RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PIM2Q9P1W9 311 aa19.54■□□□□ 0.72
UBE3B-201ENST00000340074 ABCC12Q96J65 1359 aa19.54■□□□□ 0.72
UBE3B-201ENST00000340074 FLIIQ13045 1269 aa19.53■□□□□ 0.72
UBE3B-201ENST00000340074 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
UBE3B-201ENST00000340074 BCS1LQ9Y276 419 aa19.53■□□□□ 0.72
UBE3B-201ENST00000340074 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
UBE3B-201ENST00000340074 ADCY9O60503 1353 aa19.53■□□□□ 0.72
UBE3B-201ENST00000340074 DDX60Q8IY21 1712 aaKnown RBP19.53■□□□□ 0.72
UBE3B-201ENST00000340074 PI4KAP2A4QPH2 592 aa19.52■□□□□ 0.72
UBE3B-201ENST00000340074 KSR2Q6VAB6 950 aa19.52■□□□□ 0.72
UBE3B-201ENST00000340074 PI4KAP1Q8N8J0 262 aa19.52■□□□□ 0.72
UBE3B-201ENST00000340074 MYD88Q99836 296 aa19.52■□□□□ 0.72
UBE3B-201ENST00000340074 PDZRN3Q9UPQ7 1066 aa19.52■□□□□ 0.72
UBE3B-201ENST00000340074 FKBP5Q13451 457 aaPredicted RBP19.51■□□□□ 0.71
UBE3B-201ENST00000340074 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
UBE3B-201ENST00000340074 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
UBE3B-201ENST00000340074 GRIN3BO60391 1043 aa19.51■□□□□ 0.71
UBE3B-201ENST00000340074 DALRD3Q5D0E6 543 aaKnown RBP19.51■□□□□ 0.71
UBE3B-201ENST00000340074 TRMT112Q9UI30 125 aaKnown RBP19.51■□□□□ 0.71
UBE3B-201ENST00000340074 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
UBE3B-201ENST00000340074 KLRG2A4D1S0 409 aaPredicted RBP19.5■□□□□ 0.71
UBE3B-201ENST00000340074 SRGNP10124 158 aa19.5■□□□□ 0.71
UBE3B-201ENST00000340074 TRIM28Q13263 835 aaKnown RBP19.5■□□□□ 0.71
UBE3B-201ENST00000340074 SYNE4Q8N205 404 aa19.5■□□□□ 0.71
UBE3B-201ENST00000340074 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
UBE3B-201ENST00000340074 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
UBE3B-201ENST00000340074 TTLL6Q8N841 843 aa19.49■□□□□ 0.71
UBE3B-201ENST00000340074 RIC1Q4ADV7 1423 aa19.49■□□□□ 0.71
UBE3B-201ENST00000340074 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
UBE3B-201ENST00000340074 MASTLQ96GX5 879 aa19.48■□□□□ 0.71
UBE3B-201ENST00000340074 SH3TC1Q8TE82 1336 aa19.48■□□□□ 0.71
UBE3B-201ENST00000340074 CT47B1P0C2W7 299 aaPredicted RBP19.47■□□□□ 0.71
UBE3B-201ENST00000340074 TAF1P21675 1872 aa19.47■□□□□ 0.71
UBE3B-201ENST00000340074 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
UBE3B-201ENST00000340074 SLC10A5Q5PT55 438 aa19.47■□□□□ 0.71
UBE3B-201ENST00000340074 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
UBE3B-201ENST00000340074 MRPL50Q8N5N7 158 aaKnown RBP19.47■□□□□ 0.71
UBE3B-201ENST00000340074 CCDC191Q8NCU4 936 aa19.47■□□□□ 0.71
UBE3B-201ENST00000340074 MYH3P11055 1940 aa19.47■□□□□ 0.71
UBE3B-201ENST00000340074 IGKV5-2P06315 115 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 NPR1P16066 1061 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 C3orf67Q6ZVT6 689 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 FAM89AQ96GI7 184 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 BCL2L13Q9BXK5 485 aa19.46■□□□□ 0.71
UBE3B-201ENST00000340074 F6X3S4 739 aa19.45■□□□□ 0.7
UBE3B-201ENST00000340074 HCLS1P14317 486 aaPredicted RBP19.45■□□□□ 0.7
UBE3B-201ENST00000340074 ALDH1L2Q3SY69 923 aa19.45■□□□□ 0.7
UBE3B-201ENST00000340074 CRY2Q49AN0 593 aa19.45■□□□□ 0.7
UBE3B-201ENST00000340074 RTL5Q5HYW3 569 aaPredicted RBP19.45■□□□□ 0.7
UBE3B-201ENST00000340074 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
UBE3B-201ENST00000340074 SBF1O95248 1867 aa19.45■□□□□ 0.7
UBE3B-201ENST00000340074 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
UBE3B-201ENST00000340074 CNKSR1Q969H4 720 aa19.44■□□□□ 0.7
UBE3B-201ENST00000340074 NLRP3Q96P20 1036 aa19.44■□□□□ 0.7
UBE3B-201ENST00000340074 FER1L6Q2WGJ9 1857 aa19.44■□□□□ 0.7
UBE3B-201ENST00000340074 NEURL1BA8MQ27 555 aa19.43■□□□□ 0.7
UBE3B-201ENST00000340074 ZBTB38Q8NAP3 1195 aaPredicted RBP19.43■□□□□ 0.7
UBE3B-201ENST00000340074 RPGRQ92834 1020 aaKnown RBP19.43■□□□□ 0.7
UBE3B-201ENST00000340074 SMC4Q9NTJ3 1288 aa19.43■□□□□ 0.7
UBE3B-201ENST00000340074 PRPF40BQ6NWY9 871 aaKnown RBP19.42■□□□□ 0.7
UBE3B-201ENST00000340074 ARHGAP27Q6ZUM4 889 aa19.42■□□□□ 0.7
UBE3B-201ENST00000340074 JARID2Q92833 1246 aaPredicted RBP19.42■□□□□ 0.7
UBE3B-201ENST00000340074 IRS4O14654 1257 aaPredicted RBP19.42■□□□□ 0.7
UBE3B-201ENST00000340074 PCCAP05165 728 aaPredicted RBP19.42■□□□□ 0.7
UBE3B-201ENST00000340074 C21orf2O43822 256 aa19.41■□□□□ 0.7
UBE3B-201ENST00000340074 ALDH1B1P30837 517 aa19.41■□□□□ 0.7
UBE3B-201ENST00000340074 LINS1Q8NG48 757 aa19.41■□□□□ 0.7
UBE3B-201ENST00000340074 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
UBE3B-201ENST00000340074 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
UBE3B-201ENST00000340074 RARSP54136 660 aaKnown RBP19.4■□□□□ 0.7
UBE3B-201ENST00000340074 PTPRCP08575 1304 aa19.4■□□□□ 0.7
UBE3B-201ENST00000340074 GCKRQ14397 625 aa19.39■□□□□ 0.69
UBE3B-201ENST00000340074 BEND3Q5T5X7 828 aa19.39■□□□□ 0.69
UBE3B-201ENST00000340074 SLC4A10Q6U841 1118 aa19.39■□□□□ 0.69
UBE3B-201ENST00000340074 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
UBE3B-201ENST00000340074 YY1P25490 414 aa19.38■□□□□ 0.69
UBE3B-201ENST00000340074 CRAMP1Q96RY5 1269 aa19.38■□□□□ 0.69
UBE3B-201ENST00000340074 CDHR2Q9BYE9 1310 aa19.37■□□□□ 0.69
UBE3B-201ENST00000340074 BRPF1P55201 1214 aaPredicted RBP19.37■□□□□ 0.69
UBE3B-201ENST00000340074 DICER1Q9UPY3 1922 aaKnown RBP19.37■□□□□ 0.69
UBE3B-201ENST00000340074 H7C1W4 665 aa19.36■□□□□ 0.69
UBE3B-201ENST00000340074 HSP90B1P14625 803 aaKnown RBP19.36■□□□□ 0.69
UBE3B-201ENST00000340074 SF3B3Q15393 1217 aaKnown RBP19.36■□□□□ 0.69
UBE3B-201ENST00000340074 UBE3BQ7Z3V4 1068 aa19.36■□□□□ 0.69
UBE3B-201ENST00000340074 C7orf43Q8WVR3 580 aa19.36■□□□□ 0.69
UBE3B-201ENST00000340074 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
UBE3B-201ENST00000340074 ABCC4O15439 1325 aa19.35■□□□□ 0.69
UBE3B-201ENST00000340074 PDE8AO60658 829 aa19.35■□□□□ 0.69
UBE3B-201ENST00000340074 OLFM4Q6UX06 510 aa19.35■□□□□ 0.69
UBE3B-201ENST00000340074 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
UBE3B-201ENST00000340074 COL4A1P02462 1669 aa19.35■□□□□ 0.69
UBE3B-201ENST00000340074 RASSF7Q02833 373 aa19.34■□□□□ 0.69
UBE3B-201ENST00000340074 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
UBE3B-201ENST00000340074 NFKBIEO00221 500 aa19.34■□□□□ 0.69
UBE3B-201ENST00000340074 PPEF1O14829 653 aaPredicted RBP19.34■□□□□ 0.69
UBE3B-201ENST00000340074 BCAR3O75815 825 aa19.34■□□□□ 0.69
UBE3B-201ENST00000340074 CASP7P55210 303 aa19.34■□□□□ 0.69
UBE3B-201ENST00000340074 SOGA3Q5TF21 947 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms