□□□ -0.24
ECM1-201ENST00000346569 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
ECM1-201ENST00000346569 USPL1Q5W0Q7 1092 aa13.54□□□□□ -0.24
ECM1-201ENST00000346569 SRP68Q9UHB9 627 aaKnown RBP13.54□□□□□ -0.24
ECM1-201ENST00000346569 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
ECM1-201ENST00000346569 ANKRD36CQ5JPF3 1778 aa13.53□□□□□ -0.24
ECM1-201ENST00000346569 APBA3O96018 575 aa13.53□□□□□ -0.24
ECM1-201ENST00000346569 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
ECM1-201ENST00000346569 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
ECM1-201ENST00000346569 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
ECM1-201ENST00000346569 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
ECM1-201ENST00000346569 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
ECM1-201ENST00000346569 C4BP0C0L5 1744 aa13.52□□□□□ -0.24
ECM1-201ENST00000346569 ZPR1O75312 459 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 SEC24BO95487 1268 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 MX1P20591 662 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 CTSWP56202 376 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.25
ECM1-201ENST00000346569 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 CLASRPQ8N2M8 674 aaKnown RBP13.52□□□□□ -0.25
ECM1-201ENST00000346569 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
ECM1-201ENST00000346569 SIL1Q9H173 461 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 AOX1Q06278 1338 aa13.52□□□□□ -0.25
ECM1-201ENST00000346569 CIAO1O76071 339 aa13.51□□□□□ -0.25
ECM1-201ENST00000346569 SSFA2P28290 1259 aa13.51□□□□□ -0.25
ECM1-201ENST00000346569 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
ECM1-201ENST00000346569 SLC10A5Q5PT55 438 aa13.51□□□□□ -0.25
ECM1-201ENST00000346569 NUTM1Q86Y26 1132 aa13.51□□□□□ -0.25
ECM1-201ENST00000346569 BCL11AQ9H165 835 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms