RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 H0YIN7 160 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 PCCAP05165 728 aaPredicted RBP10.12□□□□□ -0.79
HMGCR-202ENST00000343975 PDIA6Q15084 440 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 FAM89AQ96GI7 184 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 TRIM28Q13263 835 aaKnown RBP10.12□□□□□ -0.79
HMGCR-202ENST00000343975 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 NLRP10Q86W26 655 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 ZBTB38Q8NAP3 1195 aaPredicted RBP10.12□□□□□ -0.79
HMGCR-202ENST00000343975 KCPQ6ZWJ8 1503 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 BRWD3Q6RI45 1802 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 PDE8AO60658 829 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 HLFQ16534 295 aa10.12□□□□□ -0.79
HMGCR-202ENST00000343975 RPAP2Q8IXW5 612 aaPredicted RBP10.12□□□□□ -0.79
HMGCR-202ENST00000343975 ANO8Q9HCE9 1232 aaPredicted RBP10.12□□□□□ -0.79
HMGCR-202ENST00000343975 BTAF1O14981 1849 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 NFIXQ14938 502 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 SRGAP3O43295 1099 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 GYS1P13807 737 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 BEND3Q5T5X7 828 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 TBC1D9BQ66K14 1250 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 CCDC85AQ96PX6 553 aaPredicted RBP10.11□□□□□ -0.79
HMGCR-202ENST00000343975 PPP4R2Q9NY27 417 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 LRRFIP2Q9Y608 721 aaKnown RBP10.11□□□□□ -0.79
HMGCR-202ENST00000343975 ABCC4O15439 1325 aa10.11□□□□□ -0.79
HMGCR-202ENST00000343975 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 EXOC6Q8TAG9 804 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 RBM17Q96I25 401 aaKnown RBP10.1□□□□□ -0.79
HMGCR-202ENST00000343975 ISCA1Q9BUE6 129 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 ITGB4P16144 1822 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 APBB1O00213 710 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 SMIM5Q71RC9 77 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 ERC1Q8IUD2 1116 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 PNPLA7Q6ZV29 1317 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 HCLS1P14317 486 aaPredicted RBP10.1□□□□□ -0.79
HMGCR-202ENST00000343975 ANKRD18AQ8IVF6 992 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 MEIS3Q99687 375 aa10.1□□□□□ -0.79
HMGCR-202ENST00000343975 ALDH1B1P30837 517 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 LMBR1LQ6UX01 489 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 JARID2Q92833 1246 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-202ENST00000343975 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
HMGCR-202ENST00000343975 ZNF34Q8IZ26 560 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-202ENST00000343975 SUSD4Q5VX71 490 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 CNKSR1Q969H4 720 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
HMGCR-202ENST00000343975 C2CD5Q86YS7 1000 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 CEP126Q9P2H0 1117 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 ATP10DQ9P241 1426 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 ADCY9O60503 1353 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 VPS37DQ86XT2 251 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 GTF3C3Q9Y5Q9 886 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 TOGARAM1Q9Y4F4 1720 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 LDHAL6AQ6ZMR3 332 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 BRIP1Q9BX63 1249 aa10.08□□□□□ -0.8
HMGCR-202ENST00000343975 ADAMTS7Q9UKP4 1686 aa10.07□□□□□ -0.8
HMGCR-202ENST00000343975 KDM3BQ7LBC6 1761 aa10.07□□□□□ -0.8
HMGCR-202ENST00000343975 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
HMGCR-202ENST00000343975 CCDC24Q8N4L8 307 aa10.07□□□□□ -0.8
HMGCR-202ENST00000343975 ERFEQ4G0M1 354 aa10.07□□□□□ -0.8
HMGCR-202ENST00000343975 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
HMGCR-202ENST00000343975 IGKV5-2P06315 115 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 RLBP1P12271 317 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 CTSWP56202 376 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 CDHR2Q9BYE9 1310 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 METTL24Q5JXM2 366 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 CLASRPQ8N2M8 674 aaKnown RBP10.06□□□□□ -0.8
HMGCR-202ENST00000343975 USP44Q9H0E7 712 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 TNNQ9UQP3 1299 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 H7C1W4 665 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 NBPF7P0C2Y1 421 aaPredicted RBP10.06□□□□□ -0.8
HMGCR-202ENST00000343975 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 SIL1Q9H173 461 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 ANKIB1Q9P2G1 1089 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 PXDNLA1KZ92 1463 aa10.06□□□□□ -0.8
HMGCR-202ENST00000343975 NPR1P16066 1061 aa10.05□□□□□ -0.8
HMGCR-202ENST00000343975 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
HMGCR-202ENST00000343975 BICC1Q9H694 974 aaKnown RBP10.05□□□□□ -0.8
HMGCR-202ENST00000343975 IFIT2P09913 472 aaKnown RBP10.05□□□□□ -0.8
HMGCR-202ENST00000343975 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
HMGCR-202ENST00000343975 AKAP2Q9Y2D5 859 aa10.05□□□□□ -0.8
HMGCR-202ENST00000343975 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
HMGCR-202ENST00000343975 SUCLG2Q96I99 432 aa10.05□□□□□ -0.8
HMGCR-202ENST00000343975 ZNF219Q9P2Y4 722 aaPredicted RBP10.05□□□□□ -0.8
HMGCR-202ENST00000343975 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-202ENST00000343975 ITGA6P23229 1130 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 NTSR2O95665 410 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 RPS8P62241 208 aaKnown RBP10.04□□□□□ -0.8
HMGCR-202ENST00000343975 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 ANKRD2Q9GZV1 360 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 GNL3LQ9NVN8 582 aaKnown RBP10.04□□□□□ -0.8
HMGCR-202ENST00000343975 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 IBTKQ9P2D0 1353 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-202ENST00000343975 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 RAB11FIP3O75154 756 aa10.04□□□□□ -0.8
HMGCR-202ENST00000343975 IFIT1P09914 478 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms