RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 AIMP1Q12904 312 aaKnown RBP25.62■■□□□ 1.69
CLTA-202ENST00000345519 ERFEQ4G0M1 354 aa25.62■■□□□ 1.69
CLTA-202ENST00000345519 NLRP10Q86W26 655 aa25.62■■□□□ 1.69
CLTA-202ENST00000345519 TWISTNBQ3B726 338 aaPredicted RBP25.61■■□□□ 1.69
CLTA-202ENST00000345519 SLC10A5Q5PT55 438 aa25.61■■□□□ 1.69
CLTA-202ENST00000345519 ARHGAP27Q6ZUM4 889 aa25.61■■□□□ 1.69
CLTA-202ENST00000345519 NUTM1Q86Y26 1132 aa25.61■■□□□ 1.69
CLTA-202ENST00000345519 ISCA1Q9BUE6 129 aa25.61■■□□□ 1.69
CLTA-202ENST00000345519 SPINK5Q9NQ38 1064 aaPredicted RBP25.61■■□□□ 1.69
CLTA-202ENST00000345519 PRPF40BQ6NWY9 871 aaKnown RBP25.6■■□□□ 1.69
CLTA-202ENST00000345519 C7orf43Q8WVR3 580 aa25.6■■□□□ 1.69
CLTA-202ENST00000345519 LTBP3Q9NS15 1303 aa25.6■■□□□ 1.69
CLTA-202ENST00000345519 HOXA10P31260 410 aaPredicted RBP25.59■■□□□ 1.69
CLTA-202ENST00000345519 TRIM28Q13263 835 aaKnown RBP25.59■■□□□ 1.69
CLTA-202ENST00000345519 ZNF622Q969S3 477 aaKnown RBP eCLIP25.59■■□□□ 1.693e-9■□□□□ 8.1
CLTA-202ENST00000345519 PHAXQ9H814 394 aaKnown RBP25.59■■□□□ 1.69
CLTA-202ENST00000345519 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
CLTA-202ENST00000345519 UTP14AQ9BVJ6 771 aaKnown RBP25.58■■□□□ 1.69
CLTA-202ENST00000345519 ZC3H4Q9UPT8 1303 aaKnown RBP25.58■■□□□ 1.69
CLTA-202ENST00000345519 NFKBIEO00221 500 aa25.57■■□□□ 1.68
CLTA-202ENST00000345519 GTF2E1P29083 439 aaPredicted RBP25.56■■□□□ 1.68
CLTA-202ENST00000345519 PRELPP51888 382 aa25.56■■□□□ 1.68
CLTA-202ENST00000345519 VAMP4O75379 141 aa25.55■■□□□ 1.68
CLTA-202ENST00000345519 SOGA3Q5TF21 947 aa25.55■■□□□ 1.68
CLTA-202ENST00000345519 SALL2Q9Y467 1007 aaPredicted RBP25.55■■□□□ 1.68
CLTA-202ENST00000345519 GOLGA2Q08379 1002 aa25.54■■□□□ 1.68
CLTA-202ENST00000345519 MYH16Q9H6N6 1097 aa25.54■■□□□ 1.68
CLTA-202ENST00000345519 LTBP1Q14766 1721 aa25.54■■□□□ 1.68
CLTA-202ENST00000345519 C21orf2O43822 256 aa25.53■■□□□ 1.68
CLTA-202ENST00000345519 ALDH1B1P30837 517 aa25.53■■□□□ 1.68
CLTA-202ENST00000345519 RASSF7Q02833 373 aa25.53■■□□□ 1.68
CLTA-202ENST00000345519 SH3TC1Q8TE82 1336 aa25.53■■□□□ 1.68
CLTA-202ENST00000345519 EXOSC9Q06265 439 aaKnown RBP25.52■■□□□ 1.68
CLTA-202ENST00000345519 C9orf131Q5VYM1 1079 aa25.52■■□□□ 1.68
CLTA-202ENST00000345519 C3orf67Q6ZVT6 689 aa25.52■■□□□ 1.68
CLTA-202ENST00000345519 WDR90Q96KV7 1748 aa25.51■■□□□ 1.68
CLTA-202ENST00000345519 LMNB1P20700 586 aa25.51■■□□□ 1.67
CLTA-202ENST00000345519 CRAMP1Q96RY5 1269 aa25.51■■□□□ 1.67
CLTA-202ENST00000345519 STK31Q9BXU1 1019 aa25.51■■□□□ 1.67
CLTA-202ENST00000345519 DDX58O95786 925 aaKnown RBP25.5■■□□□ 1.67
CLTA-202ENST00000345519 COL4A1P02462 1669 aa25.5■■□□□ 1.67
CLTA-202ENST00000345519 METTL22Q9BUU2 404 aaPredicted RBP25.5■■□□□ 1.67
CLTA-202ENST00000345519 TRMT112Q9UI30 125 aaKnown RBP25.5■■□□□ 1.67
CLTA-202ENST00000345519 RIC3Q7Z5B4 369 aa25.49■■□□□ 1.67
CLTA-202ENST00000345519 NLRP3Q96P20 1036 aa25.49■■□□□ 1.67
CLTA-202ENST00000345519 RNF181Q9P0P0 153 aa25.49■■□□□ 1.67
CLTA-202ENST00000345519 CCDC93Q567U6 631 aa25.48■■□□□ 1.67
CLTA-202ENST00000345519 DIEXFQ68CQ4 756 aaKnown RBP25.48■■□□□ 1.67
CLTA-202ENST00000345519 KSR2Q6VAB6 950 aa25.48■■□□□ 1.67
CLTA-202ENST00000345519 SYNE4Q8N205 404 aa25.48■■□□□ 1.67
CLTA-202ENST00000345519 CCDC191Q8NCU4 936 aa25.48■■□□□ 1.67
CLTA-202ENST00000345519 ATP5J2-PTCD1G3V325 749 aa25.47■■□□□ 1.67
CLTA-202ENST00000345519 G2E3Q7L622 706 aa25.47■■□□□ 1.67
CLTA-202ENST00000345519 RPGRQ92834 1020 aaKnown RBP25.47■■□□□ 1.67
CLTA-202ENST00000345519 TAOK3Q9H2K8 898 aa25.47■■□□□ 1.67
CLTA-202ENST00000345519 SLC4A2P04920 1241 aa25.46■■□□□ 1.67
CLTA-202ENST00000345519 ABCC4O15439 1325 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 DUOX1Q9NRD9 1551 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 SPEF2Q9C093 1822 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 PI4KAP2A4QPH2 592 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 E9PSI1 815 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 FLIIQ13045 1269 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 CC2D2BQ6DHV5 1058 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 PI4KAP1Q8N8J0 262 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 ZBTB38Q8NAP3 1195 aaPredicted RBP25.45■■□□□ 1.66
CLTA-202ENST00000345519 RBM17Q96I25 401 aaKnown RBP25.45■■□□□ 1.66
CLTA-202ENST00000345519 MAP3K2Q9Y2U5 619 aa25.45■■□□□ 1.66
CLTA-202ENST00000345519 SCN4AP35499 1836 aa25.44■■□□□ 1.66
CLTA-202ENST00000345519 TRMT2AQ8IZ69 625 aaKnown RBP25.44■■□□□ 1.66
CLTA-202ENST00000345519 MYD88Q99836 296 aa25.44■■□□□ 1.66
CLTA-202ENST00000345519 GPBP1L1Q9HC44 474 aaPredicted RBP25.44■■□□□ 1.66
CLTA-202ENST00000345519 IGKV5-2P06315 115 aa25.43■■□□□ 1.66
CLTA-202ENST00000345519 HCLS1P14317 486 aaPredicted RBP25.43■■□□□ 1.66
CLTA-202ENST00000345519 FKBP4Q02790 459 aaKnown RBP eCLIP25.43■■□□□ 1.66
CLTA-202ENST00000345519 SLFN5Q08AF3 891 aa25.43■■□□□ 1.66
CLTA-202ENST00000345519 SF3B3Q15393 1217 aaKnown RBP25.43■■□□□ 1.66
CLTA-202ENST00000345519 GRIPAP1Q4V328 841 aa25.43■■□□□ 1.66
CLTA-202ENST00000345519 RTKN2Q8IZC4 609 aa25.43■■□□□ 1.66
CLTA-202ENST00000345519 FAM89AQ96GI7 184 aa25.43■■□□□ 1.66
CLTA-202ENST00000345519 PSMD1Q99460 953 aa25.43■■□□□ 1.66
CLTA-202ENST00000345519 PCCAP05165 728 aaPredicted RBP25.42■■□□□ 1.66
CLTA-202ENST00000345519 COL4A5P29400 1685 aa25.42■■□□□ 1.66
CLTA-202ENST00000345519 CDHR2Q9BYE9 1310 aa25.41■■□□□ 1.66
CLTA-202ENST00000345519 TCERG1O14776 1098 aaKnown RBP25.41■■□□□ 1.66
CLTA-202ENST00000345519 OLFM4Q6UX06 510 aa25.41■■□□□ 1.66
CLTA-202ENST00000345519 CWC25Q9NXE8 425 aaPredicted RBP25.41■■□□□ 1.66
CLTA-202ENST00000345519 ZNF219Q9P2Y4 722 aaPredicted RBP25.41■■□□□ 1.66
CLTA-202ENST00000345519 A0A1B0GUL6 1792 aa25.41■■□□□ 1.66
CLTA-202ENST00000345519 KIF3CO14782 793 aa25.4■■□□□ 1.66
CLTA-202ENST00000345519 PPEF1O14829 653 aaPredicted RBP25.4■■□□□ 1.66
CLTA-202ENST00000345519 MIER1Q8N108 512 aa25.4■■□□□ 1.66
CLTA-202ENST00000345519 IRS4O14654 1257 aaPredicted RBP25.38■■□□□ 1.65
CLTA-202ENST00000345519 ATP6V0A2Q9Y487 856 aa25.38■■□□□ 1.65
CLTA-202ENST00000345519 NEURL1BA8MQ27 555 aa25.37■■□□□ 1.65
CLTA-202ENST00000345519 BBOX1O75936 387 aa25.37■■□□□ 1.65
CLTA-202ENST00000345519 HSP90B1P14625 803 aaKnown RBP25.37■■□□□ 1.65
CLTA-202ENST00000345519 GRAPQ13588 217 aa25.37■■□□□ 1.65
CLTA-202ENST00000345519 TMC4Q7Z404 712 aa25.37■■□□□ 1.65
CLTA-202ENST00000345519 GRAPLQ8TC17 118 aaPredicted RBP25.37■■□□□ 1.65
CLTA-202ENST00000345519 ZNF428Q96B54 188 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms