RNA–Protein interactions for RNA: ENST00000340273.4

MMP13-202, Transcript of matrix metallopeptidase 13, humanhuman

TSL 1 (best) BASIC

Gene MMP13, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-202ENST00000340273 PALD1Q9ULE6 856 aa10.41□□□□□ -0.74
MMP13-202ENST00000340273 ZNF330Q9Y3S2 320 aaPredicted RBP10.41□□□□□ -0.74
MMP13-202ENST00000340273 DDX49Q9Y6V7 483 aaKnown RBP10.41□□□□□ -0.74
MMP13-202ENST00000340273 C5P01031 1676 aa10.4□□□□□ -0.74
MMP13-202ENST00000340273 PKD1L3Q7Z443 1732 aa10.4□□□□□ -0.74
MMP13-202ENST00000340273 EPB41L2O43491 1005 aaKnown RBP10.4□□□□□ -0.74
MMP13-202ENST00000340273 RAB11FIP3O75154 756 aa10.4□□□□□ -0.74
MMP13-202ENST00000340273 UBTFL1P0CB47 393 aaPredicted RBP10.4□□□□□ -0.74
MMP13-202ENST00000340273 EIF4A1P60842 406 aaKnown RBP10.4□□□□□ -0.74
MMP13-202ENST00000340273 ZNF496Q96IT1 587 aaPredicted RBP10.4□□□□□ -0.74
MMP13-202ENST00000340273 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.74
MMP13-202ENST00000340273 THSD7AQ9UPZ6 1657 aa10.4□□□□□ -0.75
MMP13-202ENST00000340273 PLEKHG2Q9H7P9 1386 aa10.4□□□□□ -0.75
MMP13-202ENST00000340273 WNK3Q9BYP7 1800 aa10.39□□□□□ -0.75
MMP13-202ENST00000340273 ATP6V1AP38606 617 aa10.39□□□□□ -0.75
MMP13-202ENST00000340273 TMX3Q96JJ7 454 aa10.39□□□□□ -0.75
MMP13-202ENST00000340273 PPP1R9BQ96SB3 815 aa10.39□□□□□ -0.75
MMP13-202ENST00000340273 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
MMP13-202ENST00000340273 SCN11AQ9UI33 1791 aa10.39□□□□□ -0.75
MMP13-202ENST00000340273 CCDC173Q0VFZ6 552 aa10.38□□□□□ -0.75
MMP13-202ENST00000340273 PI4K2BQ8TCG2 481 aa10.38□□□□□ -0.75
MMP13-202ENST00000340273 USP42Q9H9J4 1324 aaKnown RBP10.38□□□□□ -0.75
MMP13-202ENST00000340273 ADCY9O60503 1353 aa10.38□□□□□ -0.75
MMP13-202ENST00000340273 BRWD3Q6RI45 1802 aa10.38□□□□□ -0.75
MMP13-202ENST00000340273 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 SNRPA1P09661 255 aaKnown RBP10.37□□□□□ -0.75
MMP13-202ENST00000340273 PIP4K2AP48426 406 aaPredicted RBP10.37□□□□□ -0.75
MMP13-202ENST00000340273 NEK4P51957 841 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 ZSCAN23Q3MJ62 389 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 BEND3Q5T5X7 828 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 PPP1R42Q7Z4L9 355 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 DNAJC10Q8IXB1 793 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 GPT2Q8TD30 523 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 CCNL1Q9UK58 526 aaPredicted RBP10.37□□□□□ -0.75
MMP13-202ENST00000340273 PALLDQ8WX93 1383 aa10.37□□□□□ -0.75
MMP13-202ENST00000340273 ESPNB1AK53 854 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 BRD1O95696 1058 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 MYL6BP14649 208 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 CAVIN1Q6NZI2 390 aaKnown RBP10.36□□□□□ -0.75
MMP13-202ENST00000340273 NUTM1Q86Y26 1132 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 INTS4Q96HW7 963 aaKnown RBP10.36□□□□□ -0.75
MMP13-202ENST00000340273 IL25Q9H293 177 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 ANO2Q9NQ90 1003 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 BCL9O00512 1426 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 SHANK3Q9BYB0 1731 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 HEG1Q9ULI3 1381 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 LOC102724428A0A0B4J2F2 783 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 STARD3NLO95772 234 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 ANXA1P04083 346 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 HSPA4P34932 840 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 BAG6P46379 1132 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 NASPP49321 788 aaPredicted RBP10.36□□□□□ -0.75
MMP13-202ENST00000340273 SIK1P57059 783 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 EN1Q05925 392 aaPredicted RBP10.36□□□□□ -0.75
MMP13-202ENST00000340273 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
MMP13-202ENST00000340273 RHPN1Q8TCX5 695 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 DNAAF4Q8WXU2 420 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 KIF1BPQ96EK5 621 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
MMP13-202ENST00000340273 DOT1LQ8TEK3 1739 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 MRC1P22897 1456 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 RAD50Q92878 1312 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
MMP13-202ENST00000340273 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
MMP13-202ENST00000340273 SURF6O75683 361 aaKnown RBP10.35□□□□□ -0.75
MMP13-202ENST00000340273 A1BGP04217 495 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 MTX1Q13505 466 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 CHMP4AQ9BY43 222 aa10.35□□□□□ -0.75
MMP13-202ENST00000340273 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
MMP13-202ENST00000340273 RPAP1Q9BWH6 1393 aaPredicted RBP10.34□□□□□ -0.75
MMP13-202ENST00000340273 AFDNP55196 1824 aaKnown RBP10.34□□□□□ -0.75
MMP13-202ENST00000340273 SGSM2O43147 1006 aa10.34□□□□□ -0.75
MMP13-202ENST00000340273 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
MMP13-202ENST00000340273 NBPF7P0C2Y1 421 aaPredicted RBP10.34□□□□□ -0.75
MMP13-202ENST00000340273 ILDR2Q71H61 639 aa10.34□□□□□ -0.75
MMP13-202ENST00000340273 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
MMP13-202ENST00000340273 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
MMP13-202ENST00000340273 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
MMP13-202ENST00000340273 TTC41PQ6P2S7 1318 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 MBD3O95983 291 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
MMP13-202ENST00000340273 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 HSP90AB4PQ58FF6 505 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 TRIM44Q96DX7 344 aaPredicted RBP10.33□□□□□ -0.76
MMP13-202ENST00000340273 CHAMP1Q96JM3 812 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 RBSNQ9H1K0 784 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 TCHHQ07283 1943 aa10.33□□□□□ -0.76
MMP13-202ENST00000340273 TOGARAM1Q9Y4F4 1720 aa10.32□□□□□ -0.76
MMP13-202ENST00000340273 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
MMP13-202ENST00000340273 PHF14O94880 888 aa10.32□□□□□ -0.76
MMP13-202ENST00000340273 MAP4K4O95819 1239 aaPredicted RBP10.32□□□□□ -0.76
MMP13-202ENST00000340273 ITPK1Q13572 414 aa10.32□□□□□ -0.76
MMP13-202ENST00000340273 EZH2Q15910 746 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms