RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
CPSF7-201ENST00000340437 LETM1O95202 739 aaPredicted RBP17.13■□□□□ 0.33
CPSF7-201ENST00000340437 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
CPSF7-201ENST00000340437 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
CPSF7-201ENST00000340437 LARP1Q6PKG0 1096 aaKnown RBP17.13■□□□□ 0.33
CPSF7-201ENST00000340437 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
CPSF7-201ENST00000340437 NUP62CLQ9H1M0 184 aa17.13■□□□□ 0.33
CPSF7-201ENST00000340437 TECPR2O15040 1411 aa17.13■□□□□ 0.33
CPSF7-201ENST00000340437 SPATA32Q96LK8 384 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 TNMDQ9H2S6 317 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 H3BQV1 296 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 SLC27A2O14975 620 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 PTGS1P23219 599 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 CBX1P83916 185 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 UVSSAQ2YD98 709 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
CPSF7-201ENST00000340437 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-201ENST00000340437 JAK2O60674 1132 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 SASH1O94885 1247 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 ST3GAL1Q11201 340 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 ZNF589Q86UQ0 364 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-201ENST00000340437 A0A087WWV3 80 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 ZNF592Q92610 1267 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 MYD88Q99836 296 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 ZSWIM6Q9HCJ5 1215 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 ADCY9O60503 1353 aa17.11■□□□□ 0.33
CPSF7-201ENST00000340437 GRM8O00222 908 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 IP6K1Q92551 441 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
CPSF7-201ENST00000340437 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
CPSF7-201ENST00000340437 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-201ENST00000340437 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-201ENST00000340437 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-201ENST00000340437 SLFNL1Q499Z3 407 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 ANO6Q4KMQ2 910 aa17.1■□□□□ 0.33
CPSF7-201ENST00000340437 SETD1AO15047 1707 aaKnown RBP17.09■□□□□ 0.33
CPSF7-201ENST00000340437 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 RNMTO43148 476 aaKnown RBP17.09■□□□□ 0.33
CPSF7-201ENST00000340437 PSMA5P28066 241 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 GUCY1B3Q02153 619 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 LRMPQ12912 555 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 RNF20Q5VTR2 975 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 ERC1Q8IUD2 1116 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
CPSF7-201ENST00000340437 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.33
CPSF7-201ENST00000340437 TERF1P54274 439 aa17.08■□□□□ 0.33
CPSF7-201ENST00000340437 TYRO3Q06418 890 aa17.08■□□□□ 0.33
CPSF7-201ENST00000340437 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
CPSF7-201ENST00000340437 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
CPSF7-201ENST00000340437 C16orf45Q96MC5 204 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-201ENST00000340437 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
CPSF7-201ENST00000340437 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
CPSF7-201ENST00000340437 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-201ENST00000340437 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
CPSF7-201ENST00000340437 NRKQ7Z2Y5 1582 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 DNAJC25Q9H1X3 360 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 KIF3AQ9Y496 699 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 MYRIPQ8NFW9 859 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
CPSF7-201ENST00000340437 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
CPSF7-201ENST00000340437 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
CPSF7-201ENST00000340437 KCNF1Q9H3M0 494 aa17.06■□□□□ 0.32
CPSF7-201ENST00000340437 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 MAP4K1Q92918 833 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 FTOQ9C0B1 505 aaKnown RBP eCLIP17.05■□□□□ 0.32
CPSF7-201ENST00000340437 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-201ENST00000340437 IGSF3O75054 1194 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 NR1I2O75469 434 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 PPP4R3BQ5MIZ7 849 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 BRF1Q92994 677 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
CPSF7-201ENST00000340437 PDCP20941 246 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 TFCP2Q12800 502 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 Q6ZUG5 572 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 CBX8Q9HC52 389 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 AGLP35573 1532 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 RIOK3O14730 519 aaKnown RBP17.04■□□□□ 0.32
CPSF7-201ENST00000340437 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
CPSF7-201ENST00000340437 MRVI1Q9Y6F6 885 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms