RNA–Protein interactions for RNA: ENST00000341040.11

LCN10-201, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 1,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-201ENST00000341040 SYNE4Q8N205 404 aa19■□□□□ 0.63
LCN10-201ENST00000341040 LINS1Q8NG48 757 aa19■□□□□ 0.63
LCN10-201ENST00000341040 PANK1Q8TE04 598 aa19■□□□□ 0.63
LCN10-201ENST00000341040 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
LCN10-201ENST00000341040 NPHP1O15259 732 aa18.99■□□□□ 0.63
LCN10-201ENST00000341040 PARP10Q53GL7 1025 aa18.99■□□□□ 0.63
LCN10-201ENST00000341040 C20orf194Q5TEA3 1177 aa18.99■□□□□ 0.63
LCN10-201ENST00000341040 DZIP1LQ8IYY4 767 aaKnown RBP18.99■□□□□ 0.63
LCN10-201ENST00000341040 SGIP1Q9BQI5 828 aa18.99■□□□□ 0.63
LCN10-201ENST00000341040 CWC25Q9NXE8 425 aaPredicted RBP18.99■□□□□ 0.63
LCN10-201ENST00000341040 ABCC4O15439 1325 aa18.99■□□□□ 0.63
LCN10-201ENST00000341040 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 PPP1R42Q7Z4L9 355 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 TMEM57Q8N5G2 664 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 CCDC191Q8NCU4 936 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 UTP14AQ9BVJ6 771 aaKnown RBP18.98■□□□□ 0.63
LCN10-201ENST00000341040 TRMT112Q9UI30 125 aaKnown RBP18.98■□□□□ 0.63
LCN10-201ENST00000341040 SRCAPQ6ZRS2 3230 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 NTSR2O95665 410 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 TRIM28Q13263 835 aaKnown RBP18.98■□□□□ 0.63
LCN10-201ENST00000341040 FAM89AQ96GI7 184 aa18.98■□□□□ 0.63
LCN10-201ENST00000341040 GTF2E1P29083 439 aaPredicted RBP18.97■□□□□ 0.63
LCN10-201ENST00000341040 PRR5LQ6MZQ0 368 aa18.97■□□□□ 0.63
LCN10-201ENST00000341040 CCT4P50991 539 aaKnown RBP18.96■□□□□ 0.63
LCN10-201ENST00000341040 GCKRQ14397 625 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 CNBD1Q8NA66 436 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 PXDNLA1KZ92 1463 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 ALDH1L1O75891 902 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 NYXQ9GZU5 481 aa18.96■□□□□ 0.63
LCN10-201ENST00000341040 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
LCN10-201ENST00000341040 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
LCN10-201ENST00000341040 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
LCN10-201ENST00000341040 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
LCN10-201ENST00000341040 C9orf78Q9NZ63 289 aaPredicted RBP18.94■□□□□ 0.62
LCN10-201ENST00000341040 ABCC12Q96J65 1359 aa18.94■□□□□ 0.62
LCN10-201ENST00000341040 N4BP2Q86UW6 1770 aaPredicted RBP18.94■□□□□ 0.62
LCN10-201ENST00000341040 HCLS1P14317 486 aaPredicted RBP18.93■□□□□ 0.62
LCN10-201ENST00000341040 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
LCN10-201ENST00000341040 ZBTB38Q8NAP3 1195 aaPredicted RBP18.93■□□□□ 0.62
LCN10-201ENST00000341040 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
LCN10-201ENST00000341040 PCCAP05165 728 aaPredicted RBP18.93■□□□□ 0.62
LCN10-201ENST00000341040 ST5P78524 1137 aa18.93■□□□□ 0.62
LCN10-201ENST00000341040 SH3TC1Q8TE82 1336 aa18.93■□□□□ 0.62
LCN10-201ENST00000341040 H7C1W4 665 aa18.92■□□□□ 0.62
LCN10-201ENST00000341040 GRM8O00222 908 aa18.91■□□□□ 0.62
LCN10-201ENST00000341040 NBPF7P0C2Y1 421 aaPredicted RBP18.91■□□□□ 0.62
LCN10-201ENST00000341040 USP44Q9H0E7 712 aa18.91■□□□□ 0.62
LCN10-201ENST00000341040 IBTKQ9P2D0 1353 aaPredicted RBP18.91■□□□□ 0.62
LCN10-201ENST00000341040 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
LCN10-201ENST00000341040 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
LCN10-201ENST00000341040 CASP7P55210 303 aa18.91■□□□□ 0.62
LCN10-201ENST00000341040 MEIS3Q99687 375 aa18.91■□□□□ 0.62
LCN10-201ENST00000341040 IRX6P78412 446 aaPredicted RBP18.9■□□□□ 0.62
LCN10-201ENST00000341040 MVPQ14764 893 aaKnown RBP18.9■□□□□ 0.62
LCN10-201ENST00000341040 C3orf67Q6ZVT6 689 aa18.9■□□□□ 0.62
LCN10-201ENST00000341040 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
LCN10-201ENST00000341040 NEFLP07196 543 aa18.89■□□□□ 0.61
LCN10-201ENST00000341040 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
LCN10-201ENST00000341040 DDX60Q8IY21 1712 aaKnown RBP18.89■□□□□ 0.61
LCN10-201ENST00000341040 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
LCN10-201ENST00000341040 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
LCN10-201ENST00000341040 C10orf71Q711Q0 1435 aa18.88■□□□□ 0.61
LCN10-201ENST00000341040 CCDC85AQ96PX6 553 aaPredicted RBP18.88■□□□□ 0.61
LCN10-201ENST00000341040 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
LCN10-201ENST00000341040 CRBNQ96SW2 442 aa18.87■□□□□ 0.61
LCN10-201ENST00000341040 BRIP1Q9BX63 1249 aa18.87■□□□□ 0.61
LCN10-201ENST00000341040 CDHR2Q9BYE9 1310 aa18.87■□□□□ 0.61
LCN10-201ENST00000341040 LAMB2P55268 1798 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 CHRNA5P30532 468 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 EPHA10Q5JZY3 1008 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 FHDC1Q9C0D6 1143 aaPredicted RBP18.86■□□□□ 0.61
LCN10-201ENST00000341040 UTYO14607 1347 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 ZBTB7BO15156 539 aaPredicted RBP18.86■□□□□ 0.61
LCN10-201ENST00000341040 PDE8AO60658 829 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 UBTFL1P0CB47 393 aaPredicted RBP18.86■□□□□ 0.61
LCN10-201ENST00000341040 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 C1orf115Q9H7X2 142 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 HDAC5Q9UQL6 1122 aa18.86■□□□□ 0.61
LCN10-201ENST00000341040 KIF13BQ9NQT8 1826 aa18.85■□□□□ 0.61
LCN10-201ENST00000341040 C2CD5Q86YS7 1000 aa18.85■□□□□ 0.61
LCN10-201ENST00000341040 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
LCN10-201ENST00000341040 KAZALD1Q96I82 304 aa18.85■□□□□ 0.61
LCN10-201ENST00000341040 WWC3Q9ULE0 1092 aa18.85■□□□□ 0.61
LCN10-201ENST00000341040 MYH3P11055 1940 aa18.85■□□□□ 0.61
LCN10-201ENST00000341040 A0A0G2JLW4 131 aa18.84■□□□□ 0.61
LCN10-201ENST00000341040 GNAI3P08754 354 aa18.84■□□□□ 0.61
LCN10-201ENST00000341040 PDE6BP35913 854 aa18.84■□□□□ 0.61
LCN10-201ENST00000341040 LRRFIP2Q9Y608 721 aaKnown RBP18.84■□□□□ 0.61
LCN10-201ENST00000341040 LRP5O75197 1615 aa18.84■□□□□ 0.61
LCN10-201ENST00000341040 DPEP1P16444 411 aa18.83■□□□□ 0.61
LCN10-201ENST00000341040 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.61
LCN10-201ENST00000341040 CD2APQ9Y5K6 639 aa18.83■□□□□ 0.61
LCN10-201ENST00000341040 COL11A2P13942 1736 aaPredicted RBP18.83■□□□□ 0.61
LCN10-201ENST00000341040 TAF1P21675 1872 aa18.83■□□□□ 0.6
LCN10-201ENST00000341040 HSP90B1P14625 803 aaKnown RBP18.83■□□□□ 0.6
LCN10-201ENST00000341040 FOXO4P98177 505 aa18.83■□□□□ 0.6
LCN10-201ENST00000341040 CHMP3Q9Y3E7 222 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms