RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 TUBGCP6Q96RT7 1819 aa30.93■■■□□ 2.54
TRADD-201ENST00000345057 ERC2O15083 957 aa30.93■■■□□ 2.54
TRADD-201ENST00000345057 IFIT2P09913 472 aaKnown RBP30.92■■■□□ 2.54
TRADD-201ENST00000345057 CCDC87Q9NVE4 849 aa30.92■■■□□ 2.54
TRADD-201ENST00000345057 ARXQ96QS3 562 aa30.91■■■□□ 2.54
TRADD-201ENST00000345057 TRIM6-TRIM34B2RNG4 842 aa30.9■■■□□ 2.54
TRADD-201ENST00000345057 PCCAP05165 728 aaPredicted RBP30.9■■■□□ 2.54
TRADD-201ENST00000345057 RFX5P48382 616 aaPredicted RBP30.9■■■□□ 2.54
TRADD-201ENST00000345057 FOXO4P98177 505 aa30.9■■■□□ 2.54
TRADD-201ENST00000345057 RREB1Q92766 1687 aa30.9■■■□□ 2.54
TRADD-201ENST00000345057 GLRX3O76003 335 aaKnown RBP30.89■■■□□ 2.54
TRADD-201ENST00000345057 REC8O95072 547 aa30.89■■■□□ 2.54
TRADD-201ENST00000345057 LMBR1LQ6UX01 489 aa30.89■■■□□ 2.54
TRADD-201ENST00000345057 JARID2Q92833 1246 aaPredicted RBP30.89■■■□□ 2.54
TRADD-201ENST00000345057 GJD4Q96KN9 370 aaPredicted RBP30.89■■■□□ 2.54
TRADD-201ENST00000345057 PTPN12Q05209 780 aaKnown RBP30.89■■■□□ 2.53
TRADD-201ENST00000345057 TSHZ3Q63HK5 1081 aa30.89■■■□□ 2.53
TRADD-201ENST00000345057 DZIP3Q86Y13 1208 aaKnown RBP30.89■■■□□ 2.53
TRADD-201ENST00000345057 SASH1O94885 1247 aa30.88■■■□□ 2.53
TRADD-201ENST00000345057 PI4K2BQ8TCG2 481 aa30.88■■■□□ 2.53
TRADD-201ENST00000345057 AFF2P51816 1311 aa30.88■■■□□ 2.53
TRADD-201ENST00000345057 EIF5P55010 431 aaKnown RBP30.87■■■□□ 2.53
TRADD-201ENST00000345057 ZBTB38Q8NAP3 1195 aaPredicted RBP30.87■■■□□ 2.53
TRADD-201ENST00000345057 ECHDC1Q9NTX5 307 aa30.87■■■□□ 2.53
TRADD-201ENST00000345057 ANKRD36CQ5JPF3 1778 aa30.87■■■□□ 2.53
TRADD-201ENST00000345057 CRKLP46109 303 aaKnown RBP30.87■■■□□ 2.53
TRADD-201ENST00000345057 SIL1Q9H173 461 aa30.87■■■□□ 2.53
TRADD-201ENST00000345057 TRPC5Q9UL62 973 aaPredicted RBP30.87■■■□□ 2.53
TRADD-201ENST00000345057 AACSQ86V21 672 aa30.86■■■□□ 2.53
TRADD-201ENST00000345057 RILPL2Q969X0 211 aa30.86■■■□□ 2.53
TRADD-201ENST00000345057 PLA2G12BQ9BX93 195 aa30.86■■■□□ 2.53
TRADD-201ENST00000345057 KCNQ2O43526 872 aa30.85■■■□□ 2.53
TRADD-201ENST00000345057 INTS5Q6P9B9 1019 aaKnown RBP30.85■■■□□ 2.53
TRADD-201ENST00000345057 CNTROBQ8N137 903 aa30.85■■■□□ 2.53
TRADD-201ENST00000345057 CDHR2Q9BYE9 1310 aa30.85■■■□□ 2.53
TRADD-201ENST00000345057 ATRNO75882 1429 aa30.84■■■□□ 2.53
TRADD-201ENST00000345057 CHMP3Q9Y3E7 222 aa30.84■■■□□ 2.53
TRADD-201ENST00000345057 HLFQ16534 295 aa30.82■■■□□ 2.53
TRADD-201ENST00000345057 NLRP10Q86W26 655 aa30.82■■■□□ 2.53
TRADD-201ENST00000345057 ITPK1Q13572 414 aa30.82■■■□□ 2.52
TRADD-201ENST00000345057 KLHDC4Q8TBB5 520 aa30.82■■■□□ 2.52
TRADD-201ENST00000345057 ONECUT3O60422 494 aaPredicted RBP30.81■■■□□ 2.52
TRADD-201ENST00000345057 RTL5Q5HYW3 569 aaPredicted RBP30.81■■■□□ 2.52
TRADD-201ENST00000345057 RGS17Q9UGC6 210 aaPredicted RBP30.81■■■□□ 2.52
TRADD-201ENST00000345057 NHSQ6T4R5 1651 aa30.81■■■□□ 2.52
TRADD-201ENST00000345057 FBXO3Q9UK99 471 aa30.8■■■□□ 2.52
TRADD-201ENST00000345057 COL5A3P25940 1745 aaPredicted RBP30.8■■■□□ 2.52
TRADD-201ENST00000345057 EAF2Q96CJ1 260 aaPredicted RBP30.8■■■□□ 2.52
TRADD-201ENST00000345057 NUP98P52948 1817 aa30.79■■■□□ 2.52
TRADD-201ENST00000345057 CHMLP26374 656 aa30.79■■■□□ 2.52
TRADD-201ENST00000345057 TBC1D2BQ9UPU7 963 aa30.79■■■□□ 2.52
TRADD-201ENST00000345057 USP26Q9BXU7 913 aa30.78■■■□□ 2.52
TRADD-201ENST00000345057 CIAO1O76071 339 aa30.78■■■□□ 2.52
TRADD-201ENST00000345057 IL15P40933 162 aaPredicted RBP30.78■■■□□ 2.52
TRADD-201ENST00000345057 ESYT1Q9BSJ8 1104 aa30.78■■■□□ 2.52
TRADD-201ENST00000345057 AK9Q5TCS8 1911 aa30.77■■■□□ 2.52
TRADD-201ENST00000345057 EPB41L2O43491 1005 aaKnown RBP30.77■■■□□ 2.52
TRADD-201ENST00000345057 CCDC57Q2TAC2 916 aa30.77■■■□□ 2.52
TRADD-201ENST00000345057 ZNF34Q8IZ26 560 aa30.77■■■□□ 2.52
TRADD-201ENST00000345057 FAM89AQ96GI7 184 aa30.76■■■□□ 2.52
TRADD-201ENST00000345057 GPTP24298 496 aa30.76■■■□□ 2.51
TRADD-201ENST00000345057 TNNI3KQ59H18 835 aa30.76■■■□□ 2.51
TRADD-201ENST00000345057 GPR108Q9NPR9 543 aa30.76■■■□□ 2.51
TRADD-201ENST00000345057 FPGT-TNNI3KV9GXZ4 949 aa30.76■■■□□ 2.51
TRADD-201ENST00000345057 SLC4A3P48751 1232 aa30.75■■■□□ 2.51
TRADD-201ENST00000345057 AK7Q96M32 723 aa30.75■■■□□ 2.51
TRADD-201ENST00000345057 CSF1RP07333 972 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 TFCP2Q12800 502 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 TRMT112Q9UI30 125 aaKnown RBP30.74■■■□□ 2.51
TRADD-201ENST00000345057 ZNF652Q9Y2D9 606 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 CNTNAP4Q9C0A0 1308 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 EYA2O00167 538 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 RGL2O15211 777 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 PARP10Q53GL7 1025 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 EVI5LQ96CN4 794 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 ANP32EQ9BTT0 268 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 TBC1D2Q9BYX2 928 aa30.74■■■□□ 2.51
TRADD-201ENST00000345057 CCDC8Q9H0W5 538 aaPredicted RBP30.74■■■□□ 2.51
TRADD-201ENST00000345057 HSP90B1P14625 803 aaKnown RBP30.73■■■□□ 2.51
TRADD-201ENST00000345057 HSCBQ8IWL3 235 aa30.73■■■□□ 2.51
TRADD-201ENST00000345057 SNX21Q969T3 373 aa30.73■■■□□ 2.51
TRADD-201ENST00000345057 BTAF1O14981 1849 aa30.72■■■□□ 2.51
TRADD-201ENST00000345057 ZNF772Q68DY9 489 aaPredicted RBP30.72■■■□□ 2.51
TRADD-201ENST00000345057 CAMTA2O94983 1202 aa30.71■■■□□ 2.51
TRADD-201ENST00000345057 IFIT5Q13325 482 aaKnown RBP30.71■■■□□ 2.51
TRADD-201ENST00000345057 MYH14Q7Z406 1995 aaKnown RBP30.71■■■□□ 2.51
TRADD-201ENST00000345057 HIP1O00291 1037 aa30.7■■■□□ 2.51
TRADD-201ENST00000345057 MCCP23508 829 aa30.7■■■□□ 2.51
TRADD-201ENST00000345057 RC3H1Q5TC82 1133 aaKnown RBP30.7■■■□□ 2.51
TRADD-201ENST00000345057 IRS4O14654 1257 aaPredicted RBP30.7■■■□□ 2.5
TRADD-201ENST00000345057 ATG9AQ7Z3C6 839 aa30.7■■■□□ 2.5
TRADD-201ENST00000345057 SEPT12Q8IYM1 358 aa30.7■■■□□ 2.5
TRADD-201ENST00000345057 RUFY2Q8WXA3 655 aa30.7■■■□□ 2.5
TRADD-201ENST00000345057 KIF2CQ99661 725 aa30.7■■■□□ 2.5
TRADD-201ENST00000345057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.7■■■□□ 2.5
TRADD-201ENST00000345057 PDE8AO60658 829 aa30.69■■■□□ 2.5
TRADD-201ENST00000345057 RABEP1Q15276 862 aa30.69■■■□□ 2.5
TRADD-201ENST00000345057 TAF7LQ5H9L4 462 aa30.69■■■□□ 2.5
TRADD-201ENST00000345057 POTEAQ6S8J7 498 aa30.69■■■□□ 2.5
TRADD-201ENST00000345057 CLEC4GQ6UXB4 293 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms