RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ANKRD13DQ6ZTN6 518 aa26.14■■□□□ 1.78
SYNE2-201ENST00000341472 RTKN2Q8IZC4 609 aa26.14■■□□□ 1.78
SYNE2-201ENST00000341472 NLRP3Q96P20 1036 aa26.14■■□□□ 1.78
SYNE2-201ENST00000341472 ELL2O00472 640 aaPredicted RBP26.13■■□□□ 1.77
SYNE2-201ENST00000341472 NLRP10Q86W26 655 aa26.13■■□□□ 1.77
SYNE2-201ENST00000341472 PLBD2Q8NHP8 589 aa26.13■■□□□ 1.77
SYNE2-201ENST00000341472 RBM46Q8TBY0 533 aaKnown RBP26.12■■□□□ 1.77
SYNE2-201ENST00000341472 RBM17Q96I25 401 aaKnown RBP26.12■■□□□ 1.77
SYNE2-201ENST00000341472 VEGFAP15692 232 aaPredicted RBP26.11■■□□□ 1.77
SYNE2-201ENST00000341472 FKBP4Q02790 459 aaKnown RBP eCLIP26.11■■□□□ 1.77
SYNE2-201ENST00000341472 OLFM4Q6UX06 510 aa26.11■■□□□ 1.77
SYNE2-201ENST00000341472 CRAMP1Q96RY5 1269 aa26.11■■□□□ 1.77
SYNE2-201ENST00000341472 CC2D2BQ6DHV5 1058 aa26.1■■□□□ 1.77
SYNE2-201ENST00000341472 C8orf58Q8NAV2 365 aa26.1■■□□□ 1.77
SYNE2-201ENST00000341472 CHMP4AQ9BY43 222 aa26.1■■□□□ 1.77
SYNE2-201ENST00000341472 TRMT112Q9UI30 125 aaKnown RBP26.1■■□□□ 1.77
SYNE2-201ENST00000341472 DLEC1Q9Y238 1755 aa26.1■■□□□ 1.77
SYNE2-201ENST00000341472 CCDC27Q2M243 656 aa26.09■■□□□ 1.77
SYNE2-201ENST00000341472 C3orf67Q6ZVT6 689 aa26.09■■□□□ 1.77
SYNE2-201ENST00000341472 RNF123Q5XPI4 1314 aa26.09■■□□□ 1.77
SYNE2-201ENST00000341472 WWC1Q8IX03 1113 aa26.08■■□□□ 1.77
SYNE2-201ENST00000341472 SYNE4Q8N205 404 aa26.08■■□□□ 1.77
SYNE2-201ENST00000341472 ZNF277Q9NRM2 450 aaPredicted RBP26.07■■□□□ 1.76
SYNE2-201ENST00000341472 RIC1Q4ADV7 1423 aa26.06■■□□□ 1.76
SYNE2-201ENST00000341472 COL11A2P13942 1736 aaPredicted RBP26.06■■□□□ 1.76
SYNE2-201ENST00000341472 HCLS1P14317 486 aaPredicted RBP26.06■■□□□ 1.76
SYNE2-201ENST00000341472 NCBP3Q53F19 620 aaKnown RBP26.06■■□□□ 1.76
SYNE2-201ENST00000341472 SLX4Q8IY92 1834 aa26.06■■□□□ 1.76
SYNE2-201ENST00000341472 FSTL1Q12841 308 aa26.05■■□□□ 1.76
SYNE2-201ENST00000341472 GRIPAP1Q4V328 841 aa26.05■■□□□ 1.76
SYNE2-201ENST00000341472 ISCA1Q9BUE6 129 aa26.05■■□□□ 1.76
SYNE2-201ENST00000341472 SH3TC1Q8TE82 1336 aa26.05■■□□□ 1.76
SYNE2-201ENST00000341472 ATP5J2-PTCD1G3V325 749 aa26.04■■□□□ 1.76
SYNE2-201ENST00000341472 TCERG1O14776 1098 aaKnown RBP26.04■■□□□ 1.76
SYNE2-201ENST00000341472 CCDC30Q5VVM6 783 aa26.04■■□□□ 1.76
SYNE2-201ENST00000341472 RIC3Q7Z5B4 369 aa26.04■■□□□ 1.76
SYNE2-201ENST00000341472 TMX4Q9H1E5 349 aaPredicted RBP26.04■■□□□ 1.76
SYNE2-201ENST00000341472 GOLGA2Q08379 1002 aa26.03■■□□□ 1.76
SYNE2-201ENST00000341472 PSMD1Q99460 953 aa26.03■■□□□ 1.76
SYNE2-201ENST00000341472 SBF1O95248 1867 aa26.02■■□□□ 1.76
SYNE2-201ENST00000341472 POTECB2RU33 542 aa26.02■■□□□ 1.76
SYNE2-201ENST00000341472 PPEF1O14829 653 aaPredicted RBP26.02■■□□□ 1.76
SYNE2-201ENST00000341472 DDNO94850 711 aaPredicted RBP26.02■■□□□ 1.76
SYNE2-201ENST00000341472 APLP1P51693 650 aa26.02■■□□□ 1.76
SYNE2-201ENST00000341472 TRIM28Q13263 835 aaKnown RBP26.02■■□□□ 1.76
SYNE2-201ENST00000341472 TSR2Q969E8 191 aaKnown RBP26.02■■□□□ 1.76
SYNE2-201ENST00000341472 ZNF428Q96B54 188 aa26.02■■□□□ 1.76
SYNE2-201ENST00000341472 PHAXQ9H814 394 aaKnown RBP26.02■■□□□ 1.76
SYNE2-201ENST00000341472 NUP98P52948 1817 aa26.02■■□□□ 1.76
SYNE2-201ENST00000341472 BBOX1O75936 387 aa26.01■■□□□ 1.75
SYNE2-201ENST00000341472 IARSP41252 1262 aaKnown RBP26.01■■□□□ 1.75
SYNE2-201ENST00000341472 TSPYL6Q8N831 410 aa26.01■■□□□ 1.75
SYNE2-201ENST00000341472 SMC1BQ8NDV3 1235 aa26.01■■□□□ 1.75
SYNE2-201ENST00000341472 IL16Q14005 1332 aa26■■□□□ 1.75
SYNE2-201ENST00000341472 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
SYNE2-201ENST00000341472 DDX46Q7L014 1031 aaKnown RBP25.99■■□□□ 1.75
SYNE2-201ENST00000341472 FAM89AQ96GI7 184 aa25.99■■□□□ 1.75
SYNE2-201ENST00000341472 ATP6V0A2Q9Y487 856 aa25.99■■□□□ 1.75
SYNE2-201ENST00000341472 JDP2Q8WYK2 163 aa25.98■■□□□ 1.75
SYNE2-201ENST00000341472 DDX58O95786 925 aaKnown RBP25.97■■□□□ 1.75
SYNE2-201ENST00000341472 ABCC4O15439 1325 aa25.96■■□□□ 1.75
SYNE2-201ENST00000341472 WDR63Q8IWG1 891 aa25.96■■□□□ 1.75
SYNE2-201ENST00000341472 FAM9BQ8IZU0 186 aa25.96■■□□□ 1.75
SYNE2-201ENST00000341472 FZD9O00144 591 aa25.95■■□□□ 1.74
SYNE2-201ENST00000341472 TWISTNBQ3B726 338 aaPredicted RBP25.95■■□□□ 1.74
SYNE2-201ENST00000341472 SP8Q8IXZ3 490 aa25.95■■□□□ 1.74
SYNE2-201ENST00000341472 MYD88Q99836 296 aa25.95■■□□□ 1.74
SYNE2-201ENST00000341472 STK31Q9BXU1 1019 aa25.95■■□□□ 1.74
SYNE2-201ENST00000341472 FER1L6Q2WGJ9 1857 aa25.95■■□□□ 1.74
SYNE2-201ENST00000341472 GRAPQ13588 217 aa25.94■■□□□ 1.74
SYNE2-201ENST00000341472 RTL5Q5HYW3 569 aaPredicted RBP25.94■■□□□ 1.74
SYNE2-201ENST00000341472 GRAPLQ8TC17 118 aaPredicted RBP25.94■■□□□ 1.74
SYNE2-201ENST00000341472 CEP350Q5VT06 3117 aa25.94■■□□□ 1.74
SYNE2-201ENST00000341472 TNRC6CQ9HCJ0 1690 aaKnown RBP25.93■■□□□ 1.74
SYNE2-201ENST00000341472 IQCA1LA6NCM1 817 aa25.93■■□□□ 1.74
SYNE2-201ENST00000341472 IRS4O14654 1257 aaPredicted RBP25.93■■□□□ 1.74
SYNE2-201ENST00000341472 SF3B3Q15393 1217 aaKnown RBP25.93■■□□□ 1.74
SYNE2-201ENST00000341472 SLC51AQ86UW1 340 aa25.93■■□□□ 1.74
SYNE2-201ENST00000341472 LARGE2Q8N3Y3 721 aa25.93■■□□□ 1.74
SYNE2-201ENST00000341472 ZBTB38Q8NAP3 1195 aaPredicted RBP25.92■■□□□ 1.74
SYNE2-201ENST00000341472 CCDC191Q8NCU4 936 aa25.92■■□□□ 1.74
SYNE2-201ENST00000341472 L3MBTL3Q96JM7 780 aaPredicted RBP25.92■■□□□ 1.74
SYNE2-201ENST00000341472 METTL22Q9BUU2 404 aaPredicted RBP25.92■■□□□ 1.74
SYNE2-201ENST00000341472 ZNF541Q9H0D2 1346 aa25.91■■□□□ 1.74
SYNE2-201ENST00000341472 SNED1Q8TER0 1413 aa25.91■■□□□ 1.74
SYNE2-201ENST00000341472 HSP90B1P14625 803 aaKnown RBP25.91■■□□□ 1.74
SYNE2-201ENST00000341472 EIF6P56537 245 aaKnown RBP25.91■■□□□ 1.74
SYNE2-201ENST00000341472 MPNDQ8N594 471 aa25.91■■□□□ 1.74
SYNE2-201ENST00000341472 SUPT20HQ8NEM7 779 aa25.91■■□□□ 1.74
SYNE2-201ENST00000341472 VPS33BQ9H267 617 aa25.91■■□□□ 1.74
SYNE2-201ENST00000341472 SLC4A2P04920 1241 aa25.9■■□□□ 1.74
SYNE2-201ENST00000341472 DPP8Q6V1X1 898 aaPredicted RBP25.9■■□□□ 1.74
SYNE2-201ENST00000341472 KSR2Q6VAB6 950 aa25.9■■□□□ 1.74
SYNE2-201ENST00000341472 TMC4Q7Z404 712 aa25.9■■□□□ 1.74
SYNE2-201ENST00000341472 CWC25Q9NXE8 425 aaPredicted RBP25.9■■□□□ 1.74
SYNE2-201ENST00000341472 MAP3K2Q9Y2U5 619 aa25.9■■□□□ 1.74
SYNE2-201ENST00000341472 TAF1DQ9H5J8 278 aaPredicted RBP25.89■■□□□ 1.74
SYNE2-201ENST00000341472 ARFGEF2Q9Y6D5 1785 aa25.88■■□□□ 1.73
SYNE2-201ENST00000341472 PI4KAP2A4QPH2 592 aa25.88■■□□□ 1.73
SYNE2-201ENST00000341472 PPIP5K2O43314 1243 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms