RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 CCDC83Q8IWF9 413 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 CEP170Q5SW79 1584 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 EPB41L2O43491 1005 aaKnown RBP8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 HOXB7P09629 217 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 IL2RBP14784 551 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 BCORL1Q5H9F3 1711 aa8.94□□□□□ -0.98
ATP2B4-201ENST00000341360 GOLGA8AA7E2F4 631 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 GOLGA8BA8MQT2 603 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 IFIT3O14879 490 aaKnown RBP8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 NCOA7Q8NI08 942 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 ERMNQ8TAM6 284 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 CALML4Q96GE6 196 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 FEZ1Q99689 392 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 LRRFIP2Q9Y608 721 aaKnown RBP8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 NPATQ14207 1427 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 GOLGA6L7A0A1B0GV03 622 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 ZSCAN12O43309 604 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 NEBLO76041 1014 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 BRPF1P55201 1214 aaPredicted RBP8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 ANAPC15P60006 121 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 SEPT7Q16181 437 aaKnown RBP8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 DCAF5Q96JK2 942 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 ANKRD2Q9GZV1 360 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 BOLA2Q9H3K6 86 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 POLD1P28340 1107 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 MCM5P33992 734 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 NF2P35240 595 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 MAP3K2Q9Y2U5 619 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 SYCP2Q9BX26 1530 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 ZNF771Q7L3S4 317 aaPredicted RBP8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 LINS1Q8NG48 757 aa8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 EIF4G3O43432 1585 aaKnown RBP8.93□□□□□ -0.98
ATP2B4-201ENST00000341360 RANBP6O60518 1105 aaKnown RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC172P0C7W6 258 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 CALM1P0DP23 149 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 CALM2P0DP24 149 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 CALM3P0DP25 149 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 KSR2Q6VAB6 950 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 TPTE2Q6XPS3 522 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 ZNF804AQ7Z570 1209 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 NUTM1Q86Y26 1132 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 PDCL2Q8N4E4 241 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 ZSCAN16Q9H4T2 348 aaPredicted RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 KAT14Q9H8E8 782 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 MATR3P43243 847 aaKnown RBP eCLIP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 SPA17Q15506 151 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 PRPF40BQ6NWY9 871 aaKnown RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 MFSD6Q6ZSS7 791 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 TRMT2AQ8IZ69 625 aaKnown RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 RNF214Q8ND24 703 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 IARSP41252 1262 aaKnown RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 PCDH11XQ9BZA7 1347 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 PCDH11YQ9BZA8 1340 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 NLRP5P59047 1200 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 CEBPZQ03701 1054 aaKnown RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 ESR2Q92731 530 aa8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 NAP1L4Q99733 375 aaKnown RBP8.92□□□□□ -0.98
ATP2B4-201ENST00000341360 TARBP1Q13395 1621 aaKnown RBP8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 ATP10AO60312 1499 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 NEO1Q92859 1461 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 GOLGA6L9A6NEM1 432 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 ARHGAP29Q52LW3 1261 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 HS1BP3Q53T59 392 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC112Q8NEF3 446 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 ARHGEF10O15013 1369 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 NEFHP12036 1026 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 PARP10Q53GL7 1025 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC183Q5T5S1 534 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 DHX37Q8IY37 1157 aaKnown RBP8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 DDX12PQ92771 950 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 HOOK2Q96ED9 719 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 SCLT1Q96NL6 688 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 RMND1Q9NWS8 449 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 ZNF521Q96K83 1311 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 CCDC66A2RUB6 948 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 UBE3BQ7Z3V4 1068 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 TTC41PQ6P2S7 1318 aa8.91□□□□□ -0.98
ATP2B4-201ENST00000341360 PI4KAP2A4QPH2 592 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 TSPY2A6NKD2 308 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 TRIM27P14373 513 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 ATP2B3Q16720 1220 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 PI4KAP1Q8N8J0 262 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 TNPO1Q92973 898 aaKnown RBP8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 FERMT1Q9BQL6 677 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 RAD50Q92878 1312 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 USO1O60763 962 aaKnown RBP8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 KIF4AO95239 1232 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 PRDM15P57071 1507 aaPredicted RBP8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 SMC5Q8IY18 1101 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 UTP14AQ9BVJ6 771 aaKnown RBP8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 GOLIM4O00461 696 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 GBP2P32456 591 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms