RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 COL9A3Q14050 684 aaPredicted RBP15.93■□□□□ 0.14
SNX21-202ENST00000344780 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
SNX21-202ENST00000344780 TOPAZ1Q8N9V7 1692 aa15.93■□□□□ 0.14
SNX21-202ENST00000344780 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
SNX21-202ENST00000344780 XAGE3Q8WTP9 111 aa15.93■□□□□ 0.14
SNX21-202ENST00000344780 PDLIM2Q96JY6 352 aa15.93■□□□□ 0.14
SNX21-202ENST00000344780 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.93■□□□□ 0.14
SNX21-202ENST00000344780 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
SNX21-202ENST00000344780 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
SNX21-202ENST00000344780 ATP2B3Q16720 1220 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 ARHGAP23Q9P227 1491 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 RGPD1P0DJD0 1748 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 KSR2Q6VAB6 950 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 ZNF771Q7L3S4 317 aaPredicted RBP15.92■□□□□ 0.14
SNX21-202ENST00000344780 PPFIA3O75145 1194 aa15.92■□□□□ 0.14
SNX21-202ENST00000344780 PXDNQ92626 1479 aa15.91■□□□□ 0.14
SNX21-202ENST00000344780 TTC12Q9H892 705 aaPredicted RBP15.91■□□□□ 0.14
SNX21-202ENST00000344780 TMEM51Q9NW97 253 aa15.91■□□□□ 0.14
SNX21-202ENST00000344780 CAMK4Q16566 473 aa15.91■□□□□ 0.14
SNX21-202ENST00000344780 F13A1P00488 732 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 FOSBP53539 338 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 EAF2Q96CJ1 260 aaPredicted RBP15.9■□□□□ 0.14
SNX21-202ENST00000344780 RBM8AQ9Y5S9 174 aaKnown RBP15.9■□□□□ 0.14
SNX21-202ENST00000344780 SLIT1O75093 1534 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 EPHA10Q5JZY3 1008 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 LARP1BQ659C4 914 aaKnown RBP15.9■□□□□ 0.14
SNX21-202ENST00000344780 SPC24Q8NBT2 197 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
SNX21-202ENST00000344780 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX21-202ENST00000344780 NWD1Q149M9 1564 aa15.9■□□□□ 0.14
SNX21-202ENST00000344780 ZFP91Q96JP5 570 aaPredicted RBP15.9■□□□□ 0.14
SNX21-202ENST00000344780 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
SNX21-202ENST00000344780 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 AOX1Q06278 1338 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 FMN2Q9NZ56 1722 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 GRM8O00222 908 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 ADCY5O95622 1261 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
SNX21-202ENST00000344780 CCDC183Q5T5S1 534 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 TTC14Q96N46 770 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
SNX21-202ENST00000344780 HSPA2P54652 639 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 ATP6V1DQ9Y5K8 247 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
SNX21-202ENST00000344780 GOLGA6L4A6NEF3 574 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 ATF3P18847 181 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 ME3Q16798 604 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 RPAP1Q9BWH6 1393 aaPredicted RBP15.88■□□□□ 0.13
SNX21-202ENST00000344780 FER1L4A9Z1Z3 1794 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 ANKARQ7Z5J8 1434 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 KIAA2012Q0VF49 1180 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 MAP7D2Q96T17 732 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
SNX21-202ENST00000344780 SASH1O94885 1247 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 HS1BP3Q53T59 392 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 KAZALD1Q96I82 304 aa15.88■□□□□ 0.13
SNX21-202ENST00000344780 CCDC94Q9BW85 323 aaPredicted RBP15.88■□□□□ 0.13
SNX21-202ENST00000344780 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
SNX21-202ENST00000344780 UBE2HP62256 183 aa15.87■□□□□ 0.13
SNX21-202ENST00000344780 BABAM1Q9NWV8 329 aa15.87■□□□□ 0.13
SNX21-202ENST00000344780 TATP17735 454 aaPredicted RBP15.87■□□□□ 0.13
SNX21-202ENST00000344780 TAF6LQ9Y6J9 622 aa15.87■□□□□ 0.13
SNX21-202ENST00000344780 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
SNX21-202ENST00000344780 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 CREB3L3Q68CJ9 461 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 EVI5LQ96CN4 794 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 A0A0G2JS52 829 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 TPCN1Q9ULQ1 816 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 RGPD2P0DJD1 1756 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 TTC41PQ6P2S7 1318 aa15.86■□□□□ 0.13
SNX21-202ENST00000344780 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 ZNF500O60304 480 aaPredicted RBP15.85■□□□□ 0.13
SNX21-202ENST00000344780 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNX21-202ENST00000344780 CKAP2LQ8IYA6 745 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 CCDC171Q6TFL3 1326 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 CEBPZQ03701 1054 aaKnown RBP15.85■□□□□ 0.13
SNX21-202ENST00000344780 CCDC129Q6ZRS4 1044 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 LRRC2Q9BYS8 371 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 MTMR6Q9Y217 621 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 HSP90B1P14625 803 aaKnown RBP15.85■□□□□ 0.13
SNX21-202ENST00000344780 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 NEUROD6Q96NK8 337 aa15.85■□□□□ 0.13
SNX21-202ENST00000344780 LINS1Q8NG48 757 aa15.84■□□□□ 0.13
SNX21-202ENST00000344780 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
SNX21-202ENST00000344780 DDX21Q9NR30 783 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNX21-202ENST00000344780 CSPP1Q1MSJ5 1256 aa15.84■□□□□ 0.13
SNX21-202ENST00000344780 DDX11Q96FC9 970 aa15.84■□□□□ 0.13
SNX21-202ENST00000344780 SEC62Q99442 399 aaKnown RBP15.84■□□□□ 0.13
SNX21-202ENST00000344780 ERICH4A6NGS2 130 aa15.83■□□□□ 0.13
SNX21-202ENST00000344780 PDIA6Q15084 440 aa15.83■□□□□ 0.13
SNX21-202ENST00000344780 VPS53Q5VIR6 699 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms