RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 BRD1O95696 1058 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 OVOS2A0A0G2JMS6 1433 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 TPM2P07951 284 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 USP16Q9Y5T5 823 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
RANBP3-202ENST00000340578 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
RANBP3-202ENST00000340578 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
RANBP3-202ENST00000340578 SASH1O94885 1247 aa13.67□□□□□ -0.22
RANBP3-202ENST00000340578 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
RANBP3-202ENST00000340578 EAF2Q96CJ1 260 aaPredicted RBP13.67□□□□□ -0.22
RANBP3-202ENST00000340578 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
RANBP3-202ENST00000340578 KCNJ4P48050 445 aa13.67□□□□□ -0.22
RANBP3-202ENST00000340578 PTH1RQ03431 593 aa13.67□□□□□ -0.22
RANBP3-202ENST00000340578 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
RANBP3-202ENST00000340578 USP42Q9H9J4 1324 aaKnown RBP13.67□□□□□ -0.22
RANBP3-202ENST00000340578 AK2P54819 239 aa13.66□□□□□ -0.22
RANBP3-202ENST00000340578 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
RANBP3-202ENST00000340578 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
RANBP3-202ENST00000340578 NEURL1BA8MQ27 555 aa13.66□□□□□ -0.22
RANBP3-202ENST00000340578 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
RANBP3-202ENST00000340578 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
RANBP3-202ENST00000340578 BOLA2Q9H3K6 86 aa13.66□□□□□ -0.22
RANBP3-202ENST00000340578 TLR7Q9NYK1 1049 aaKnown RBP13.66□□□□□ -0.22
RANBP3-202ENST00000340578 NSFL1CQ9UNZ2 370 aaKnown RBP13.66□□□□□ -0.22
RANBP3-202ENST00000340578 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
RANBP3-202ENST00000340578 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
RANBP3-202ENST00000340578 GCKRQ14397 625 aa13.65□□□□□ -0.22
RANBP3-202ENST00000340578 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
RANBP3-202ENST00000340578 DTNBO60941 627 aa13.65□□□□□ -0.22
RANBP3-202ENST00000340578 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
RANBP3-202ENST00000340578 CABP4P57796 275 aa13.65□□□□□ -0.22
RANBP3-202ENST00000340578 ZNF445P59923 1031 aa13.65□□□□□ -0.22
RANBP3-202ENST00000340578 IL17RAQ96F46 866 aa13.65□□□□□ -0.22
RANBP3-202ENST00000340578 JAKMIP1Q96N16 626 aaKnown RBP13.65□□□□□ -0.22
RANBP3-202ENST00000340578 CYP27B1O15528 508 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 APPP05067 770 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
RANBP3-202ENST00000340578 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
RANBP3-202ENST00000340578 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
RANBP3-202ENST00000340578 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 SYCE3A1L190 88 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 FAM193AP78312 1265 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 ADCK5Q3MIX3 580 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 FSD1Q9BTV5 496 aa13.64□□□□□ -0.23
RANBP3-202ENST00000340578 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
RANBP3-202ENST00000340578 UTYO14607 1347 aa13.63□□□□□ -0.23
RANBP3-202ENST00000340578 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
RANBP3-202ENST00000340578 TTC14Q96N46 770 aa13.63□□□□□ -0.23
RANBP3-202ENST00000340578 MEGF6O75095 1541 aa13.63□□□□□ -0.23
RANBP3-202ENST00000340578 ESPNB1AK53 854 aa13.63□□□□□ -0.23
RANBP3-202ENST00000340578 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
RANBP3-202ENST00000340578 UBE3BQ7Z3V4 1068 aa13.63□□□□□ -0.23
RANBP3-202ENST00000340578 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
RANBP3-202ENST00000340578 ARID3AQ99856 593 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■□□□□ 10
RANBP3-202ENST00000340578 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 MST1RQ04912 1400 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
RANBP3-202ENST00000340578 MBD3O95983 291 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
RANBP3-202ENST00000340578 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
RANBP3-202ENST00000340578 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 CYP46A1Q9Y6A2 500 aa13.62□□□□□ -0.23
RANBP3-202ENST00000340578 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
RANBP3-202ENST00000340578 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
RANBP3-202ENST00000340578 RGPD5Q99666 1765 aa13.61□□□□□ -0.23
RANBP3-202ENST00000340578 A0A087WZG4 1122 aa13.61□□□□□ -0.23
RANBP3-202ENST00000340578 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
RANBP3-202ENST00000340578 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
RANBP3-202ENST00000340578 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
RANBP3-202ENST00000340578 LARGE1O95461 756 aa13.6□□□□□ -0.23
RANBP3-202ENST00000340578 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
RANBP3-202ENST00000340578 HIP1O00291 1037 aa13.6□□□□□ -0.23
RANBP3-202ENST00000340578 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
RANBP3-202ENST00000340578 A0A0D9SFI3 127 aa13.6□□□□□ -0.23
RANBP3-202ENST00000340578 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
RANBP3-202ENST00000340578 SYT1P21579 422 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 STX6O43752 255 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 TFCP2Q12800 502 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
RANBP3-202ENST00000340578 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms