RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ABCC2Q92887 1545 aa12.71□□□□□ -0.38
CLCN6-202ENST00000346436 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-202ENST00000346436 CWC25Q9NXE8 425 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-202ENST00000346436 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
CLCN6-202ENST00000346436 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-202ENST00000346436 TBX22Q9Y458 520 aa12.7□□□□□ -0.38
CLCN6-202ENST00000346436 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
CLCN6-202ENST00000346436 IMMTQ16891 758 aaKnown RBP12.7□□□□□ -0.38
CLCN6-202ENST00000346436 G2E3Q7L622 706 aa12.7□□□□□ -0.38
CLCN6-202ENST00000346436 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-202ENST00000346436 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
CLCN6-202ENST00000346436 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
CLCN6-202ENST00000346436 DCTPP1Q9H773 170 aa12.7□□□□□ -0.38
CLCN6-202ENST00000346436 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
CLCN6-202ENST00000346436 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 TNNT3P45378 269 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-202ENST00000346436 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
CLCN6-202ENST00000346436 MTHFSDQ2M296 383 aaKnown RBP12.69□□□□□ -0.38
CLCN6-202ENST00000346436 IQCA1Q86XH1 822 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 PI4KAP2A4QPH2 592 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 CA8P35219 290 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 KRT32Q14532 448 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 PI4KAP1Q8N8J0 262 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 ATP10AO60312 1499 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 KIF22Q14807 665 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 ZBTB3Q9H5J0 574 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 KINO60870 393 aaKnown RBP12.69□□□□□ -0.38
CLCN6-202ENST00000346436 DNAAF4Q8WXU2 420 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
CLCN6-202ENST00000346436 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
CLCN6-202ENST00000346436 INSRP06213 1382 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 SMC2O95347 1197 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 CLCN1P35523 988 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 NAPBQ9H115 298 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-202ENST00000346436 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
CLCN6-202ENST00000346436 MYO6Q9UM54 1294 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 GJA3Q9Y6H8 435 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 ATP7AQ04656 1500 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 ABCC1P33527 1531 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 GLRX3O76003 335 aaKnown RBP12.68□□□□□ -0.38
CLCN6-202ENST00000346436 ME1P48163 572 aa12.68□□□□□ -0.38
CLCN6-202ENST00000346436 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-202ENST00000346436 H0YIN7 160 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 RRP9O43818 475 aaKnown RBP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 PPP1R12BO60237 982 aaPredicted RBP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 USP26Q9BXU7 913 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 RAB34Q9BZG1 259 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 GJB2P29033 226 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 CNPY2Q9Y2B0 182 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 LUC7LQ9NQ29 371 aaKnown RBP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 PRDM10Q9NQV6 1147 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 ABCA8O94911 1581 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 TTC37Q6PGP7 1564 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 FILIP1LQ4L180 1135 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
CLCN6-202ENST00000346436 NIP7Q9Y221 180 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCN6-202ENST00000346436 GNPATO15228 680 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 UQCRFS1P1P0C7P4 283 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 CDR1P51861 262 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 LDHAL6AQ6ZMR3 332 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLCN6-202ENST00000346436 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-202ENST00000346436 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 PDE4BQ07343 736 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-202ENST00000346436 MAP3K2Q9Y2U5 619 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 CCDC150Q8NCX0 1101 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 GIMAP6Q6P9H5 292 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 FILIP1Q7Z7B0 1213 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 PDILTQ8N807 584 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 CHPF2Q9P2E5 772 aa12.66□□□□□ -0.38
CLCN6-202ENST00000346436 YTHDC2Q9H6S0 1430 aaKnown RBP12.65□□□□□ -0.38
CLCN6-202ENST00000346436 STX6O43752 255 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
CLCN6-202ENST00000346436 PLCG2P16885 1265 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 IL13P35225 146 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 STK38Q15208 465 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms