RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ORC3Q9UBD5 711 aaPredicted RBP17.32■□□□□ 0.36
UBE3B-202ENST00000342494 TRAF1Q13077 416 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 CTNNBL1Q8WYA6 563 aaPredicted RBP17.32■□□□□ 0.36
UBE3B-202ENST00000342494 SLC26A6Q9BXS9 759 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
UBE3B-202ENST00000342494 NF2P35240 595 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 USP8P40818 1118 aa17.32■□□□□ 0.36
UBE3B-202ENST00000342494 MTIF2P46199 727 aaKnown RBP17.32■□□□□ 0.36
UBE3B-202ENST00000342494 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
UBE3B-202ENST00000342494 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
UBE3B-202ENST00000342494 VTI1AQ96AJ9 217 aa17.31■□□□□ 0.36
UBE3B-202ENST00000342494 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
UBE3B-202ENST00000342494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE3B-202ENST00000342494 RAB11FIP4Q86YS3 637 aa17.31■□□□□ 0.36
UBE3B-202ENST00000342494 FSIP1Q8NA03 581 aa17.31■□□□□ 0.36
UBE3B-202ENST00000342494 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
UBE3B-202ENST00000342494 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-202ENST00000342494 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 ZNF804AQ7Z570 1209 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 CKAP2LQ8IYA6 745 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 NUP88Q99567 741 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-202ENST00000342494 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 CTAGE5O15320 804 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 IL2RBP14784 551 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 CTNNA2P26232 953 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 PICALMQ13492 652 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 UTP14AQ9BVJ6 771 aaKnown RBP17.3■□□□□ 0.36
UBE3B-202ENST00000342494 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 GSTTP1A0A1W2PQM5 241 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 ZSCAN12O43309 604 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC178Q5BJE1 867 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC183Q5T5S1 534 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 BICD1Q96G01 975 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 WTAPQ15007 396 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 HMG20BQ9P0W2 317 aa17.3■□□□□ 0.36
UBE3B-202ENST00000342494 FBLN1P23142 703 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 TPTE2Q6XPS3 522 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 CUL7Q14999 1698 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 TBCAO75347 108 aaKnown RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 NAA16Q6N069 864 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 ZC3H12CQ9C0D7 883 aaKnown RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 SLC4A4Q9Y6R1 1079 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 KIF5CO60282 957 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
UBE3B-202ENST00000342494 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 KRT23Q9C075 422 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 VEZTQ9HBM0 779 aa17.29■□□□□ 0.36
UBE3B-202ENST00000342494 YEATS4O95619 227 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 MCM5P33992 734 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 DNA2P51530 1060 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 CA8P35219 290 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 HOOK3Q86VS8 718 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 ERMNQ8TAM6 284 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 PANK2Q9BZ23 570 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 TEX14Q8IWB6 1497 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC66A2RUB6 948 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 UBXN4Q92575 508 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 ESR2Q92731 530 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 PUF60Q9UHX1 559 aaKnown RBP17.28■□□□□ 0.36
UBE3B-202ENST00000342494 RHPN1Q8TCX5 695 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 CPLX3Q8WVH0 158 aa17.28■□□□□ 0.36
UBE3B-202ENST00000342494 KDM5BQ9UGL1 1544 aa17.27■□□□□ 0.36
UBE3B-202ENST00000342494 GJB2P29033 226 aa17.27■□□□□ 0.36
UBE3B-202ENST00000342494 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
UBE3B-202ENST00000342494 CCDC91Q7Z6B0 441 aa17.27■□□□□ 0.36
UBE3B-202ENST00000342494 PRC1O43663 620 aa17.27■□□□□ 0.36
UBE3B-202ENST00000342494 TSHZ3Q63HK5 1081 aa17.27■□□□□ 0.36
UBE3B-202ENST00000342494 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.35
UBE3B-202ENST00000342494 TNNT1P13805 278 aa17.27■□□□□ 0.35
UBE3B-202ENST00000342494 IFIT1BQ5T764 474 aaKnown RBP17.27■□□□□ 0.35
UBE3B-202ENST00000342494 IL16Q14005 1332 aa17.27■□□□□ 0.35
UBE3B-202ENST00000342494 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
UBE3B-202ENST00000342494 PLCD4Q9BRC7 762 aa17.26■□□□□ 0.35
UBE3B-202ENST00000342494 PPFIA3O75145 1194 aa17.26■□□□□ 0.35
UBE3B-202ENST00000342494 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
UBE3B-202ENST00000342494 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
UBE3B-202ENST00000342494 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
UBE3B-202ENST00000342494 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
UBE3B-202ENST00000342494 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
UBE3B-202ENST00000342494 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
UBE3B-202ENST00000342494 HSPA2P54652 639 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 FAM114A1Q8IWE2 563 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 GRM8O00222 908 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 IL15P40933 162 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms