RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NRAPQ86VF7 1730 aa17.18■□□□□ 0.34
CDK5RAP1-202ENST00000346416 MCCP23508 829 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 SLC4A9Q96Q91 983 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 TJP1Q07157 1748 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 SGSM2O43147 1006 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 ST18O60284 1047 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 TCIRG1Q13488 830 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 DDB1Q16531 1140 aa17.17■□□□□ 0.34
CDK5RAP1-202ENST00000346416 ISCA1Q9BUE6 129 aa17.16■□□□□ 0.34
CDK5RAP1-202ENST00000346416 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
CDK5RAP1-202ENST00000346416 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
CDK5RAP1-202ENST00000346416 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 KIF6Q6ZMV9 814 aa17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 ANAPC15P60006 121 aa17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 TFCP2Q12800 502 aa17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
CDK5RAP1-202ENST00000346416 ARXQ96QS3 562 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 TRIM28Q13263 835 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 SPATA31A5Q5VU36 1347 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 SPATA31A7Q8IWB4 1347 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 DOT1LQ8TEK3 1739 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
CDK5RAP1-202ENST00000346416 MAP3K15Q6ZN16 1313 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 RAD50Q92878 1312 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 NEK4P51957 841 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 BOLA2Q9H3K6 86 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 HSPA4P34932 840 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 ZBTB1Q9Y2K1 713 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 SLIT2O94813 1529 aa17.12■□□□□ 0.33
CDK5RAP1-202ENST00000346416 GIGYF2Q6Y7W6 1299 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP1-202ENST00000346416 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
CDK5RAP1-202ENST00000346416 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP1-202ENST00000346416 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP1-202ENST00000346416 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
CDK5RAP1-202ENST00000346416 A0A0G2JS52 829 aa17.11■□□□□ 0.33
CDK5RAP1-202ENST00000346416 HLFQ16534 295 aa17.1■□□□□ 0.33
CDK5RAP1-202ENST00000346416 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
CDK5RAP1-202ENST00000346416 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
CDK5RAP1-202ENST00000346416 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
CDK5RAP1-202ENST00000346416 PCCAP05165 728 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP1-202ENST00000346416 MCM4P33991 863 aa17.09■□□□□ 0.33
CDK5RAP1-202ENST00000346416 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
CDK5RAP1-202ENST00000346416 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
CDK5RAP1-202ENST00000346416 ATP5JP18859 108 aa17.09■□□□□ 0.33
CDK5RAP1-202ENST00000346416 HIP1O00291 1037 aa17.08■□□□□ 0.33
CDK5RAP1-202ENST00000346416 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.33
CDK5RAP1-202ENST00000346416 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP1-202ENST00000346416 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP1-202ENST00000346416 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.33
CDK5RAP1-202ENST00000346416 GPTP24298 496 aa17.08■□□□□ 0.32
CDK5RAP1-202ENST00000346416 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP1-202ENST00000346416 TNPO1Q92973 898 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP1-202ENST00000346416 FSD1Q9BTV5 496 aa17.08■□□□□ 0.32
CDK5RAP1-202ENST00000346416 EYA2O00167 538 aa17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 GSE1Q14687 1217 aa17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 FAM227BQ96M60 508 aa17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP1-202ENST00000346416 MCM2P49736 904 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 PTH1RQ03431 593 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 NMIQ13287 307 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CIAO1O76071 339 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 DZIP3Q86Y13 1208 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 TIMM10P62072 90 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 SYNE4Q8N205 404 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 PUS3Q9BZE2 481 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP1-202ENST00000346416 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CSF1RP07333 972 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 SIK1P57059 783 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 NGLY1Q96IV0 654 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms